RNA–Protein interactions for RNA: ENST00000323701.10

USP39-201, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,177 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-201ENST00000323701 I3L4J1 428 aa19.46■□□□□ 0.71
USP39-201ENST00000323701 B4GALT3O60512 393 aa19.46■□□□□ 0.71
USP39-201ENST00000323701 HUS1O60921 280 aa19.46■□□□□ 0.71
USP39-201ENST00000323701 GABRB2P47870 512 aa19.46■□□□□ 0.71
USP39-201ENST00000323701 RWDD2BP57060 319 aa19.46■□□□□ 0.71
USP39-201ENST00000323701 BEND6Q5SZJ8 279 aaPredicted RBP19.46■□□□□ 0.71
USP39-201ENST00000323701 TXNRD3NBQ6F5E7 133 aa19.46■□□□□ 0.71
USP39-201ENST00000323701 DCUN1D2Q6PH85 259 aa19.46■□□□□ 0.71
USP39-201ENST00000323701 FAM126BQ8IXS8 530 aa19.46■□□□□ 0.71
USP39-201ENST00000323701 HACE1Q8IYU2 909 aa19.46■□□□□ 0.71
USP39-201ENST00000323701 CRYBG2Q8N1P7 616 aa19.46■□□□□ 0.71
USP39-201ENST00000323701 ARFGAP1Q8N6T3 406 aa19.46■□□□□ 0.71
USP39-201ENST00000323701 SLC38A7Q9NVC3 462 aa19.46■□□□□ 0.71
USP39-201ENST00000323701 ARGLU1Q9NWB6 273 aaPredicted RBP19.46■□□□□ 0.71
USP39-201ENST00000323701 DNM1LO00429 736 aa19.45■□□□□ 0.7
USP39-201ENST00000323701 SART1O43290 800 aaKnown RBP19.45■□□□□ 0.7
USP39-201ENST00000323701 CAND2O75155 1236 aa19.45■□□□□ 0.7
USP39-201ENST00000323701 SASH3O75995 380 aa19.45■□□□□ 0.7
USP39-201ENST00000323701 TKTP29401 623 aaKnown RBP19.45■□□□□ 0.7
USP39-201ENST00000323701 SLC1A1P43005 524 aa19.45■□□□□ 0.7
USP39-201ENST00000323701 RAB27AP51159 221 aa19.45■□□□□ 0.7
USP39-201ENST00000323701 BRD3Q15059 726 aa19.45■□□□□ 0.7
USP39-201ENST00000323701 UPP1Q16831 310 aa19.45■□□□□ 0.7
USP39-201ENST00000323701 TET1Q8NFU7 2136 aa19.45■□□□□ 0.7
USP39-201ENST00000323701 SENP8Q96LD8 212 aa19.45■□□□□ 0.7
USP39-201ENST00000323701 SNX25Q9H3E2 840 aa19.45■□□□□ 0.7
USP39-201ENST00000323701 SYNCQ9H7C4 482 aa19.45■□□□□ 0.7
USP39-201ENST00000323701 METTL5Q9NRN9 209 aaKnown RBP19.45■□□□□ 0.7
USP39-201ENST00000323701 SQORQ9Y6N5 450 aa19.45■□□□□ 0.7
USP39-201ENST00000323701 SIGLEC16A6NMB1 481 aa19.44■□□□□ 0.7
USP39-201ENST00000323701 NBNO60934 754 aa19.44■□□□□ 0.7
USP39-201ENST00000323701 KRT3P12035 628 aa19.44■□□□□ 0.7
USP39-201ENST00000323701 ADORA2BP29275 332 aa19.44■□□□□ 0.7
USP39-201ENST00000323701 GJC1P36383 396 aa19.44■□□□□ 0.7
USP39-201ENST00000323701 PDE4CQ08493 712 aa19.44■□□□□ 0.7
USP39-201ENST00000323701 TRNP1Q6NT89 227 aa19.44■□□□□ 0.7
USP39-201ENST00000323701 TMCO3Q6UWJ1 677 aa19.44■□□□□ 0.7
USP39-201ENST00000323701 CD300LGQ6UXG3 332 aa19.44■□□□□ 0.7
USP39-201ENST00000323701 SLC35F5Q8WV83 523 aa19.44■□□□□ 0.7
USP39-201ENST00000323701 MCRS1Q96EZ8 462 aa19.44■□□□□ 0.7
USP39-201ENST00000323701 RNF208Q9H0X6 261 aa19.44■□□□□ 0.7
USP39-201ENST00000323701 KLHL11Q9NVR0 708 aa19.44■□□□□ 0.7
USP39-201ENST00000323701 STIM2Q9P246 746 aa19.44■□□□□ 0.7
USP39-201ENST00000323701 AMACRQ9UHK6 382 aa19.44■□□□□ 0.7
USP39-201ENST00000323701 STRIP2Q9ULQ0 834 aa19.44■□□□□ 0.7
USP39-201ENST00000323701 C9IYK1 514 aa19.44■□□□□ 0.7
USP39-201ENST00000323701 CCL5P13501 91 aa19.44■□□□□ 0.7
USP39-201ENST00000323701 DMTNQ08495 405 aa19.44■□□□□ 0.7
USP39-201ENST00000323701 TAF5Q15542 800 aa19.44■□□□□ 0.7
USP39-201ENST00000323701 TOP6BLQ8N6T0 577 aa19.44■□□□□ 0.7
USP39-201ENST00000323701 SLC2A14Q8TDB8 520 aa19.44■□□□□ 0.7
USP39-201ENST00000323701 HASPINQ8TF76 798 aa19.44■□□□□ 0.7
USP39-201ENST00000323701 ZBTB9Q96C00 473 aa19.44■□□□□ 0.7
USP39-201ENST00000323701 B3GNT5Q9BYG0 378 aa19.44■□□□□ 0.7
USP39-201ENST00000323701 RGS18Q9NS28 235 aa19.44■□□□□ 0.7
USP39-201ENST00000323701 OGFRQ9NZT2 677 aa19.44■□□□□ 0.7
USP39-201ENST00000323701 IP6K2Q9UHH9 426 aa19.44■□□□□ 0.7
USP39-201ENST00000323701 ITGB1P05556 798 aa19.43■□□□□ 0.7
USP39-201ENST00000323701 WARSP23381 471 aaKnown RBP19.43■□□□□ 0.7
USP39-201ENST00000323701 SIX1Q15475 284 aaPredicted RBP19.43■□□□□ 0.7
USP39-201ENST00000323701 TCTN1Q2MV58 587 aa19.43■□□□□ 0.7
USP39-201ENST00000323701 TIGD5Q53EQ6 642 aa19.43■□□□□ 0.7
USP39-201ENST00000323701 RAB6CQ53S08 254 aa19.43■□□□□ 0.7
USP39-201ENST00000323701 ARHGAP17Q68EM7 881 aa19.43■□□□□ 0.7
USP39-201ENST00000323701 CCNI2Q6ZMN8 369 aaPredicted RBP19.43■□□□□ 0.7
USP39-201ENST00000323701 FAM183BPQ6ZVS7 135 aa19.43■□□□□ 0.7
USP39-201ENST00000323701 LRRC8DQ7L1W4 858 aa19.43■□□□□ 0.7
USP39-201ENST00000323701 PRELID2Q8N945 189 aa19.43■□□□□ 0.7
USP39-201ENST00000323701 ACSF2Q96CM8 615 aaPredicted RBP19.43■□□□□ 0.7
USP39-201ENST00000323701 GDAP1L1Q96MZ0 367 aa19.43■□□□□ 0.7
USP39-201ENST00000323701 RAB6CQ9H0N0 254 aa19.43■□□□□ 0.7
USP39-201ENST00000323701 GABRDO14764 452 aa19.43■□□□□ 0.7
USP39-201ENST00000323701 HEXIM1O94992 359 aaKnown RBP19.43■□□□□ 0.7
USP39-201ENST00000323701 SSR1P43307 286 aaKnown RBP19.43■□□□□ 0.7
USP39-201ENST00000323701 ATN1P54259 1190 aaPredicted RBP19.43■□□□□ 0.7
USP39-201ENST00000323701 GSCP56915 257 aaPredicted RBP19.43■□□□□ 0.7
USP39-201ENST00000323701 ZNF268Q14587 947 aaPredicted RBP19.43■□□□□ 0.7
USP39-201ENST00000323701 SLC13A5Q86YT5 568 aaPredicted RBP19.43■□□□□ 0.7
USP39-201ENST00000323701 B3GALNT2Q8NCR0 500 aa19.43■□□□□ 0.7
USP39-201ENST00000323701 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.43■□□□□ 0.7
USP39-201ENST00000323701 BEGAINQ9BUH8 593 aa19.43■□□□□ 0.7
USP39-201ENST00000323701 ARFGAP3Q9NP61 516 aa19.43■□□□□ 0.7
USP39-201ENST00000323701 TDRD15B5MCY1 1934 aaKnown RBP19.43■□□□□ 0.7
USP39-201ENST00000323701 CLDN5O00501 218 aa19.42■□□□□ 0.7
USP39-201ENST00000323701 GRAP2O75791 330 aa19.42■□□□□ 0.7
USP39-201ENST00000323701 MNX1P50219 401 aaPredicted RBP19.42■□□□□ 0.7
USP39-201ENST00000323701 CLLU1OSQ5K130 101 aa19.42■□□□□ 0.7
USP39-201ENST00000323701 SCUBE3Q8IX30 993 aa19.42■□□□□ 0.7
USP39-201ENST00000323701 HNRNPLLQ8WVV9 542 aaKnown RBP19.42■□□□□ 0.7
USP39-201ENST00000323701 OGDHLQ9ULD0 1010 aa19.42■□□□□ 0.7
USP39-201ENST00000323701 PQBP1O60828 265 aaKnown RBP19.42■□□□□ 0.7
USP39-201ENST00000323701 SELPP16109 830 aa19.42■□□□□ 0.7
USP39-201ENST00000323701 MAN1A1P33908 653 aa19.42■□□□□ 0.7
USP39-201ENST00000323701 BRCC3P46736 316 aa19.42■□□□□ 0.7
USP39-201ENST00000323701 GUCY2DQ02846 1103 aa19.42■□□□□ 0.7
USP39-201ENST00000323701 STILQ15468 1287 aa19.42■□□□□ 0.7
USP39-201ENST00000323701 FAM102AQ5T9C2 384 aaPredicted RBP19.42■□□□□ 0.7
USP39-201ENST00000323701 SH3PXD2AQ5TCZ1 1133 aa19.42■□□□□ 0.7
USP39-201ENST00000323701 SEL1L2Q5TEA6 688 aa19.42■□□□□ 0.7
USP39-201ENST00000323701 PAQR9Q6ZVX9 377 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms