RNA–Protein interactions for RNA: ENST00000328159.8

TPM3-205, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,771 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-205ENST00000328159 DDX20Q9UHI6 824 aaKnown RBP15.76■□□□□ 0.11
TPM3-205ENST00000328159 A8MXQ7 604 aa15.75■□□□□ 0.11
TPM3-205ENST00000328159 PODXLO00592 558 aa15.75■□□□□ 0.11
TPM3-205ENST00000328159 GPR182O15218 404 aa15.75■□□□□ 0.11
TPM3-205ENST00000328159 POLR3GO15318 223 aaPredicted RBP15.75■□□□□ 0.11
TPM3-205ENST00000328159 KRT1P04264 644 aa15.75■□□□□ 0.11
TPM3-205ENST00000328159 SETSIPP0DME0 302 aa15.75■□□□□ 0.11
TPM3-205ENST00000328159 LRPAP1P30533 357 aa15.75■□□□□ 0.11
TPM3-205ENST00000328159 CETN2P41208 172 aa15.75■□□□□ 0.11
TPM3-205ENST00000328159 PKDCCQ504Y2 493 aa15.75■□□□□ 0.11
TPM3-205ENST00000328159 LIMS2Q7Z4I7 341 aa15.75■□□□□ 0.11
TPM3-205ENST00000328159 RNF180Q86T96 592 aa15.75■□□□□ 0.11
TPM3-205ENST00000328159 CCDC105Q8IYK2 499 aa15.75■□□□□ 0.11
TPM3-205ENST00000328159 KBTBD7Q8WVZ9 684 aa15.75■□□□□ 0.11
TPM3-205ENST00000328159 C1orf54Q8WWF1 131 aa15.75■□□□□ 0.11
TPM3-205ENST00000328159 RBM41Q96IZ5 413 aaKnown RBP15.75■□□□□ 0.11
TPM3-205ENST00000328159 OSBPL8Q9BZF1 889 aa15.75■□□□□ 0.11
TPM3-205ENST00000328159 MIS12Q9H081 205 aa15.75■□□□□ 0.11
TPM3-205ENST00000328159 CREBZFQ9NS37 354 aa15.75■□□□□ 0.11
TPM3-205ENST00000328159 FAM49BQ9NUQ9 324 aa15.75■□□□□ 0.11
TPM3-205ENST00000328159 GOLGA6BA6NDN3 693 aa15.75■□□□□ 0.11
TPM3-205ENST00000328159 CABYRO75952 493 aa15.75■□□□□ 0.11
TPM3-205ENST00000328159 FGFR1P11362 822 aa15.75■□□□□ 0.11
TPM3-205ENST00000328159 GNL1P36915 607 aaPredicted RBP15.75■□□□□ 0.11
TPM3-205ENST00000328159 KLF1Q13351 362 aaPredicted RBP15.75■□□□□ 0.11
TPM3-205ENST00000328159 ATP13A4Q4VNC1 1196 aa15.75■□□□□ 0.11
TPM3-205ENST00000328159 ALS2CLQ60I27 953 aa15.75■□□□□ 0.11
TPM3-205ENST00000328159 ARHGAP17Q68EM7 881 aa15.75■□□□□ 0.11
TPM3-205ENST00000328159 TTC30AQ86WT1 665 aa15.75■□□□□ 0.11
TPM3-205ENST00000328159 APPL2Q8NEU8 664 aa15.75■□□□□ 0.11
TPM3-205ENST00000328159 FAM71BQ8TC56 605 aa15.75■□□□□ 0.11
TPM3-205ENST00000328159 RNF25Q96BH1 459 aaPredicted RBP15.75■□□□□ 0.11
TPM3-205ENST00000328159 ZFP42Q96MM3 310 aa15.75■□□□□ 0.11
TPM3-205ENST00000328159 HEMGNQ9BXL5 484 aa15.75■□□□□ 0.11
TPM3-205ENST00000328159 SNX25Q9H3E2 840 aa15.75■□□□□ 0.11
TPM3-205ENST00000328159 DPEP3Q9H4B8 488 aa15.75■□□□□ 0.11
TPM3-205ENST00000328159 AGO3Q9H9G7 860 aaKnown RBP15.75■□□□□ 0.11
TPM3-205ENST00000328159 DDX56Q9NY93 547 aaKnown RBP15.75■□□□□ 0.11
TPM3-205ENST00000328159 HESX1Q9UBX0 185 aa15.75■□□□□ 0.11
TPM3-205ENST00000328159 MEIS3P2A8K0S8 358 aa15.74■□□□□ 0.11
TPM3-205ENST00000328159 HUS1O60921 280 aa15.74■□□□□ 0.11
TPM3-205ENST00000328159 GGCXP38435 758 aa15.74■□□□□ 0.11
TPM3-205ENST00000328159 HSPA9P38646 679 aaKnown RBP15.74■□□□□ 0.11
TPM3-205ENST00000328159 DRG2P55039 364 aaKnown RBP15.74■□□□□ 0.11
TPM3-205ENST00000328159 LILRA4P59901 499 aa15.74■□□□□ 0.11
TPM3-205ENST00000328159 FAM193AP78312 1265 aa15.74■□□□□ 0.11
TPM3-205ENST00000328159 PTK7Q13308 1070 aa15.74■□□□□ 0.11
TPM3-205ENST00000328159 ITGA7Q13683 1181 aa15.74■□□□□ 0.11
TPM3-205ENST00000328159 FAM102AQ5T9C2 384 aaPredicted RBP15.74■□□□□ 0.11
TPM3-205ENST00000328159 OR6B2Q6IFH4 312 aa15.74■□□□□ 0.11
TPM3-205ENST00000328159 CRYBG2Q8N1P7 616 aa15.74■□□□□ 0.11
TPM3-205ENST00000328159 EMC1Q8N766 993 aa15.74■□□□□ 0.11
TPM3-205ENST00000328159 RAET1EQ8TD07 263 aa15.74■□□□□ 0.11
TPM3-205ENST00000328159 SLITRK1Q96PX8 696 aa15.74■□□□□ 0.11
TPM3-205ENST00000328159 OSBPL7Q9BZF2 842 aa15.74■□□□□ 0.11
TPM3-205ENST00000328159 DCLK3Q9C098 648 aa15.74■□□□□ 0.11
TPM3-205ENST00000328159 DNAI2Q9GZS0 605 aa15.74■□□□□ 0.11
TPM3-205ENST00000328159 SLC38A7Q9NVC3 462 aa15.74■□□□□ 0.11
TPM3-205ENST00000328159 KLHL11Q9NVR0 708 aa15.74■□□□□ 0.11
TPM3-205ENST00000328159 E5RJQ4 531 aa15.73■□□□□ 0.11
TPM3-205ENST00000328159 PI4K2BG5E9Z4 385 aa15.73■□□□□ 0.11
TPM3-205ENST00000328159 AGPSO00116 658 aa15.73■□□□□ 0.11
TPM3-205ENST00000328159 HCRTO43612 131 aa15.73■□□□□ 0.11
TPM3-205ENST00000328159 HSF2BPO75031 334 aa15.73■□□□□ 0.11
TPM3-205ENST00000328159 SYF2O95926 243 aaKnown RBP15.73■□□□□ 0.11
TPM3-205ENST00000328159 PDGFRBP09619 1106 aa15.73■□□□□ 0.11
TPM3-205ENST00000328159 CD52P31358 61 aa15.73■□□□□ 0.11
TPM3-205ENST00000328159 MLH1P40692 756 aa15.73■□□□□ 0.11
TPM3-205ENST00000328159 KCNJ1P48048 391 aa15.73■□□□□ 0.11
TPM3-205ENST00000328159 RGS7P49802 495 aa15.73■□□□□ 0.11
TPM3-205ENST00000328159 ACLYP53396 1101 aa15.73■□□□□ 0.11
TPM3-205ENST00000328159 GABPB1Q06547 395 aaPredicted RBP15.73■□□□□ 0.11
TPM3-205ENST00000328159 SNX1Q13596 522 aa15.73■□□□□ 0.11
TPM3-205ENST00000328159 ZFYVE27Q5T4F4 411 aa15.73■□□□□ 0.11
TPM3-205ENST00000328159 TXNRD3NBQ6F5E7 133 aa15.73■□□□□ 0.11
TPM3-205ENST00000328159 FAM183BPQ6ZVS7 135 aa15.73■□□□□ 0.11
TPM3-205ENST00000328159 POLNQ7Z5Q5 900 aa15.73■□□□□ 0.11
TPM3-205ENST00000328159 ANKS1BQ7Z6G8 1248 aa15.73■□□□□ 0.11
TPM3-205ENST00000328159 MRPL10Q7Z7H8 261 aaKnown RBP15.73■□□□□ 0.11
TPM3-205ENST00000328159 TOP6BLQ8N6T0 577 aa15.73■□□□□ 0.11
TPM3-205ENST00000328159 SLCO2A1Q92959 643 aa15.73■□□□□ 0.11
TPM3-205ENST00000328159 LPPQ93052 612 aa15.73■□□□□ 0.11
TPM3-205ENST00000328159 GAD1Q99259 594 aa15.73■□□□□ 0.11
TPM3-205ENST00000328159 LPIN3Q9BQK8 851 aa15.73■□□□□ 0.11
TPM3-205ENST00000328159 SLC4A5Q9BY07 1137 aa15.73■□□□□ 0.11
TPM3-205ENST00000328159 CHST7Q9NS84 486 aa15.73■□□□□ 0.11
TPM3-205ENST00000328159 HOMER3Q9NSC5 361 aa15.73■□□□□ 0.11
TPM3-205ENST00000328159 PADI3Q9ULW8 664 aa15.73■□□□□ 0.11
TPM3-205ENST00000328159 SNX24Q9Y343 169 aa15.73■□□□□ 0.11
TPM3-205ENST00000328159 TULP2O00295 520 aa15.72■□□□□ 0.11
TPM3-205ENST00000328159 PIK3R2O00459 728 aa15.72■□□□□ 0.11
TPM3-205ENST00000328159 LRCH4O75427 683 aa15.72■□□□□ 0.11
TPM3-205ENST00000328159 ECEL1O95672 775 aa15.72■□□□□ 0.11
TPM3-205ENST00000328159 GHRP10912 638 aa15.72■□□□□ 0.11
TPM3-205ENST00000328159 WARSP23381 471 aaKnown RBP15.72■□□□□ 0.11
TPM3-205ENST00000328159 LMO2P25791 158 aa15.72■□□□□ 0.11
TPM3-205ENST00000328159 COPS2P61201 443 aa15.72■□□□□ 0.11
TPM3-205ENST00000328159 HADHQ16836 314 aaKnown RBP15.72■□□□□ 0.11
TPM3-205ENST00000328159 ODF2Q5BJF6 829 aa15.72■□□□□ 0.11
TPM3-205ENST00000328159 FAM26DQ5JW98 314 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms