RNA–Protein interactions for RNA: ENST00000327908.3

LRIT3-201, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

TSL 2 BASIC

Gene LRIT3, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-201ENST00000327908 IBSPP21815 317 aaPredicted RBP5.47□□□□□ -1.53
LRIT3-201ENST00000327908 FECHP22830 423 aa5.47□□□□□ -1.53
LRIT3-201ENST00000327908 GBP1P32455 592 aa5.47□□□□□ -1.53
LRIT3-201ENST00000327908 NDST1P52848 882 aa5.47□□□□□ -1.53
LRIT3-201ENST00000327908 AIF1P55008 147 aa5.47□□□□□ -1.53
LRIT3-201ENST00000327908 SOX4Q06945 474 aaPredicted RBP5.47□□□□□ -1.53
LRIT3-201ENST00000327908 ZNF268Q14587 947 aaPredicted RBP5.47□□□□□ -1.53
LRIT3-201ENST00000327908 SOWAHAQ2M3V2 549 aa5.47□□□□□ -1.53
LRIT3-201ENST00000327908 CYP4A22Q5TCH4 519 aa5.47□□□□□ -1.53
LRIT3-201ENST00000327908 FAM117BQ6P1L5 589 aa5.47□□□□□ -1.53
LRIT3-201ENST00000327908 APTXQ7Z2E3 356 aaKnown RBP5.47□□□□□ -1.53
LRIT3-201ENST00000327908 ZNF280BQ86YH2 543 aa5.47□□□□□ -1.53
LRIT3-201ENST00000327908 SIX6OS1Q8N1H7 587 aa5.47□□□□□ -1.53
LRIT3-201ENST00000327908 PLCD3Q8N3E9 789 aa5.47□□□□□ -1.53
LRIT3-201ENST00000327908 RNF214Q8ND24 703 aa5.47□□□□□ -1.53
LRIT3-201ENST00000327908 LNX1Q8TBB1 728 aaPredicted RBP5.47□□□□□ -1.53
LRIT3-201ENST00000327908 PLEKHO2Q8TD55 490 aa5.47□□□□□ -1.53
LRIT3-201ENST00000327908 DUSP16Q9BY84 665 aa5.47□□□□□ -1.53
LRIT3-201ENST00000327908 NR2E1Q9Y466 385 aa5.47□□□□□ -1.53
LRIT3-201ENST00000327908 ARHGAP6O43182 974 aa5.47□□□□□ -1.53
LRIT3-201ENST00000327908 ZSCAN12O43309 604 aa5.47□□□□□ -1.53
LRIT3-201ENST00000327908 LILRB3O75022 631 aa5.47□□□□□ -1.53
LRIT3-201ENST00000327908 TCF3P15923 654 aa5.47□□□□□ -1.53
LRIT3-201ENST00000327908 NPR3P17342 541 aa5.47□□□□□ -1.53
LRIT3-201ENST00000327908 CETN2P41208 172 aa5.47□□□□□ -1.53
LRIT3-201ENST00000327908 NSFP46459 744 aaKnown RBP5.47□□□□□ -1.53
LRIT3-201ENST00000327908 TCTN1Q2MV58 587 aa5.47□□□□□ -1.53
LRIT3-201ENST00000327908 TDRD12Q587J7 1177 aaKnown RBP5.47□□□□□ -1.53
LRIT3-201ENST00000327908 TMEM270Q6UE05 265 aa5.47□□□□□ -1.53
LRIT3-201ENST00000327908 FAM35AQ86V20 835 aa5.47□□□□□ -1.53
LRIT3-201ENST00000327908 RHOT2Q8IXI1 618 aa5.47□□□□□ -1.53
LRIT3-201ENST00000327908 CCDC42Q96M95 316 aa5.47□□□□□ -1.53
LRIT3-201ENST00000327908 TTLL2Q9BWV7 592 aa5.47□□□□□ -1.53
LRIT3-201ENST00000327908 STAP1Q9ULZ2 295 aa5.47□□□□□ -1.53
LRIT3-201ENST00000327908 KIAA1671Q9BY89 1806 aa5.47□□□□□ -1.53
LRIT3-201ENST00000327908 C2orf71A6NGG8 1288 aa5.47□□□□□ -1.53
LRIT3-201ENST00000327908 KIF2AO00139 706 aaPredicted RBP5.47□□□□□ -1.53
LRIT3-201ENST00000327908 SLC9A3R1O14745 358 aaPredicted RBP5.47□□□□□ -1.53
LRIT3-201ENST00000327908 RTN2O75298 545 aa5.47□□□□□ -1.53
LRIT3-201ENST00000327908 ADCY5O95622 1261 aa5.47□□□□□ -1.53
LRIT3-201ENST00000327908 F9P00740 461 aa5.47□□□□□ -1.53
LRIT3-201ENST00000327908 PTPN2P17706 415 aa5.47□□□□□ -1.53
LRIT3-201ENST00000327908 TKTP29401 623 aaKnown RBP5.47□□□□□ -1.53
LRIT3-201ENST00000327908 USP8P40818 1118 aa5.47□□□□□ -1.53
LRIT3-201ENST00000327908 PLA2G4AP47712 749 aa5.47□□□□□ -1.53
LRIT3-201ENST00000327908 OXCT1P55809 520 aa5.47□□□□□ -1.53
LRIT3-201ENST00000327908 DLG4P78352 724 aa5.47□□□□□ -1.53
LRIT3-201ENST00000327908 TBX2Q13207 712 aaPredicted RBP5.47□□□□□ -1.53
LRIT3-201ENST00000327908 TCEAL1Q15170 157 aa5.47□□□□□ -1.53
LRIT3-201ENST00000327908 SEZ6Q53EL9 994 aa5.47□□□□□ -1.53
LRIT3-201ENST00000327908 MTSS1LQ765P7 747 aa5.47□□□□□ -1.53
LRIT3-201ENST00000327908 RRAGAQ7L523 313 aa5.47□□□□□ -1.53
LRIT3-201ENST00000327908 CEP57Q86XR8 500 aa5.47□□□□□ -1.53
LRIT3-201ENST00000327908 KREMEN2Q8NCW0 462 aa5.47□□□□□ -1.53
LRIT3-201ENST00000327908 SLC22A17Q8WUG5 538 aa5.47□□□□□ -1.53
LRIT3-201ENST00000327908 AGPAT1Q99943 283 aa5.47□□□□□ -1.53
LRIT3-201ENST00000327908 SYNCQ9H7C4 482 aa5.47□□□□□ -1.53
LRIT3-201ENST00000327908 CSNK1G1Q9HCP0 422 aa5.47□□□□□ -1.53
LRIT3-201ENST00000327908 SIX2Q9NPC8 291 aa5.47□□□□□ -1.53
LRIT3-201ENST00000327908 TLR8Q9NR97 1041 aaKnown RBP5.47□□□□□ -1.53
LRIT3-201ENST00000327908 TRPM5Q9NZQ8 1165 aa5.47□□□□□ -1.53
LRIT3-201ENST00000327908 UVRAGQ9P2Y5 699 aa5.47□□□□□ -1.53
LRIT3-201ENST00000327908 SLC12A6Q9UHW9 1150 aa5.47□□□□□ -1.53
LRIT3-201ENST00000327908 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.47□□□□□ -1.53
LRIT3-201ENST00000327908 A0A0A6YYK5 440 aaPredicted RBP5.46□□□□□ -1.53
LRIT3-201ENST00000327908 BTNL10A8MVZ5 291 aa5.46□□□□□ -1.53
LRIT3-201ENST00000327908 AKR1B10O60218 316 aa5.46□□□□□ -1.53
LRIT3-201ENST00000327908 ACO1P21399 889 aaKnown RBP5.46□□□□□ -1.53
LRIT3-201ENST00000327908 KCNMA1Q12791 1236 aa5.46□□□□□ -1.53
LRIT3-201ENST00000327908 COL19A1Q14993 1142 aa5.46□□□□□ -1.53
LRIT3-201ENST00000327908 KLHDC10Q6PID8 442 aa5.46□□□□□ -1.53
LRIT3-201ENST00000327908 ZNF662Q6ZS27 426 aa5.46□□□□□ -1.53
LRIT3-201ENST00000327908 SND1Q7KZF4 910 aaKnown RBP eCLIP5.46□□□□□ -1.53
LRIT3-201ENST00000327908 PHF13Q86YI8 300 aaPredicted RBP5.46□□□□□ -1.53
LRIT3-201ENST00000327908 NUP93Q8N1F7 819 aa5.46□□□□□ -1.53
LRIT3-201ENST00000327908 ARNTL2Q8WYA1 636 aa5.46□□□□□ -1.53
LRIT3-201ENST00000327908 MRPS31Q92665 395 aaKnown RBP5.46□□□□□ -1.53
LRIT3-201ENST00000327908 SEMA4DQ92854 862 aa5.46□□□□□ -1.53
LRIT3-201ENST00000327908 MYLPFQ96A32 169 aa5.46□□□□□ -1.53
LRIT3-201ENST00000327908 PABPC5Q96DU9 382 aaKnown RBP5.46□□□□□ -1.53
LRIT3-201ENST00000327908 CYFIP2Q96F07 1278 aa5.46□□□□□ -1.53
LRIT3-201ENST00000327908 TTYH3Q9C0H2 523 aa5.46□□□□□ -1.53
LRIT3-201ENST00000327908 SMYD3Q9H7B4 428 aa5.46□□□□□ -1.53
LRIT3-201ENST00000327908 WDR6Q9NNW5 1121 aaKnown RBP5.46□□□□□ -1.53
LRIT3-201ENST00000327908 FAM207AQ9NSI2 230 aaPredicted RBP5.46□□□□□ -1.53
LRIT3-201ENST00000327908 HAUS2Q9NVX0 235 aa5.46□□□□□ -1.53
LRIT3-201ENST00000327908 CLIC5Q9NZA1 410 aa5.46□□□□□ -1.53
LRIT3-201ENST00000327908 DNAJB4Q9UDY4 337 aa5.46□□□□□ -1.53
LRIT3-201ENST00000327908 PRKAG3Q9UGI9 489 aa5.46□□□□□ -1.53
LRIT3-201ENST00000327908 YBX2Q9Y2T7 364 aaKnown RBP5.46□□□□□ -1.53
LRIT3-201ENST00000327908 FHOD1Q9Y613 1164 aa5.46□□□□□ -1.53
LRIT3-201ENST00000327908 MTMR11A4FU01 709 aa5.46□□□□□ -1.54
LRIT3-201ENST00000327908 O00370 1275 aa5.46□□□□□ -1.54
LRIT3-201ENST00000327908 CLASP2O75122 1294 aaKnown RBP5.46□□□□□ -1.54
LRIT3-201ENST00000327908 AP1G2O75843 785 aa5.46□□□□□ -1.54
LRIT3-201ENST00000327908 SLC9A1P19634 815 aa5.46□□□□□ -1.54
LRIT3-201ENST00000327908 CA8P35219 290 aa5.46□□□□□ -1.54
LRIT3-201ENST00000327908 BRCC3P46736 316 aa5.46□□□□□ -1.54
LRIT3-201ENST00000327908 RAD23BP54727 409 aa5.46□□□□□ -1.54
LRIT3-201ENST00000327908 AMPD2Q01433 879 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms