RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 C12orf50Q8NA57 414 aaPredicted RBP12.41□□□□□ -0.42
SHMT2-201ENST00000328923 ZNF280CQ8ND82 737 aa12.41□□□□□ -0.42
SHMT2-201ENST00000328923 PDZD8Q8NEN9 1154 aa12.41□□□□□ -0.42
SHMT2-201ENST00000328923 TMIGD2Q96BF3 282 aa12.41□□□□□ -0.42
SHMT2-201ENST00000328923 HES6Q96HZ4 224 aa12.41□□□□□ -0.42
SHMT2-201ENST00000328923 BLOC1S4Q9NUP1 217 aa12.41□□□□□ -0.42
SHMT2-201ENST00000328923 GPRC5DQ9NZD1 345 aa12.41□□□□□ -0.42
SHMT2-201ENST00000328923 ERVK-11Q9UQG0 969 aa12.41□□□□□ -0.42
SHMT2-201ENST00000328923 TNRC6CQ9HCJ0 1690 aaKnown RBP12.4□□□□□ -0.42
SHMT2-201ENST00000328923 SMIM22K7EJ46 135 aa12.4□□□□□ -0.42
SHMT2-201ENST00000328923 TMCC2O75069 709 aa12.4□□□□□ -0.42
SHMT2-201ENST00000328923 STAM2O75886 525 aa12.4□□□□□ -0.42
SHMT2-201ENST00000328923 THRAP10827 490 aa12.4□□□□□ -0.42
SHMT2-201ENST00000328923 GLULP15104 373 aa12.4□□□□□ -0.42
SHMT2-201ENST00000328923 MUTP22033 750 aa12.4□□□□□ -0.42
SHMT2-201ENST00000328923 TM4SF1P30408 202 aa12.4□□□□□ -0.42
SHMT2-201ENST00000328923 HMOX2P30519 316 aa12.4□□□□□ -0.42
SHMT2-201ENST00000328923 CIITAP33076 1130 aa12.4□□□□□ -0.42
SHMT2-201ENST00000328923 MYBPC1Q00872 1141 aa12.4□□□□□ -0.42
SHMT2-201ENST00000328923 KCNC4Q03721 635 aa12.4□□□□□ -0.42
SHMT2-201ENST00000328923 GRM4Q14833 912 aa12.4□□□□□ -0.42
SHMT2-201ENST00000328923 TMCO4Q5TGY1 634 aa12.4□□□□□ -0.42
SHMT2-201ENST00000328923 RGS9BPQ6ZS82 235 aa12.4□□□□□ -0.42
SHMT2-201ENST00000328923 RHOT2Q8IXI1 618 aa12.4□□□□□ -0.42
SHMT2-201ENST00000328923 CPNE9Q8IYJ1 553 aa12.4□□□□□ -0.42
SHMT2-201ENST00000328923 LARP4BQ92615 738 aaKnown RBP12.4□□□□□ -0.42
SHMT2-201ENST00000328923 FAM84BQ96KN1 310 aaPredicted RBP12.4□□□□□ -0.42
SHMT2-201ENST00000328923 RUNDC3BQ96NL0 473 aa12.4□□□□□ -0.42
SHMT2-201ENST00000328923 PALMDQ9NP74 551 aa12.4□□□□□ -0.42
SHMT2-201ENST00000328923 ARHGEF4Q9NR80 690 aa12.4□□□□□ -0.42
SHMT2-201ENST00000328923 SLC7A8Q9UHI5 535 aa12.4□□□□□ -0.42
SHMT2-201ENST00000328923 EMSYQ7Z589 1322 aa12.4□□□□□ -0.42
SHMT2-201ENST00000328923 A0A0G2JND7 137 aa12.4□□□□□ -0.42
SHMT2-201ENST00000328923 ZBED4O75132 1171 aa12.4□□□□□ -0.42
SHMT2-201ENST00000328923 BAIAP3O94812 1187 aa12.4□□□□□ -0.42
SHMT2-201ENST00000328923 DDHD2O94830 711 aa12.4□□□□□ -0.42
SHMT2-201ENST00000328923 MSL3P1P0C860 447 aa12.4□□□□□ -0.42
SHMT2-201ENST00000328923 PTGIRP43119 386 aa12.4□□□□□ -0.42
SHMT2-201ENST00000328923 ADAM17P78536 824 aa12.4□□□□□ -0.42
SHMT2-201ENST00000328923 GRB10Q13322 594 aa12.4□□□□□ -0.42
SHMT2-201ENST00000328923 ZNF211Q13398 564 aaPredicted RBP12.4□□□□□ -0.42
SHMT2-201ENST00000328923 APOFQ13790 326 aa12.4□□□□□ -0.42
SHMT2-201ENST00000328923 DHX34Q14147 1143 aaKnown RBP12.4□□□□□ -0.42
SHMT2-201ENST00000328923 LPCAT2Q7L5N7 544 aa12.4□□□□□ -0.42
SHMT2-201ENST00000328923 PRUNE1Q86TP1 453 aa12.4□□□□□ -0.42
SHMT2-201ENST00000328923 TTC7BQ86TV6 843 aa12.4□□□□□ -0.42
SHMT2-201ENST00000328923 NT5DC3Q86UY8 548 aa12.4□□□□□ -0.42
SHMT2-201ENST00000328923 ULK2Q8IYT8 1036 aa12.4□□□□□ -0.42
SHMT2-201ENST00000328923 CACTIN-AS1Q8N1I8 211 aa12.4□□□□□ -0.42
SHMT2-201ENST00000328923 PPM1KQ8N3J5 372 aa12.4□□□□□ -0.42
SHMT2-201ENST00000328923 MARVELD2Q8N4S9 558 aa12.4□□□□□ -0.42
SHMT2-201ENST00000328923 DCLK2Q8N568 766 aa12.4□□□□□ -0.42
SHMT2-201ENST00000328923 ALLCQ8N6M5 410 aa12.4□□□□□ -0.42
SHMT2-201ENST00000328923 EXD1Q8NHP7 514 aa12.4□□□□□ -0.42
SHMT2-201ENST00000328923 CHPT1Q8WUD6 406 aa12.4□□□□□ -0.42
SHMT2-201ENST00000328923 S100A14Q9HCY8 104 aa12.4□□□□□ -0.42
SHMT2-201ENST00000328923 ZMAT5Q9UDW3 170 aaKnown RBP12.4□□□□□ -0.42
SHMT2-201ENST00000328923 CYP2D7A0A087X1C5 515 aa12.39□□□□□ -0.43
SHMT2-201ENST00000328923 A0A1B0GTW7 788 aa12.39□□□□□ -0.43
SHMT2-201ENST00000328923 A0A1W2PRG0 241 aa12.39□□□□□ -0.43
SHMT2-201ENST00000328923 B2RBV5 119 aa12.39□□□□□ -0.43
SHMT2-201ENST00000328923 H3BRJ5 948 aa12.39□□□□□ -0.43
SHMT2-201ENST00000328923 MAGEC1O60732 1142 aa12.39□□□□□ -0.43
SHMT2-201ENST00000328923 FARP2O94887 1054 aaPredicted RBP12.39□□□□□ -0.43
SHMT2-201ENST00000328923 KRT75O95678 551 aa12.39□□□□□ -0.43
SHMT2-201ENST00000328923 CDK9P50750 372 aaKnown RBP12.39□□□□□ -0.43
SHMT2-201ENST00000328923 C21orf59P57076 290 aa12.39□□□□□ -0.43
SHMT2-201ENST00000328923 NFIXQ14938 502 aa12.39□□□□□ -0.43
SHMT2-201ENST00000328923 ZNF568Q3ZCX4 644 aa12.39□□□□□ -0.43
SHMT2-201ENST00000328923 C6orf163Q5TEZ5 329 aa12.39□□□□□ -0.43
SHMT2-201ENST00000328923 PCNX4Q63HM2 1172 aa12.39□□□□□ -0.43
SHMT2-201ENST00000328923 CCDC62Q6P9F0 684 aa12.39□□□□□ -0.43
SHMT2-201ENST00000328923 AMIGO2Q86SJ2 522 aa12.39□□□□□ -0.43
SHMT2-201ENST00000328923 DGKHQ86XP1 1220 aa12.39□□□□□ -0.43
SHMT2-201ENST00000328923 ZC3H3Q8IXZ2 948 aaKnown RBP12.39□□□□□ -0.43
SHMT2-201ENST00000328923 Q8N9G6 341 aaPredicted RBP12.39□□□□□ -0.43
SHMT2-201ENST00000328923 HELQQ8TDG4 1101 aa12.39□□□□□ -0.43
SHMT2-201ENST00000328923 C7orf43Q8WVR3 580 aa12.39□□□□□ -0.43
SHMT2-201ENST00000328923 BORCS5Q969J3 196 aa12.39□□□□□ -0.43
SHMT2-201ENST00000328923 THTPAQ9BU02 230 aa12.39□□□□□ -0.43
SHMT2-201ENST00000328923 TUBB6Q9BUF5 446 aa12.39□□□□□ -0.43
SHMT2-201ENST00000328923 PDGFDQ9GZP0 370 aaPredicted RBP12.39□□□□□ -0.43
SHMT2-201ENST00000328923 PARVGQ9HBI0 331 aa12.39□□□□□ -0.43
SHMT2-201ENST00000328923 GPAMQ9HCL2 828 aa12.39□□□□□ -0.43
SHMT2-201ENST00000328923 OLFML3Q9NRN5 406 aa12.39□□□□□ -0.43
SHMT2-201ENST00000328923 PLK2Q9NYY3 685 aa12.39□□□□□ -0.43
SHMT2-201ENST00000328923 NAGPAQ9UK23 515 aa12.39□□□□□ -0.43
SHMT2-201ENST00000328923 NAALADL1Q9UQQ1 740 aa12.39□□□□□ -0.43
SHMT2-201ENST00000328923 DNAJC16Q9Y2G8 782 aa12.39□□□□□ -0.43
SHMT2-201ENST00000328923 RABGAP1Q9Y3P9 1069 aa12.39□□□□□ -0.43
SHMT2-201ENST00000328923 CAPN8A6NHC0 703 aa12.39□□□□□ -0.43
SHMT2-201ENST00000328923 PIK3CDO00329 1044 aa12.39□□□□□ -0.43
SHMT2-201ENST00000328923 CYP26A1O43174 497 aa12.39□□□□□ -0.43
SHMT2-201ENST00000328923 ADRA2BP18089 450 aa12.39□□□□□ -0.43
SHMT2-201ENST00000328923 FXR2P51116 673 aaKnown RBP eCLIP12.39□□□□□ -0.43
SHMT2-201ENST00000328923 NR1H2P55055 460 aa12.39□□□□□ -0.43
SHMT2-201ENST00000328923 RASA2Q15283 850 aa12.39□□□□□ -0.43
SHMT2-201ENST00000328923 TRIP10Q15642 601 aa12.39□□□□□ -0.43
SHMT2-201ENST00000328923 PDK4Q16654 411 aa12.39□□□□□ -0.43
SHMT2-201ENST00000328923 IRF2BP2Q7Z5L9 587 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms