RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 MAPRE1Q15691 268 aaKnown RBP10.85□□□□□ -0.67
VIPAS39-201ENST00000327028 CCDC142Q17RM4 750 aa10.85□□□□□ -0.67
VIPAS39-201ENST00000327028 USP41Q3LFD5 358 aa10.85□□□□□ -0.67
VIPAS39-201ENST00000327028 ANKS3Q6ZW76 656 aa10.85□□□□□ -0.67
VIPAS39-201ENST00000327028 TTC30AQ86WT1 665 aa10.85□□□□□ -0.67
VIPAS39-201ENST00000327028 CEP57Q86XR8 500 aa10.85□□□□□ -0.67
VIPAS39-201ENST00000327028 DNAAF5Q86Y56 855 aa10.85□□□□□ -0.67
VIPAS39-201ENST00000327028 FUKQ8N0W3 1084 aa10.85□□□□□ -0.67
VIPAS39-201ENST00000327028 WDTC1Q8N5D0 677 aa10.85□□□□□ -0.67
VIPAS39-201ENST00000327028 ANKRD52Q8NB46 1076 aa10.85□□□□□ -0.67
VIPAS39-201ENST00000327028 UBE2Q2Q8WVN8 375 aa10.85□□□□□ -0.67
VIPAS39-201ENST00000327028 CTNNBL1Q8WYA6 563 aaPredicted RBP10.85□□□□□ -0.67
VIPAS39-201ENST00000327028 B3GNT5Q9BYG0 378 aa10.85□□□□□ -0.67
VIPAS39-201ENST00000327028 ZCWPW1Q9H0M4 648 aa10.85□□□□□ -0.67
VIPAS39-201ENST00000327028 LZTFL1Q9NQ48 299 aa10.85□□□□□ -0.67
VIPAS39-201ENST00000327028 STK39Q9UEW8 545 aa10.85□□□□□ -0.67
VIPAS39-201ENST00000327028 GBF1Q92538 1859 aa10.85□□□□□ -0.67
VIPAS39-201ENST00000327028 MYBPHLA2RUH7 354 aa10.85□□□□□ -0.67
VIPAS39-201ENST00000327028 MYBL1P10243 752 aa10.85□□□□□ -0.67
VIPAS39-201ENST00000327028 ADORA2BP29275 332 aa10.85□□□□□ -0.67
VIPAS39-201ENST00000327028 GPD2P43304 727 aa10.85□□□□□ -0.67
VIPAS39-201ENST00000327028 C1QBPQ07021 282 aaKnown RBP10.85□□□□□ -0.67
VIPAS39-201ENST00000327028 BST2Q10589 180 aaKnown RBP10.85□□□□□ -0.67
VIPAS39-201ENST00000327028 SHHQ15465 462 aa10.85□□□□□ -0.67
VIPAS39-201ENST00000327028 CTXN3Q4LDR2 81 aa10.85□□□□□ -0.67
VIPAS39-201ENST00000327028 RTP2Q5QGT7 225 aa10.85□□□□□ -0.67
VIPAS39-201ENST00000327028 TAS1R1Q7RTX1 841 aa10.85□□□□□ -0.67
VIPAS39-201ENST00000327028 DDX53Q86TM3 631 aaKnown RBP10.85□□□□□ -0.67
VIPAS39-201ENST00000327028 FAM35AQ86V20 835 aa10.85□□□□□ -0.67
VIPAS39-201ENST00000327028 MCOLN2Q8IZK6 566 aa10.85□□□□□ -0.67
VIPAS39-201ENST00000327028 PIK3R5Q8WYR1 880 aa10.85□□□□□ -0.67
VIPAS39-201ENST00000327028 SECISBP2LQ93073 1101 aaKnown RBP10.85□□□□□ -0.67
VIPAS39-201ENST00000327028 MYLPFQ96A32 169 aa10.85□□□□□ -0.67
VIPAS39-201ENST00000327028 PCED1BQ96HM7 432 aa10.85□□□□□ -0.67
VIPAS39-201ENST00000327028 VCPIP1Q96JH7 1222 aa10.85□□□□□ -0.67
VIPAS39-201ENST00000327028 B3GALT6Q96L58 329 aa10.85□□□□□ -0.67
VIPAS39-201ENST00000327028 CHST7Q9NS84 486 aa10.85□□□□□ -0.67
VIPAS39-201ENST00000327028 TRIM10Q9UDY6 481 aa10.85□□□□□ -0.67
VIPAS39-201ENST00000327028 GTF3C4Q9UKN8 822 aa10.85□□□□□ -0.67
VIPAS39-201ENST00000327028 A0A0A6YYK5 440 aaPredicted RBP10.84□□□□□ -0.67
VIPAS39-201ENST00000327028 LCHNA4D1U4 455 aa10.84□□□□□ -0.67
VIPAS39-201ENST00000327028 ABCB4P21439 1286 aa10.84□□□□□ -0.67
VIPAS39-201ENST00000327028 MMP8P22894 467 aa10.84□□□□□ -0.67
VIPAS39-201ENST00000327028 PTP4A2Q12974 167 aa10.84□□□□□ -0.67
VIPAS39-201ENST00000327028 PDCLQ13371 301 aa10.84□□□□□ -0.67
VIPAS39-201ENST00000327028 PAQR9Q6ZVX9 377 aa10.84□□□□□ -0.67
VIPAS39-201ENST00000327028 DCP1BQ8IZD4 617 aaKnown RBP10.84□□□□□ -0.67
VIPAS39-201ENST00000327028 MSANTD4Q8NCY6 345 aa10.84□□□□□ -0.67
VIPAS39-201ENST00000327028 UBA3Q8TBC4 463 aa10.84□□□□□ -0.67
VIPAS39-201ENST00000327028 ZNF653Q96CK0 615 aa10.84□□□□□ -0.67
VIPAS39-201ENST00000327028 NOX5Q96PH1 765 aa10.84□□□□□ -0.67
VIPAS39-201ENST00000327028 TMEM209Q96SK2 561 aa10.84□□□□□ -0.67
VIPAS39-201ENST00000327028 C11orf70Q9BRQ4 267 aa10.84□□□□□ -0.67
VIPAS39-201ENST00000327028 MED10Q9BTT4 135 aa10.84□□□□□ -0.67
VIPAS39-201ENST00000327028 THAP2Q9H0W7 228 aa10.84□□□□□ -0.67
VIPAS39-201ENST00000327028 MTRRQ9UBK8 725 aa10.84□□□□□ -0.67
VIPAS39-201ENST00000327028 CYTH4Q9UIA0 394 aa10.84□□□□□ -0.67
VIPAS39-201ENST00000327028 RWDD3Q9Y3V2 267 aa10.84□□□□□ -0.67
VIPAS39-201ENST00000327028 FAM170AA1A519 330 aa10.84□□□□□ -0.67
VIPAS39-201ENST00000327028 TBC1D4O60343 1298 aa10.84□□□□□ -0.67
VIPAS39-201ENST00000327028 CYP1A2P05177 515 aa10.84□□□□□ -0.67
VIPAS39-201ENST00000327028 CALB1P05937 261 aa10.84□□□□□ -0.67
VIPAS39-201ENST00000327028 GLUD2P49448 558 aa10.84□□□□□ -0.67
VIPAS39-201ENST00000327028 GPC5P78333 572 aa10.84□□□□□ -0.67
VIPAS39-201ENST00000327028 TCEAL1Q15170 157 aa10.84□□□□□ -0.67
VIPAS39-201ENST00000327028 PTPN20Q4JDL3 420 aa10.84□□□□□ -0.67
VIPAS39-201ENST00000327028 LIN9Q5TKA1 542 aa10.84□□□□□ -0.67
VIPAS39-201ENST00000327028 C4orf50Q6ZRC1 276 aa10.84□□□□□ -0.67
VIPAS39-201ENST00000327028 MMS22LQ6ZRQ5 1243 aa10.84□□□□□ -0.67
VIPAS39-201ENST00000327028 LRRTM3Q86VH5 581 aa10.84□□□□□ -0.67
VIPAS39-201ENST00000327028 ERICH1Q86X53 443 aa10.84□□□□□ -0.67
VIPAS39-201ENST00000327028 RFFLQ8WZ73 363 aa10.84□□□□□ -0.67
VIPAS39-201ENST00000327028 GDF15Q99988 308 aa10.84□□□□□ -0.67
VIPAS39-201ENST00000327028 DUSP16Q9BY84 665 aa10.84□□□□□ -0.67
VIPAS39-201ENST00000327028 UBE2OQ9C0C9 1292 aaKnown RBP10.84□□□□□ -0.67
VIPAS39-201ENST00000327028 AVENQ9NQS1 362 aaPredicted RBP10.84□□□□□ -0.67
VIPAS39-201ENST00000327028 KRT82Q9NSB4 513 aa10.84□□□□□ -0.67
VIPAS39-201ENST00000327028 TMLHEQ9NVH6 421 aa10.84□□□□□ -0.67
VIPAS39-201ENST00000327028 ADAM22Q9P0K1 906 aa10.84□□□□□ -0.67
VIPAS39-201ENST00000327028 BACE2Q9Y5Z0 518 aa10.84□□□□□ -0.67
VIPAS39-201ENST00000327028 PATJQ8NI35 1801 aa10.84□□□□□ -0.67
VIPAS39-201ENST00000327028 LINC01553A4QN01 128 aa10.83□□□□□ -0.68
VIPAS39-201ENST00000327028 CLDN5O00501 218 aa10.83□□□□□ -0.68
VIPAS39-201ENST00000327028 FGF18O76093 207 aa10.83□□□□□ -0.68
VIPAS39-201ENST00000327028 ABL1P00519 1130 aa10.83□□□□□ -0.68
VIPAS39-201ENST00000327028 FAM200BP0CF97 657 aa10.83□□□□□ -0.68
VIPAS39-201ENST00000327028 NPR3P17342 541 aa10.83□□□□□ -0.68
VIPAS39-201ENST00000327028 DSG1Q02413 1049 aa10.83□□□□□ -0.68
VIPAS39-201ENST00000327028 PDE4CQ08493 712 aa10.83□□□□□ -0.68
VIPAS39-201ENST00000327028 NYAP1Q6ZVC0 841 aa10.83□□□□□ -0.68
VIPAS39-201ENST00000327028 STK32AQ8WU08 396 aa10.83□□□□□ -0.68
VIPAS39-201ENST00000327028 SLC35F5Q8WV83 523 aa10.83□□□□□ -0.68
VIPAS39-201ENST00000327028 ARHGEF26Q96DR7 871 aa10.83□□□□□ -0.68
VIPAS39-201ENST00000327028 SMARCD1Q96GM5 515 aa10.83□□□□□ -0.68
VIPAS39-201ENST00000327028 GUCA1BQ9UMX6 200 aa10.83□□□□□ -0.68
VIPAS39-201ENST00000327028 DUSP10Q9Y6W6 482 aa10.83□□□□□ -0.68
VIPAS39-201ENST00000327028 PLXNA4Q9HCM2 1894 aa10.83□□□□□ -0.68
VIPAS39-201ENST00000327028 MYH10P35580 1976 aa10.83□□□□□ -0.68
VIPAS39-201ENST00000327028 XPO1O14980 1071 aaKnown RBP10.83□□□□□ -0.68
VIPAS39-201ENST00000327028 CTNNB1P35222 781 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms