RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 ATP13A4Q4VNC1 1196 aa13.39□□□□□ -0.27
CCDC60-201ENST00000327554 KAZNQ674X7 775 aa13.39□□□□□ -0.27
CCDC60-201ENST00000327554 FBXL19Q6PCT2 694 aa13.39□□□□□ -0.27
CCDC60-201ENST00000327554 C3orf62Q6ZUJ4 267 aa13.39□□□□□ -0.27
CCDC60-201ENST00000327554 SMIM5Q71RC9 77 aa13.39□□□□□ -0.27
CCDC60-201ENST00000327554 PRPF39Q86UA1 669 aaKnown RBP13.39□□□□□ -0.27
CCDC60-201ENST00000327554 PYROXD1Q8WU10 500 aa13.39□□□□□ -0.27
CCDC60-201ENST00000327554 IRGQQ8WZA9 623 aa13.39□□□□□ -0.27
CCDC60-201ENST00000327554 AMNQ9BXJ7 453 aa13.39□□□□□ -0.27
CCDC60-201ENST00000327554 KLHL4Q9C0H6 718 aa13.39□□□□□ -0.27
CCDC60-201ENST00000327554 NYXQ9GZU5 481 aa13.39□□□□□ -0.27
CCDC60-201ENST00000327554 C1orf21Q9H246 121 aa13.39□□□□□ -0.27
CCDC60-201ENST00000327554 TMEM206Q9H813 350 aa13.39□□□□□ -0.27
CCDC60-201ENST00000327554 CD209Q9NNX6 404 aa13.39□□□□□ -0.27
CCDC60-201ENST00000327554 DDX4Q9NQI0 724 aaKnown RBP13.39□□□□□ -0.27
CCDC60-201ENST00000327554 SERPINB13Q9UIV8 391 aa13.39□□□□□ -0.27
CCDC60-201ENST00000327554 DRG1Q9Y295 367 aaKnown RBP13.39□□□□□ -0.27
CCDC60-201ENST00000327554 GOLGA8IPA6NC78 632 aa13.38□□□□□ -0.27
CCDC60-201ENST00000327554 GOLGA8JA6NMD2 632 aa13.38□□□□□ -0.27
CCDC60-201ENST00000327554 MT-ND3P03897 115 aa13.38□□□□□ -0.27
CCDC60-201ENST00000327554 EEF2P13639 858 aaKnown RBP13.38□□□□□ -0.27
CCDC60-201ENST00000327554 PEX2P28328 305 aa13.38□□□□□ -0.27
CCDC60-201ENST00000327554 PRELPP51888 382 aa13.38□□□□□ -0.27
CCDC60-201ENST00000327554 USH1GQ495M9 461 aa13.38□□□□□ -0.27
CCDC60-201ENST00000327554 ANKRD20A4Q4UJ75 823 aa13.38□□□□□ -0.27
CCDC60-201ENST00000327554 ANKRD22Q5VYY1 191 aa13.38□□□□□ -0.27
CCDC60-201ENST00000327554 B3GNT6Q6ZMB0 384 aa13.38□□□□□ -0.27
CCDC60-201ENST00000327554 MON1BQ7L1V2 547 aa13.38□□□□□ -0.27
CCDC60-201ENST00000327554 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.38□□□□□ -0.27
CCDC60-201ENST00000327554 TRIM11Q96F44 468 aa13.38□□□□□ -0.27
CCDC60-201ENST00000327554 NT5C1BQ96P26 610 aa13.38□□□□□ -0.27
CCDC60-201ENST00000327554 SLITRK1Q96PX8 696 aa13.38□□□□□ -0.27
CCDC60-201ENST00000327554 USTQ9Y2C2 406 aa13.38□□□□□ -0.27
CCDC60-201ENST00000327554 DAGLAQ9Y4D2 1042 aa13.38□□□□□ -0.27
CCDC60-201ENST00000327554 KRT5P13647 590 aa13.38□□□□□ -0.27
CCDC60-201ENST00000327554 GTF2H1P32780 548 aa13.38□□□□□ -0.27
CCDC60-201ENST00000327554 VCPP55072 806 aaKnown RBP13.38□□□□□ -0.27
CCDC60-201ENST00000327554 RPL26P61254 145 aaKnown RBP13.38□□□□□ -0.27
CCDC60-201ENST00000327554 SULT2A1Q06520 285 aa13.38□□□□□ -0.27
CCDC60-201ENST00000327554 CES4AQ5XG92 561 aa13.38□□□□□ -0.27
CCDC60-201ENST00000327554 KRT39Q6A163 491 aa13.38□□□□□ -0.27
CCDC60-201ENST00000327554 CIAPIN1Q6FI81 312 aa13.38□□□□□ -0.27
CCDC60-201ENST00000327554 KLC3Q6P597 504 aa13.38□□□□□ -0.27
CCDC60-201ENST00000327554 MFSD7Q6UXD7 560 aa13.38□□□□□ -0.27
CCDC60-201ENST00000327554 RBM44Q6ZP01 1051 aaKnown RBP13.38□□□□□ -0.27
CCDC60-201ENST00000327554 C15orf52Q6ZUT6 534 aaKnown RBP13.38□□□□□ -0.27
CCDC60-201ENST00000327554 TAS1R2Q8TE23 839 aa13.38□□□□□ -0.27
CCDC60-201ENST00000327554 CATSPER2Q96P56 530 aa13.38□□□□□ -0.27
CCDC60-201ENST00000327554 ACCSQ96QU6 501 aa13.38□□□□□ -0.27
CCDC60-201ENST00000327554 PCDH9Q9HC56 1237 aa13.38□□□□□ -0.27
CCDC60-201ENST00000327554 PPME1Q9Y570 386 aa13.38□□□□□ -0.27
CCDC60-201ENST00000327554 SNCAIPQ9Y6H5 919 aa13.38□□□□□ -0.27
CCDC60-201ENST00000327554 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.37□□□□□ -0.27
CCDC60-201ENST00000327554 MEI4A8MW99 385 aa13.37□□□□□ -0.27
CCDC60-201ENST00000327554 PRR5-ARHGAP8B1AHC4 643 aa13.37□□□□□ -0.27
CCDC60-201ENST00000327554 TFAP2AP05549 437 aa13.37□□□□□ -0.27
CCDC60-201ENST00000327554 SLURP2P0DP57 97 aa13.37□□□□□ -0.27
CCDC60-201ENST00000327554 CDK4P11802 303 aa13.37□□□□□ -0.27
CCDC60-201ENST00000327554 TCF4P15884 667 aa13.37□□□□□ -0.27
CCDC60-201ENST00000327554 ARHGAP8P85298 464 aa13.37□□□□□ -0.27
CCDC60-201ENST00000327554 NCOA4Q13772 614 aa13.37□□□□□ -0.27
CCDC60-201ENST00000327554 CCNIQ14094 377 aa13.37□□□□□ -0.27
CCDC60-201ENST00000327554 DBN1Q16643 649 aa13.37□□□□□ -0.27
CCDC60-201ENST00000327554 MMEL1Q495T6 779 aa13.37□□□□□ -0.27
CCDC60-201ENST00000327554 EFHC1Q5JVL4 640 aa13.37□□□□□ -0.27
CCDC60-201ENST00000327554 MFSD14BQ5SR56 506 aa13.37□□□□□ -0.27
CCDC60-201ENST00000327554 DUS1LQ6P1R4 473 aaKnown RBP13.37□□□□□ -0.27
CCDC60-201ENST00000327554 CBWD2Q8IUF1 395 aa13.37□□□□□ -0.27
CCDC60-201ENST00000327554 GDPD5Q8WTR4 605 aa13.37□□□□□ -0.27
CCDC60-201ENST00000327554 C7orf26Q96N11 449 aa13.37□□□□□ -0.27
CCDC60-201ENST00000327554 RBM38Q9H0Z9 239 aaKnown RBP13.37□□□□□ -0.27
CCDC60-201ENST00000327554 C15orf38-AP3S2A0A0A6YYH1 394 aa13.37□□□□□ -0.27
CCDC60-201ENST00000327554 E7ESA3 106 aa13.37□□□□□ -0.27
CCDC60-201ENST00000327554 ATF7P17544 494 aaPredicted RBP13.37□□□□□ -0.27
CCDC60-201ENST00000327554 MAGEA10P43363 369 aaPredicted RBP13.37□□□□□ -0.27
CCDC60-201ENST00000327554 EMP3P54852 163 aa13.37□□□□□ -0.27
CCDC60-201ENST00000327554 KLHDC10Q6PID8 442 aa13.37□□□□□ -0.27
CCDC60-201ENST00000327554 ARPINQ7Z6K5 226 aa13.37□□□□□ -0.27
CCDC60-201ENST00000327554 FBXO36Q8NEA4 188 aa13.37□□□□□ -0.27
CCDC60-201ENST00000327554 PIP4K2CQ8TBX8 421 aa13.37□□□□□ -0.27
CCDC60-201ENST00000327554 ZNF526Q8TF50 670 aaPredicted RBP13.37□□□□□ -0.27
CCDC60-201ENST00000327554 DCAF4Q8WV16 495 aa13.37□□□□□ -0.27
CCDC60-201ENST00000327554 RPGRQ92834 1020 aaKnown RBP13.37□□□□□ -0.27
CCDC60-201ENST00000327554 TMEM121Q9BTD3 319 aa13.37□□□□□ -0.27
CCDC60-201ENST00000327554 TMEM165Q9HC07 324 aa13.37□□□□□ -0.27
CCDC60-201ENST00000327554 TOPORSQ9NS56 1045 aaPredicted RBP13.37□□□□□ -0.27
CCDC60-201ENST00000327554 ARHGEF35A5YM69 484 aa13.36□□□□□ -0.27
CCDC60-201ENST00000327554 ITGAVP06756 1048 aa13.36□□□□□ -0.27
CCDC60-201ENST00000327554 NSFP46459 744 aaKnown RBP13.36□□□□□ -0.27
CCDC60-201ENST00000327554 RPL5P46777 297 aaKnown RBP13.36□□□□□ -0.27
CCDC60-201ENST00000327554 HIRAP54198 1017 aaPredicted RBP13.36□□□□□ -0.27
CCDC60-201ENST00000327554 BST1Q10588 318 aa13.36□□□□□ -0.27
CCDC60-201ENST00000327554 PTK7Q13308 1070 aa13.36□□□□□ -0.27
CCDC60-201ENST00000327554 MAMLD1Q13495 774 aa13.36□□□□□ -0.27
CCDC60-201ENST00000327554 HIC1Q14526 733 aa13.36□□□□□ -0.27
CCDC60-201ENST00000327554 MAP3K21Q5TCX8 1036 aa13.36□□□□□ -0.27
CCDC60-201ENST00000327554 SLFN13Q68D06 897 aa13.36□□□□□ -0.27
CCDC60-201ENST00000327554 CDHR3Q6ZTQ4 885 aa13.36□□□□□ -0.27
CCDC60-201ENST00000327554 FBXO11Q86XK2 927 aa13.36□□□□□ -0.27
CCDC60-201ENST00000327554 RHPN2Q8IUC4 686 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms