RNA–Protein interactions for RNA: ENST00000324771.12

DDR1-223, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene DDR1, Length 4,148 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-223ENST00000324771 HOXD13P35453 343 aa12.38□□□□□ -0.43
DDR1-223ENST00000324771 ATN1P54259 1190 aaPredicted RBP12.38□□□□□ -0.43
DDR1-223ENST00000324771 CAV1Q03135 178 aa12.38□□□□□ -0.43
DDR1-223ENST00000324771 TSTA3Q13630 321 aaPredicted RBP12.38□□□□□ -0.43
DDR1-223ENST00000324771 THOC5Q13769 683 aaKnown RBP12.38□□□□□ -0.43
DDR1-223ENST00000324771 TADA2BQ86TJ2 420 aa12.38□□□□□ -0.43
DDR1-223ENST00000324771 CCDC68Q9H2F9 335 aa12.38□□□□□ -0.43
DDR1-223ENST00000324771 ERVK-5Q9HDB9 667 aa12.38□□□□□ -0.43
DDR1-223ENST00000324771 SYNPO2Q9UMS6 1093 aa12.38□□□□□ -0.43
DDR1-223ENST00000324771 A0A0A6YYK5 440 aaPredicted RBP12.38□□□□□ -0.43
DDR1-223ENST00000324771 SOWAHBA6NEL2 793 aa12.38□□□□□ -0.43
DDR1-223ENST00000324771 NFIL3Q16649 462 aa12.38□□□□□ -0.43
DDR1-223ENST00000324771 TLK2Q86UE8 772 aa12.38□□□□□ -0.43
DDR1-223ENST00000324771 ABCF3Q9NUQ8 709 aa12.38□□□□□ -0.43
DDR1-223ENST00000324771 UBP1Q9NZI7 540 aa12.38□□□□□ -0.43
DDR1-223ENST00000324771 USP18Q9UMW8 372 aa12.38□□□□□ -0.43
DDR1-223ENST00000324771 C17orf102A2RUQ5 167 aa12.38□□□□□ -0.43
DDR1-223ENST00000324771 E5RJQ4 531 aa12.38□□□□□ -0.43
DDR1-223ENST00000324771 CYB561D2O14569 222 aa12.38□□□□□ -0.43
DDR1-223ENST00000324771 AP1G2O75843 785 aa12.38□□□□□ -0.43
DDR1-223ENST00000324771 MAP3K7CLP57077 242 aa12.38□□□□□ -0.43
DDR1-223ENST00000324771 TAP1Q03518 808 aa12.38□□□□□ -0.43
DDR1-223ENST00000324771 MROH9Q5TGP6 573 aa12.38□□□□□ -0.43
DDR1-223ENST00000324771 CCNYL1Q8N7R7 359 aa12.38□□□□□ -0.43
DDR1-223ENST00000324771 PRELID2Q8N945 189 aa12.38□□□□□ -0.43
DDR1-223ENST00000324771 MICAL1Q8TDZ2 1067 aa12.38□□□□□ -0.43
DDR1-223ENST00000324771 PABPC5Q96DU9 382 aaKnown RBP12.38□□□□□ -0.43
DDR1-223ENST00000324771 EPN3Q9H201 632 aa12.38□□□□□ -0.43
DDR1-223ENST00000324771 ABHD16BQ9H3Z7 469 aa12.38□□□□□ -0.43
DDR1-223ENST00000324771 CPSF2Q9P2I0 782 aaKnown RBP12.38□□□□□ -0.43
DDR1-223ENST00000324771 CFAP69A5D8W1 941 aa12.37□□□□□ -0.43
DDR1-223ENST00000324771 CFLARO15519 480 aa12.37□□□□□ -0.43
DDR1-223ENST00000324771 ZC3H11AO75152 810 aaKnown RBP eCLIP12.37□□□□□ -0.43
DDR1-223ENST00000324771 RECQL4O94761 1208 aa12.37□□□□□ -0.43
DDR1-223ENST00000324771 EPHB2P29323 1055 aa12.37□□□□□ -0.43
DDR1-223ENST00000324771 GARSP41250 739 aaKnown RBP12.37□□□□□ -0.43
DDR1-223ENST00000324771 OVGP1Q12889 678 aa12.37□□□□□ -0.43
DDR1-223ENST00000324771 SLC12A1Q13621 1099 aa12.37□□□□□ -0.43
DDR1-223ENST00000324771 RPS6KA2Q15349 733 aa12.37□□□□□ -0.43
DDR1-223ENST00000324771 PCSK7Q16549 785 aa12.37□□□□□ -0.43
DDR1-223ENST00000324771 C11orf63Q6NUN7 778 aa12.37□□□□□ -0.43
DDR1-223ENST00000324771 ZPBP2Q6X784 338 aa12.37□□□□□ -0.43
DDR1-223ENST00000324771 SPOCD1Q6ZMY3 1216 aa12.37□□□□□ -0.43
DDR1-223ENST00000324771 KIF2BQ8N4N8 673 aa12.37□□□□□ -0.43
DDR1-223ENST00000324771 SAMD3Q8N6K7 520 aa12.37□□□□□ -0.43
DDR1-223ENST00000324771 FSD1LQ9BXM9 530 aa12.37□□□□□ -0.43
DDR1-223ENST00000324771 BFARQ9NZS9 450 aa12.37□□□□□ -0.43
DDR1-223ENST00000324771 CTNNAL1Q9UBT7 734 aa12.37□□□□□ -0.43
DDR1-223ENST00000324771 UBQLN1Q9UMX0 589 aaKnown RBP12.37□□□□□ -0.43
DDR1-223ENST00000324771 COG5Q9UP83 839 aa12.37□□□□□ -0.43
DDR1-223ENST00000324771 RRN3P2A6NIE6 340 aa12.37□□□□□ -0.43
DDR1-223ENST00000324771 TYK2P29597 1187 aa12.37□□□□□ -0.43
DDR1-223ENST00000324771 PEX19P40855 299 aa12.37□□□□□ -0.43
DDR1-223ENST00000324771 TFDP3Q5H9I0 405 aa12.37□□□□□ -0.43
DDR1-223ENST00000324771 MIB1Q86YT6 1006 aa12.37□□□□□ -0.43
DDR1-223ENST00000324771 SLC9A9Q8IVB4 645 aa12.37□□□□□ -0.43
DDR1-223ENST00000324771 AENQ8WTP8 325 aaKnown RBP12.37□□□□□ -0.43
DDR1-223ENST00000324771 GAD1Q99259 594 aa12.37□□□□□ -0.43
DDR1-223ENST00000324771 GOLGA2P5Q9HBQ8 144 aa12.37□□□□□ -0.43
DDR1-223ENST00000324771 SLC24A3Q9HC58 644 aa12.37□□□□□ -0.43
DDR1-223ENST00000324771 PFDN4Q9NQP4 134 aa12.37□□□□□ -0.43
DDR1-223ENST00000324771 PCDHA2Q9Y5H9 948 aa12.37□□□□□ -0.43
DDR1-223ENST00000324771 DHX15O43143 795 aaKnown RBP12.37□□□□□ -0.43
DDR1-223ENST00000324771 GAS2O43903 313 aaKnown RBP12.37□□□□□ -0.43
DDR1-223ENST00000324771 TADA2AO75478 443 aa12.37□□□□□ -0.43
DDR1-223ENST00000324771 SHBGP04278 402 aa12.37□□□□□ -0.43
DDR1-223ENST00000324771 ATXN8OSP0DMR3 200 aa12.37□□□□□ -0.43
DDR1-223ENST00000324771 CCDC130P13994 396 aa12.37□□□□□ -0.43
DDR1-223ENST00000324771 TAS2R40P59535 323 aa12.37□□□□□ -0.43
DDR1-223ENST00000324771 SLC12A6Q9UHW9 1150 aa12.37□□□□□ -0.43
DDR1-223ENST00000324771 SNCAIPQ9Y6H5 919 aa12.37□□□□□ -0.43
DDR1-223ENST00000324771 CNTNAP1P78357 1384 aa12.36□□□□□ -0.43
DDR1-223ENST00000324771 KRT38O76015 456 aa12.36□□□□□ -0.43
DDR1-223ENST00000324771 VDRP11473 427 aa12.36□□□□□ -0.43
DDR1-223ENST00000324771 SSTR1P30872 391 aa12.36□□□□□ -0.43
DDR1-223ENST00000324771 ELF1P32519 619 aa12.36□□□□□ -0.43
DDR1-223ENST00000324771 CLNS1AP54105 237 aaKnown RBP12.36□□□□□ -0.43
DDR1-223ENST00000324771 LRRC34Q8IZ02 419 aa12.36□□□□□ -0.43
DDR1-223ENST00000324771 PDCD7Q8N8D1 485 aaKnown RBP12.36□□□□□ -0.43
DDR1-223ENST00000324771 TINF2Q9BSI4 451 aa12.36□□□□□ -0.43
DDR1-223ENST00000324771 PLEKHA5Q9HAU0 1116 aa12.36□□□□□ -0.43
DDR1-223ENST00000324771 H3BRJ5 948 aa12.36□□□□□ -0.43
DDR1-223ENST00000324771 MAP2K7O14733 419 aa12.36□□□□□ -0.43
DDR1-223ENST00000324771 GPC4O75487 556 aa12.36□□□□□ -0.43
DDR1-223ENST00000324771 HSPA9P38646 679 aaKnown RBP12.36□□□□□ -0.43
DDR1-223ENST00000324771 RASSF2P50749 326 aa12.36□□□□□ -0.43
DDR1-223ENST00000324771 NCKAP1LP55160 1127 aa12.36□□□□□ -0.43
DDR1-223ENST00000324771 STAT4Q14765 748 aa12.36□□□□□ -0.43
DDR1-223ENST00000324771 FBXO47Q5MNV8 452 aa12.36□□□□□ -0.43
DDR1-223ENST00000324771 SRLQ86TD4 932 aa12.36□□□□□ -0.43
DDR1-223ENST00000324771 RAPGEF5Q92565 580 aa12.36□□□□□ -0.43
DDR1-223ENST00000324771 SEPT5Q99719 369 aaPredicted RBP12.36□□□□□ -0.43
DDR1-223ENST00000324771 RSAD1Q9HA92 442 aa12.36□□□□□ -0.43
DDR1-223ENST00000324771 ETNK1Q9HBU6 452 aa12.36□□□□□ -0.43
DDR1-223ENST00000324771 PCDHA3Q9Y5H8 950 aa12.36□□□□□ -0.43
DDR1-223ENST00000324771 ADGRA3Q8IWK6 1321 aa12.36□□□□□ -0.43
DDR1-223ENST00000324771 KIAA0100Q14667 2235 aaKnown RBP12.36□□□□□ -0.43
DDR1-223ENST00000324771 ZBBXA8MT70 800 aa12.36□□□□□ -0.43
DDR1-223ENST00000324771 MICAL2O94851 1124 aa12.36□□□□□ -0.43
DDR1-223ENST00000324771 CD4P01730 458 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 371 ms