RNA–Protein interactions for RNA: ENST00000324238.6

CRLF3-201, Transcript of cytokine receptor like factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRLF3, Length 2,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-201ENST00000324238 GRAMD1AQ96CP6 724 aa20.86■□□□□ 0.93
CRLF3-201ENST00000324238 LRMDAQ9H2I8 198 aa20.86■□□□□ 0.93
CRLF3-201ENST00000324238 RPL22P35268 128 aaKnown RBP20.85■□□□□ 0.93
CRLF3-201ENST00000324238 SMAD1Q15797 465 aaKnown RBP20.85■□□□□ 0.93
CRLF3-201ENST00000324238 MDH1BQ5I0G3 518 aa20.85■□□□□ 0.93
CRLF3-201ENST00000324238 FKBP1CQ5VVH2 108 aa20.85■□□□□ 0.93
CRLF3-201ENST00000324238 APBB1IPQ7Z5R6 666 aaPredicted RBP20.85■□□□□ 0.93
CRLF3-201ENST00000324238 TRIM50Q86XT4 487 aa20.85■□□□□ 0.93
CRLF3-201ENST00000324238 PALM2Q8IXS6 379 aa20.85■□□□□ 0.93
CRLF3-201ENST00000324238 CCDC33Q8N5R6 958 aa20.85■□□□□ 0.93
CRLF3-201ENST00000324238 CNKSR2Q8WXI2 1034 aa20.85■□□□□ 0.93
CRLF3-201ENST00000324238 RAB3IPQ96QF0 476 aaPredicted RBP20.85■□□□□ 0.93
CRLF3-201ENST00000324238 MIPEPQ99797 713 aa20.85■□□□□ 0.93
CRLF3-201ENST00000324238 POLIQ9UNA4 740 aa20.85■□□□□ 0.93
CRLF3-201ENST00000324238 CNTNAP2Q9UHC6 1331 aa20.85■□□□□ 0.93
CRLF3-201ENST00000324238 ABHD2P08910 425 aa20.85■□□□□ 0.93
CRLF3-201ENST00000324238 CCNHP51946 323 aaPredicted RBP20.85■□□□□ 0.93
CRLF3-201ENST00000324238 FAXCQ5TGI0 409 aa20.85■□□□□ 0.93
CRLF3-201ENST00000324238 ANGEL2Q5VTE6 544 aaKnown RBP20.85■□□□□ 0.93
CRLF3-201ENST00000324238 DSTYKQ6XUX3 929 aa20.85■□□□□ 0.93
CRLF3-201ENST00000324238 PAXIP1Q6ZW49 1069 aaPredicted RBP20.85■□□□□ 0.93
CRLF3-201ENST00000324238 ZNF395Q9H8N7 513 aaPredicted RBP20.85■□□□□ 0.93
CRLF3-201ENST00000324238 ARL8BQ9NVJ2 186 aa20.85■□□□□ 0.93
CRLF3-201ENST00000324238 ARMCX1Q9P291 453 aa20.85■□□□□ 0.93
CRLF3-201ENST00000324238 HEY2Q9UBP5 337 aa20.85■□□□□ 0.93
CRLF3-201ENST00000324238 ZNF214Q9UL59 606 aaPredicted RBP20.85■□□□□ 0.93
CRLF3-201ENST00000324238 PRPF4O43172 522 aaKnown RBP eCLIP20.85■□□□□ 0.93
CRLF3-201ENST00000324238 GEMIN4P57678 1058 aaKnown RBP20.85■□□□□ 0.93
CRLF3-201ENST00000324238 MMRN1Q13201 1228 aa20.85■□□□□ 0.93
CRLF3-201ENST00000324238 MORF4L2Q15014 288 aa20.85■□□□□ 0.93
CRLF3-201ENST00000324238 NAIF1Q69YI7 327 aaPredicted RBP20.85■□□□□ 0.93
CRLF3-201ENST00000324238 ABHD15Q6UXT9 468 aa20.85■□□□□ 0.93
CRLF3-201ENST00000324238 THNSL1Q8IYQ7 743 aa20.85■□□□□ 0.93
CRLF3-201ENST00000324238 ZNF280CQ8ND82 737 aa20.85■□□□□ 0.93
CRLF3-201ENST00000324238 DTX3LQ8TDB6 740 aa20.85■□□□□ 0.93
CRLF3-201ENST00000324238 TRIM56Q9BRZ2 755 aaKnown RBP20.85■□□□□ 0.93
CRLF3-201ENST00000324238 CALN1Q9BXU9 219 aa20.85■□□□□ 0.93
CRLF3-201ENST00000324238 CYP39A1Q9NYL5 469 aa20.85■□□□□ 0.93
CRLF3-201ENST00000324238 CYTH4Q9UIA0 394 aa20.85■□□□□ 0.93
CRLF3-201ENST00000324238 PCK1P35558 622 aa20.84■□□□□ 0.93
CRLF3-201ENST00000324238 KHDC1Q4VXA5 237 aaKnown RBP20.84■□□□□ 0.93
CRLF3-201ENST00000324238 SH3PXD2AQ5TCZ1 1133 aa20.84■□□□□ 0.93
CRLF3-201ENST00000324238 RELL1Q8IUW5 271 aa20.84■□□□□ 0.93
CRLF3-201ENST00000324238 LRRC71Q8N4P6 559 aa20.84■□□□□ 0.93
CRLF3-201ENST00000324238 MAB21L3Q8N8X9 362 aa20.84■□□□□ 0.93
CRLF3-201ENST00000324238 CEP120Q8N960 986 aa20.84■□□□□ 0.93
CRLF3-201ENST00000324238 RSAD2Q8WXG1 361 aa20.84■□□□□ 0.93
CRLF3-201ENST00000324238 NAF1Q96HR8 494 aaKnown RBP20.84■□□□□ 0.93
CRLF3-201ENST00000324238 FAM111AQ96PZ2 611 aa20.84■□□□□ 0.93
CRLF3-201ENST00000324238 YIPF3Q9GZM5 350 aa20.84■□□□□ 0.93
CRLF3-201ENST00000324238 RNPEPL1Q9HAU8 725 aa20.84■□□□□ 0.93
CRLF3-201ENST00000324238 ENO4A6NNW6 628 aa20.84■□□□□ 0.93
CRLF3-201ENST00000324238 KRT19P08727 400 aa20.84■□□□□ 0.93
CRLF3-201ENST00000324238 LMNB2Q03252 620 aa20.84■□□□□ 0.93
CRLF3-201ENST00000324238 ATP2A1O14983 1001 aa20.83■□□□□ 0.93
CRLF3-201ENST00000324238 TPBGLP0DKB5 382 aa20.83■□□□□ 0.93
CRLF3-201ENST00000324238 PTPRAP18433 802 aa20.83■□□□□ 0.93
CRLF3-201ENST00000324238 GCKP35557 465 aa20.83■□□□□ 0.93
CRLF3-201ENST00000324238 CLDN10P78369 228 aa20.83■□□□□ 0.93
CRLF3-201ENST00000324238 IMPG2Q9BZV3 1241 aa20.83■□□□□ 0.93
CRLF3-201ENST00000324238 MAGEB2O15479 319 aa20.83■□□□□ 0.92
CRLF3-201ENST00000324238 CALB2P22676 271 aa20.83■□□□□ 0.92
CRLF3-201ENST00000324238 SERPINB3P29508 390 aa20.83■□□□□ 0.92
CRLF3-201ENST00000324238 TRIM72Q6ZMU5 477 aa20.83■□□□□ 0.92
CRLF3-201ENST00000324238 CLNKQ7Z7G1 428 aa20.83■□□□□ 0.92
CRLF3-201ENST00000324238 SERAC1Q96JX3 654 aa20.83■□□□□ 0.92
CRLF3-201ENST00000324238 CGRRF1Q99675 332 aa20.83■□□□□ 0.92
CRLF3-201ENST00000324238 C17orf75Q9HAS0 396 aa20.83■□□□□ 0.92
CRLF3-201ENST00000324238 ZNF302Q9NR11 478 aa20.83■□□□□ 0.92
CRLF3-201ENST00000324238 XPO7Q9UIA9 1087 aaKnown RBP20.83■□□□□ 0.92
CRLF3-201ENST00000324238 SMG5Q9UPR3 1016 aaKnown RBP20.83■□□□□ 0.92
CRLF3-201ENST00000324238 A0A0B4J269 797 aa20.82■□□□□ 0.92
CRLF3-201ENST00000324238 BGNP21810 368 aa20.82■□□□□ 0.92
CRLF3-201ENST00000324238 TUBP50607 506 aa20.82■□□□□ 0.92
CRLF3-201ENST00000324238 SLC8A3P57103 927 aa20.82■□□□□ 0.92
CRLF3-201ENST00000324238 ZBTB16Q05516 673 aa20.82■□□□□ 0.92
CRLF3-201ENST00000324238 TNFAIP1Q13829 316 aa20.82■□□□□ 0.92
CRLF3-201ENST00000324238 PTPN20Q4JDL3 420 aa20.82■□□□□ 0.92
CRLF3-201ENST00000324238 ZBED3Q96IU2 234 aaPredicted RBP20.82■□□□□ 0.92
CRLF3-201ENST00000324238 TTC25Q96NG3 672 aa20.82■□□□□ 0.92
CRLF3-201ENST00000324238 GRAP2O75791 330 aa20.82■□□□□ 0.92
CRLF3-201ENST00000324238 DCTN3O75935 186 aa20.82■□□□□ 0.92
CRLF3-201ENST00000324238 PTDSS1P48651 473 aaKnown RBP20.82■□□□□ 0.92
CRLF3-201ENST00000324238 TMEM132AQ24JP5 1023 aa20.82■□□□□ 0.92
CRLF3-201ENST00000324238 NBPF20Q3BBV1 942 aa20.82■□□□□ 0.92
CRLF3-201ENST00000324238 RFX6Q8HWS3 928 aa20.82■□□□□ 0.92
CRLF3-201ENST00000324238 RIBC1Q8N443 379 aaPredicted RBP20.82■□□□□ 0.92
CRLF3-201ENST00000324238 SLC7A3Q8WY07 619 aa20.82■□□□□ 0.92
CRLF3-201ENST00000324238 MECRQ9BV79 373 aa20.82■□□□□ 0.92
CRLF3-201ENST00000324238 COL2A1P02458 1487 aaPredicted RBP20.82■□□□□ 0.92
CRLF3-201ENST00000324238 CCDC15Q0P6D6 951 aa20.82■□□□□ 0.92
CRLF3-201ENST00000324238 XKR3Q5GH77 459 aa20.82■□□□□ 0.92
CRLF3-201ENST00000324238 CAPRIN2Q6IMN6 1127 aaKnown RBP20.82■□□□□ 0.92
CRLF3-201ENST00000324238 STK32AQ8WU08 396 aa20.82■□□□□ 0.92
CRLF3-201ENST00000324238 TRAPPC12Q8WVT3 735 aa20.82■□□□□ 0.92
CRLF3-201ENST00000324238 CCDC195A0A1B0GUA6 201 aa20.81■□□□□ 0.92
CRLF3-201ENST00000324238 LRCH4O75427 683 aa20.81■□□□□ 0.92
CRLF3-201ENST00000324238 GNAZP19086 355 aa20.81■□□□□ 0.92
CRLF3-201ENST00000324238 ELK3P41970 407 aa20.81■□□□□ 0.92
CRLF3-201ENST00000324238 TGFB2P61812 414 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms