RNA–Protein interactions for RNA: ENST00000330687.8

CMTM4-201, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene CMTM4, Length 3,414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-201ENST00000330687 RHOT1Q8IXI2 618 aa21.54■■□□□ 1.04
CMTM4-201ENST00000330687 ATP11CQ8NB49 1132 aa21.54■■□□□ 1.04
CMTM4-201ENST00000330687 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.54■■□□□ 1.04
CMTM4-201ENST00000330687 LMO3Q8TAP4 145 aa21.54■■□□□ 1.04
CMTM4-201ENST00000330687 ZNF398Q8TD17 642 aa21.54■■□□□ 1.04
CMTM4-201ENST00000330687 FAM172AQ8WUF8 416 aa21.54■■□□□ 1.04
CMTM4-201ENST00000330687 MMP19Q99542 508 aa21.54■■□□□ 1.04
CMTM4-201ENST00000330687 E2F8A0AVK6 867 aa21.53■■□□□ 1.04
CMTM4-201ENST00000330687 SERPINB8P50452 374 aa21.53■■□□□ 1.04
CMTM4-201ENST00000330687 PDK1Q15118 436 aa21.53■■□□□ 1.04
CMTM4-201ENST00000330687 FNBP1LQ5T0N5 605 aa21.53■■□□□ 1.04
CMTM4-201ENST00000330687 DPY19L2Q6NUT2 758 aa21.53■■□□□ 1.04
CMTM4-201ENST00000330687 MFSD7Q6UXD7 560 aa21.53■■□□□ 1.04
CMTM4-201ENST00000330687 PPP1R36Q96LQ0 422 aa21.53■■□□□ 1.04
CMTM4-201ENST00000330687 VPS11Q9H270 941 aa21.53■■□□□ 1.04
CMTM4-201ENST00000330687 TLR3O15455 904 aaKnown RBP21.53■■□□□ 1.04
CMTM4-201ENST00000330687 SLC1A1P43005 524 aa21.53■■□□□ 1.04
CMTM4-201ENST00000330687 NFX1Q12986 1120 aaKnown RBP21.53■■□□□ 1.04
CMTM4-201ENST00000330687 SHROOM1Q2M3G4 852 aaPredicted RBP21.53■■□□□ 1.04
CMTM4-201ENST00000330687 MFSD4BQ5TF39 518 aa21.53■■□□□ 1.04
CMTM4-201ENST00000330687 CC2D2BQ6DHV5 1058 aa21.53■■□□□ 1.04
CMTM4-201ENST00000330687 PPP1R18Q6NYC8 613 aa21.53■■□□□ 1.04
CMTM4-201ENST00000330687 POMGNT1Q8WZA1 660 aa21.53■■□□□ 1.04
CMTM4-201ENST00000330687 P2RX7Q99572 595 aaKnown RBP21.53■■□□□ 1.04
CMTM4-201ENST00000330687 PTTG2Q9NZH5 202 aa21.53■■□□□ 1.04
CMTM4-201ENST00000330687 SH3GLB1Q9Y371 365 aa21.53■■□□□ 1.04
CMTM4-201ENST00000330687 C1orf167Q5SNV9 1468 aa21.53■■□□□ 1.04
CMTM4-201ENST00000330687 TBC1D12O60347 775 aa21.52■■□□□ 1.04
CMTM4-201ENST00000330687 ABHD2P08910 425 aa21.52■■□□□ 1.04
CMTM4-201ENST00000330687 RPL5P46777 297 aaKnown RBP21.52■■□□□ 1.04
CMTM4-201ENST00000330687 SMTNL2Q2TAL5 461 aa21.52■■□□□ 1.04
CMTM4-201ENST00000330687 ANKRD20A4Q4UJ75 823 aa21.52■■□□□ 1.04
CMTM4-201ENST00000330687 HSP90AA5PQ58FG0 334 aa21.52■■□□□ 1.04
CMTM4-201ENST00000330687 CRLF3Q8IUI8 442 aa21.52■■□□□ 1.04
CMTM4-201ENST00000330687 DEFB107AQ8IZN7 70 aa21.52■■□□□ 1.04
CMTM4-201ENST00000330687 TRIML2Q8N7C3 387 aa21.52■■□□□ 1.04
CMTM4-201ENST00000330687 NT5C1BQ96P26 610 aa21.52■■□□□ 1.04
CMTM4-201ENST00000330687 WWP1Q9H0M0 922 aa21.52■■□□□ 1.04
CMTM4-201ENST00000330687 TRIM49D1C9J1S8 452 aa21.52■■□□□ 1.04
CMTM4-201ENST00000330687 VILLO15195 856 aa21.52■■□□□ 1.04
CMTM4-201ENST00000330687 CFLARO15519 480 aa21.52■■□□□ 1.04
CMTM4-201ENST00000330687 TOP3BO95985 862 aaKnown RBP21.52■■□□□ 1.04
CMTM4-201ENST00000330687 NAA20P61599 178 aa21.52■■□□□ 1.04
CMTM4-201ENST00000330687 CENPCQ03188 943 aa21.52■■□□□ 1.04
CMTM4-201ENST00000330687 TAS1R2Q8TE23 839 aa21.52■■□□□ 1.04
CMTM4-201ENST00000330687 RABGEF1Q9UJ41 708 aa21.52■■□□□ 1.04
CMTM4-201ENST00000330687 ZNF652Q9Y2D9 606 aa21.52■■□□□ 1.04
CMTM4-201ENST00000330687 GLI3P10071 1580 aa21.52■■□□□ 1.04
CMTM4-201ENST00000330687 F8W8V4 182 aa21.52■■□□□ 1.04
CMTM4-201ENST00000330687 hCG_1984214I3L0E3 225 aa21.52■■□□□ 1.04
CMTM4-201ENST00000330687 MAGEC1O60732 1142 aa21.52■■□□□ 1.04
CMTM4-201ENST00000330687 EIF4BP23588 611 aaKnown RBP21.52■■□□□ 1.04
CMTM4-201ENST00000330687 MYLK3Q32MK0 819 aa21.52■■□□□ 1.04
CMTM4-201ENST00000330687 POLNQ7Z5Q5 900 aa21.52■■□□□ 1.04
CMTM4-201ENST00000330687 AMIGO2Q86SJ2 522 aa21.52■■□□□ 1.04
CMTM4-201ENST00000330687 ZNF713Q8N859 430 aaPredicted RBP21.52■■□□□ 1.04
CMTM4-201ENST00000330687 SLCO2A1Q92959 643 aa21.52■■□□□ 1.04
CMTM4-201ENST00000330687 OLFML3Q9NRN5 406 aa21.52■■□□□ 1.04
CMTM4-201ENST00000330687 ROBO3Q96MS0 1386 aa21.52■■□□□ 1.03
CMTM4-201ENST00000330687 XPOTO43592 962 aaKnown RBP21.51■■□□□ 1.03
CMTM4-201ENST00000330687 SRGAP2CP0DJJ0 459 aa21.51■■□□□ 1.03
CMTM4-201ENST00000330687 SRGAP2BP0DMP2 458 aa21.51■■□□□ 1.03
CMTM4-201ENST00000330687 RXRBP28702 533 aa21.51■■□□□ 1.03
CMTM4-201ENST00000330687 CIITAP33076 1130 aa21.51■■□□□ 1.03
CMTM4-201ENST00000330687 RAP1GDS1P52306 607 aa21.51■■□□□ 1.03
CMTM4-201ENST00000330687 PLOD1Q02809 727 aaPredicted RBP21.51■■□□□ 1.03
CMTM4-201ENST00000330687 SPIRE1Q08AE8 756 aa21.51■■□□□ 1.03
CMTM4-201ENST00000330687 KLHL35Q6PF15 583 aa21.51■■□□□ 1.03
CMTM4-201ENST00000330687 CDHR3Q6ZTQ4 885 aa21.51■■□□□ 1.03
CMTM4-201ENST00000330687 SLC24A2Q9UI40 661 aa21.51■■□□□ 1.03
CMTM4-201ENST00000330687 SOX13Q9UN79 622 aa21.51■■□□□ 1.03
CMTM4-201ENST00000330687 TRIM43BA6NCK2 446 aa21.51■■□□□ 1.03
CMTM4-201ENST00000330687 NDC80O14777 642 aa21.51■■□□□ 1.03
CMTM4-201ENST00000330687 BUD23O43709 281 aaKnown RBP21.51■■□□□ 1.03
CMTM4-201ENST00000330687 KRT81Q14533 505 aa21.51■■□□□ 1.03
CMTM4-201ENST00000330687 TLR1Q15399 786 aa21.51■■□□□ 1.03
CMTM4-201ENST00000330687 BMT2Q1RMZ1 405 aa21.51■■□□□ 1.03
CMTM4-201ENST00000330687 KBTBD12Q3ZCT8 623 aa21.51■■□□□ 1.03
CMTM4-201ENST00000330687 RNF111Q6ZNA4 994 aa21.51■■□□□ 1.03
CMTM4-201ENST00000330687 BANPQ8N9N5 519 aa21.51■■□□□ 1.03
CMTM4-201ENST00000330687 RSAD2Q8WXG1 361 aa21.51■■□□□ 1.03
CMTM4-201ENST00000330687 E2F7Q96AV8 911 aa21.51■■□□□ 1.03
CMTM4-201ENST00000330687 SRPK1Q96SB4 655 aaKnown RBP21.51■■□□□ 1.03
CMTM4-201ENST00000330687 CACNA1SQ13698 1873 aa21.51■■□□□ 1.03
CMTM4-201ENST00000330687 CLUHO75153 1309 aa21.51■■□□□ 1.03
CMTM4-201ENST00000330687 DENND3A2RUS2 1198 aa21.51■■□□□ 1.03
CMTM4-201ENST00000330687 GAS7O60861 476 aa21.51■■□□□ 1.03
CMTM4-201ENST00000330687 FKBP6O75344 327 aa21.51■■□□□ 1.03
CMTM4-201ENST00000330687 STT3AP46977 705 aa21.51■■□□□ 1.03
CMTM4-201ENST00000330687 KRT72Q14CN4 511 aa21.51■■□□□ 1.03
CMTM4-201ENST00000330687 FAM71AQ8IYT1 594 aa21.51■■□□□ 1.03
CMTM4-201ENST00000330687 FAM81BQ96LP2 452 aa21.51■■□□□ 1.03
CMTM4-201ENST00000330687 TRIM56Q9BRZ2 755 aaKnown RBP21.51■■□□□ 1.03
CMTM4-201ENST00000330687 HSPBP1Q9NZL4 362 aa21.51■■□□□ 1.03
CMTM4-201ENST00000330687 TMEM150BA6NC51 233 aa21.5■■□□□ 1.03
CMTM4-201ENST00000330687 F5H6K3 240 aa21.5■■□□□ 1.03
CMTM4-201ENST00000330687 PDLIM1O00151 329 aa21.5■■□□□ 1.03
CMTM4-201ENST00000330687 KLRC2P26717 231 aa21.5■■□□□ 1.03
CMTM4-201ENST00000330687 MLH1P40692 756 aa21.5■■□□□ 1.03
CMTM4-201ENST00000330687 C6orf52Q5T4I8 152 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms