RNA–Protein interactions for RNA: ENST00000324106.8

CD28-201, Transcript of CD28 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD28, Length 4,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-201ENST00000324106 ATXN3LQ9H3M9 355 aa9.34□□□□□ -0.91
CD28-201ENST00000324106 THEGQ9P2T0 379 aa9.34□□□□□ -0.91
CD28-201ENST00000324106 LGALS2P05162 132 aa9.34□□□□□ -0.91
CD28-201ENST00000324106 ITGALP20701 1170 aa9.34□□□□□ -0.91
CD28-201ENST00000324106 GRK4P32298 578 aa9.34□□□□□ -0.91
CD28-201ENST00000324106 FDFT1P37268 417 aa9.34□□□□□ -0.91
CD28-201ENST00000324106 ADCYAP1R1P41586 468 aa9.34□□□□□ -0.91
CD28-201ENST00000324106 AARSP49588 968 aaKnown RBP eCLIP9.34□□□□□ -0.91
CD28-201ENST00000324106 SLC45A4Q5BKX6 768 aa9.34□□□□□ -0.91
CD28-201ENST00000324106 PATL1Q86TB9 770 aaKnown RBP9.34□□□□□ -0.91
CD28-201ENST00000324106 CCNJLQ8IV13 435 aa9.34□□□□□ -0.91
CD28-201ENST00000324106 SLAIN1Q8ND83 568 aa9.34□□□□□ -0.91
CD28-201ENST00000324106 IPMKQ8NFU5 416 aa9.34□□□□□ -0.91
CD28-201ENST00000324106 SLC20A1Q8WUM9 679 aa9.34□□□□□ -0.91
CD28-201ENST00000324106 ANKS1AQ92625 1134 aa9.34□□□□□ -0.91
CD28-201ENST00000324106 MKL1Q969V6 931 aa9.34□□□□□ -0.91
CD28-201ENST00000324106 GAS2L1Q99501 681 aaPredicted RBP9.34□□□□□ -0.91
CD28-201ENST00000324106 PRPF18Q99633 342 aaKnown RBP9.34□□□□□ -0.91
CD28-201ENST00000324106 NAT9Q9BTE0 207 aa9.34□□□□□ -0.91
CD28-201ENST00000324106 DDX47Q9H0S4 455 aaKnown RBP9.34□□□□□ -0.91
CD28-201ENST00000324106 WDR41Q9HAD4 459 aa9.34□□□□□ -0.91
CD28-201ENST00000324106 ZC3H7BQ9UGR2 993 aaKnown RBP9.34□□□□□ -0.91
CD28-201ENST00000324106 TEKT2Q9UIF3 430 aa9.34□□□□□ -0.91
CD28-201ENST00000324106 AK9Q5TCS8 1911 aa9.34□□□□□ -0.91
CD28-201ENST00000324106 LOC102724159A0A0B4J2E5 919 aa9.34□□□□□ -0.91
CD28-201ENST00000324106 PRR23AA6NEV1 266 aa9.34□□□□□ -0.91
CD28-201ENST00000324106 CASTOR2A6NHX0 329 aa9.34□□□□□ -0.91
CD28-201ENST00000324106 SPDYE5A6NIY4 337 aa9.34□□□□□ -0.91
CD28-201ENST00000324106 TEX33O43247 280 aa9.34□□□□□ -0.91
CD28-201ENST00000324106 ADH1AP07327 375 aa9.34□□□□□ -0.91
CD28-201ENST00000324106 BRD2P25440 801 aaKnown RBP9.34□□□□□ -0.91
CD28-201ENST00000324106 VCPP55072 806 aaKnown RBP9.34□□□□□ -0.91
CD28-201ENST00000324106 RHOAP61586 193 aa9.34□□□□□ -0.91
CD28-201ENST00000324106 EFTUD2Q15029 972 aaKnown RBP eCLIP9.34□□□□□ -0.91
CD28-201ENST00000324106 PWP2Q15269 919 aaKnown RBP9.34□□□□□ -0.91
CD28-201ENST00000324106 PDCD2Q16342 344 aaPredicted RBP9.34□□□□□ -0.91
CD28-201ENST00000324106 SPDYE7PQ495Y7 208 aa9.34□□□□□ -0.91
CD28-201ENST00000324106 ZRANB3Q5FWF4 1079 aa9.34□□□□□ -0.91
CD28-201ENST00000324106 KDELC2Q7Z4H8 507 aa9.34□□□□□ -0.91
CD28-201ENST00000324106 ENGASEQ8NFI3 743 aa9.34□□□□□ -0.91
CD28-201ENST00000324106 C1orf54Q8WWF1 131 aa9.34□□□□□ -0.91
CD28-201ENST00000324106 DACT3Q96B18 629 aaPredicted RBP9.34□□□□□ -0.91
CD28-201ENST00000324106 CAPNS2Q96L46 248 aa9.34□□□□□ -0.91
CD28-201ENST00000324106 RUSC1Q9BVN2 902 aa9.34□□□□□ -0.91
CD28-201ENST00000324106 MAF1Q9H063 256 aa9.34□□□□□ -0.91
CD28-201ENST00000324106 GPRC5CQ9NQ84 441 aa9.34□□□□□ -0.91
CD28-201ENST00000324106 CHCHD3Q9NX63 227 aaKnown RBP9.34□□□□□ -0.91
CD28-201ENST00000324106 STX18Q9P2W9 335 aaKnown RBP9.34□□□□□ -0.91
CD28-201ENST00000324106 FHOD1Q9Y613 1164 aa9.34□□□□□ -0.91
CD28-201ENST00000324106 A0A1B0GTH6 734 aa9.34□□□□□ -0.91
CD28-201ENST00000324106 NCAM2O15394 837 aa9.34□□□□□ -0.91
CD28-201ENST00000324106 POMCP01189 267 aa9.34□□□□□ -0.91
CD28-201ENST00000324106 ATP5BP06576 529 aaKnown RBP9.34□□□□□ -0.91
CD28-201ENST00000324106 ITIH2P19823 946 aa9.34□□□□□ -0.91
CD28-201ENST00000324106 ZNF135P52742 658 aaPredicted RBP9.34□□□□□ -0.91
CD28-201ENST00000324106 BYSLQ13895 437 aaKnown RBP9.34□□□□□ -0.91
CD28-201ENST00000324106 PCSK7Q16549 785 aa9.34□□□□□ -0.91
CD28-201ENST00000324106 KLHDC7AQ5VTJ3 777 aa9.34□□□□□ -0.91
CD28-201ENST00000324106 CXCL17Q6UXB2 119 aa9.34□□□□□ -0.91
CD28-201ENST00000324106 DDIASQ8IXT1 998 aa9.34□□□□□ -0.91
CD28-201ENST00000324106 ACSF2Q96CM8 615 aaPredicted RBP9.34□□□□□ -0.91
CD28-201ENST00000324106 ADGRE3Q9BY15 652 aa9.34□□□□□ -0.91
CD28-201ENST00000324106 GOLPH3Q9H4A6 298 aa9.34□□□□□ -0.91
CD28-201ENST00000324106 TAF1DQ9H5J8 278 aaPredicted RBP9.34□□□□□ -0.91
CD28-201ENST00000324106 SLC28A3Q9HAS3 691 aa9.34□□□□□ -0.91
CD28-201ENST00000324106 DMAP1Q9NPF5 467 aaPredicted RBP9.34□□□□□ -0.91
CD28-201ENST00000324106 DDX43Q9NXZ2 648 aaKnown RBP9.34□□□□□ -0.91
CD28-201ENST00000324106 STK39Q9UEW8 545 aa9.34□□□□□ -0.91
CD28-201ENST00000324106 LNPEPQ9UIQ6 1025 aa9.34□□□□□ -0.91
CD28-201ENST00000324106 TPX2Q9ULW0 747 aaKnown RBP9.34□□□□□ -0.91
CD28-201ENST00000324106 A0A1W2PQJ5 194 aa9.33□□□□□ -0.92
CD28-201ENST00000324106 SPECC1L-ADORA2AF8WAN1 911 aa9.33□□□□□ -0.92
CD28-201ENST00000324106 FOXN1O15353 648 aa9.33□□□□□ -0.92
CD28-201ENST00000324106 CST8O60676 142 aa9.33□□□□□ -0.92
CD28-201ENST00000324106 MED24O75448 989 aa9.33□□□□□ -0.92
CD28-201ENST00000324106 OCM2P0CE71 109 aa9.33□□□□□ -0.92
CD28-201ENST00000324106 OCMP0CE72 109 aaPredicted RBP9.33□□□□□ -0.92
CD28-201ENST00000324106 YWHAQP27348 245 aa9.33□□□□□ -0.92
CD28-201ENST00000324106 CCR1P32246 355 aa9.33□□□□□ -0.92
CD28-201ENST00000324106 SLC7A5Q01650 507 aa9.33□□□□□ -0.92
CD28-201ENST00000324106 SGCGQ13326 291 aa9.33□□□□□ -0.92
CD28-201ENST00000324106 USP10Q14694 798 aaKnown RBP9.33□□□□□ -0.92
CD28-201ENST00000324106 E4F1Q66K89 784 aaPredicted RBP9.33□□□□□ -0.92
CD28-201ENST00000324106 ERAP2Q6P179 960 aa9.33□□□□□ -0.92
CD28-201ENST00000324106 GPR142Q7Z601 462 aa9.33□□□□□ -0.92
CD28-201ENST00000324106 PRUNE1Q86TP1 453 aa9.33□□□□□ -0.92
CD28-201ENST00000324106 CARNMT1Q8N4J0 409 aa9.33□□□□□ -0.92
CD28-201ENST00000324106 SLC35G2Q8TBE7 412 aa9.33□□□□□ -0.92
CD28-201ENST00000324106 NRBF2Q96F24 287 aa9.33□□□□□ -0.92
CD28-201ENST00000324106 SPATA17Q96L03 361 aa9.33□□□□□ -0.92
CD28-201ENST00000324106 GBP5Q96PP8 586 aa9.33□□□□□ -0.92
CD28-201ENST00000324106 METTL5Q9NRN9 209 aaKnown RBP9.33□□□□□ -0.92
CD28-201ENST00000324106 C5orf58C9J3I9 102 aa9.33□□□□□ -0.92
CD28-201ENST00000324106 F5H423 210 aaPredicted RBP9.33□□□□□ -0.92
CD28-201ENST00000324106 KRT16P08779 473 aa9.33□□□□□ -0.92
CD28-201ENST00000324106 CHRM3P20309 590 aa9.33□□□□□ -0.92
CD28-201ENST00000324106 EIF4BP23588 611 aaKnown RBP9.33□□□□□ -0.92
CD28-201ENST00000324106 SSTR3P32745 418 aaPredicted RBP9.33□□□□□ -0.92
CD28-201ENST00000324106 CTNNB1P35222 781 aa9.33□□□□□ -0.92
CD28-201ENST00000324106 GRK3P35626 688 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms