RNA–Protein interactions for RNA: ENST00000322507.12

COL12A1-201, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL12A1, Length 11,723 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-201ENST00000322507 ORAI2Q96SN7 254 aa10.09□□□□□ -0.79
COL12A1-201ENST00000322507 TULP4Q9NRJ4 1543 aa10.09□□□□□ -0.79
COL12A1-201ENST00000322507 RTN2O75298 545 aa10.09□□□□□ -0.79
COL12A1-201ENST00000322507 SEC31AO94979 1220 aaKnown RBP10.09□□□□□ -0.79
COL12A1-201ENST00000322507 SCNN1DP51172 638 aa10.09□□□□□ -0.79
COL12A1-201ENST00000322507 NPEPPSP55786 919 aa10.09□□□□□ -0.79
COL12A1-201ENST00000322507 RMDN3Q96TC7 470 aa10.09□□□□□ -0.79
COL12A1-201ENST00000322507 HDHD2Q9H0R4 259 aa10.09□□□□□ -0.79
COL12A1-201ENST00000322507 GTSE1Q9NYZ3 720 aa10.09□□□□□ -0.79
COL12A1-201ENST00000322507 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.09□□□□□ -0.79
COL12A1-201ENST00000322507 TUBGCP4Q9UGJ1 667 aa10.09□□□□□ -0.79
COL12A1-201ENST00000322507 MYH15Q9Y2K3 1946 aa10.09□□□□□ -0.79
COL12A1-201ENST00000322507 KCNK1O00180 336 aa10.09□□□□□ -0.79
COL12A1-201ENST00000322507 ALBP02768 609 aa10.09□□□□□ -0.79
COL12A1-201ENST00000322507 HOXD10P28358 340 aa10.09□□□□□ -0.79
COL12A1-201ENST00000322507 GRM4Q14833 912 aa10.09□□□□□ -0.79
COL12A1-201ENST00000322507 PFDN5Q99471 154 aa10.09□□□□□ -0.79
COL12A1-201ENST00000322507 REXO4Q9GZR2 422 aaKnown RBP10.09□□□□□ -0.79
COL12A1-201ENST00000322507 PALLDQ8WX93 1383 aa10.09□□□□□ -0.79
COL12A1-201ENST00000322507 A0A0X1KG70 313 aa10.09□□□□□ -0.79
COL12A1-201ENST00000322507 FCGR1AP12314 374 aa10.09□□□□□ -0.79
COL12A1-201ENST00000322507 MUTP22033 750 aa10.09□□□□□ -0.79
COL12A1-201ENST00000322507 PIK3CBP42338 1070 aa10.09□□□□□ -0.79
COL12A1-201ENST00000322507 MTFR1Q15390 333 aa10.09□□□□□ -0.79
COL12A1-201ENST00000322507 CATSPER4Q7RTX7 472 aa10.09□□□□□ -0.79
COL12A1-201ENST00000322507 FAM32AQ9Y421 112 aaKnown RBP10.09□□□□□ -0.79
COL12A1-201ENST00000322507 C1orf189Q5VU69 101 aa10.09□□□□□ -0.79
COL12A1-201ENST00000322507 LIN54Q6MZP7 749 aa10.09□□□□□ -0.79
COL12A1-201ENST00000322507 HIPK4Q8NE63 616 aa10.09□□□□□ -0.79
COL12A1-201ENST00000322507 OR6B3Q8NGW1 331 aa10.09□□□□□ -0.79
COL12A1-201ENST00000322507 ELOVL6Q9H5J4 265 aa10.09□□□□□ -0.79
COL12A1-201ENST00000322507 NOD2Q9HC29 1040 aa10.09□□□□□ -0.79
COL12A1-201ENST00000322507 BRAFP15056 766 aa10.09□□□□□ -0.79
COL12A1-201ENST00000322507 GGCXP38435 758 aa10.09□□□□□ -0.79
COL12A1-201ENST00000322507 PPP3CCP48454 512 aa10.09□□□□□ -0.79
COL12A1-201ENST00000322507 GPS1Q13098 491 aa10.09□□□□□ -0.79
COL12A1-201ENST00000322507 LRRC6Q86X45 466 aa10.09□□□□□ -0.79
COL12A1-201ENST00000322507 RNF217Q8TC41 542 aa10.09□□□□□ -0.79
COL12A1-201ENST00000322507 MAP3K14Q99558 947 aa10.09□□□□□ -0.79
COL12A1-201ENST00000322507 RIOK2Q9BVS4 552 aaKnown RBP10.09□□□□□ -0.79
COL12A1-201ENST00000322507 PNPLA7Q6ZV29 1317 aa10.09□□□□□ -0.79
COL12A1-201ENST00000322507 VAV1P15498 845 aa10.08□□□□□ -0.8
COL12A1-201ENST00000322507 ACAT1P24752 427 aaKnown RBP10.08□□□□□ -0.8
COL12A1-201ENST00000322507 ADORA1P30542 326 aa10.08□□□□□ -0.8
COL12A1-201ENST00000322507 MAGEA6P43360 314 aa10.08□□□□□ -0.8
COL12A1-201ENST00000322507 ATP2C1P98194 919 aaPredicted RBP10.08□□□□□ -0.8
COL12A1-201ENST00000322507 C1DQ13901 141 aaKnown RBP10.08□□□□□ -0.8
COL12A1-201ENST00000322507 C5orf22Q49AR2 442 aa10.08□□□□□ -0.8
COL12A1-201ENST00000322507 BNIPLQ7Z465 357 aa10.08□□□□□ -0.8
COL12A1-201ENST00000322507 LPAR1Q92633 364 aa10.08□□□□□ -0.8
COL12A1-201ENST00000322507 MTO1Q9Y2Z2 717 aaKnown RBP10.08□□□□□ -0.8
COL12A1-201ENST00000322507 UBXN8O00124 270 aa10.08□□□□□ -0.8
COL12A1-201ENST00000322507 CYP2E1P05181 493 aaPredicted RBP10.08□□□□□ -0.8
COL12A1-201ENST00000322507 SLC9A3P48764 834 aa10.08□□□□□ -0.8
COL12A1-201ENST00000322507 ANXA11P50995 505 aaKnown RBP10.08□□□□□ -0.8
COL12A1-201ENST00000322507 NCKAP1LP55160 1127 aa10.08□□□□□ -0.8
COL12A1-201ENST00000322507 CDK17Q00537 523 aa10.08□□□□□ -0.8
COL12A1-201ENST00000322507 PRR23CQ6ZRP0 262 aa10.08□□□□□ -0.8
COL12A1-201ENST00000322507 KANSL1LA0AUZ9 987 aa10.08□□□□□ -0.8
COL12A1-201ENST00000322507 AGBL2Q5U5Z8 902 aa10.08□□□□□ -0.8
COL12A1-201ENST00000322507 LONP2Q86WA8 852 aa10.08□□□□□ -0.8
COL12A1-201ENST00000322507 SAMD3Q8N6K7 520 aa10.08□□□□□ -0.8
COL12A1-201ENST00000322507 CCDC126Q96EE4 140 aa10.08□□□□□ -0.8
COL12A1-201ENST00000322507 PLGRKTQ9HBL7 147 aa10.08□□□□□ -0.8
COL12A1-201ENST00000322507 NEXMIFQ5QGS0 1516 aa10.08□□□□□ -0.8
COL12A1-201ENST00000322507 ITIH2P19823 946 aa10.08□□□□□ -0.8
COL12A1-201ENST00000322507 ACADLP28330 430 aa10.08□□□□□ -0.8
COL12A1-201ENST00000322507 SKIV2L2P42285 1042 aaKnown RBP10.08□□□□□ -0.8
COL12A1-201ENST00000322507 MAGEA10P43363 369 aaPredicted RBP10.08□□□□□ -0.8
COL12A1-201ENST00000322507 SLCO1A2P46721 670 aa10.08□□□□□ -0.8
COL12A1-201ENST00000322507 FAR2Q96K12 515 aa10.08□□□□□ -0.8
COL12A1-201ENST00000322507 CCSER1Q9C0I3 900 aa10.08□□□□□ -0.8
COL12A1-201ENST00000322507 TRIM49BA6NDI0 452 aa10.08□□□□□ -0.8
COL12A1-201ENST00000322507 TRIM49D1C9J1S8 452 aa10.08□□□□□ -0.8
COL12A1-201ENST00000322507 LINC00523Q86TU6 105 aa10.08□□□□□ -0.8
COL12A1-201ENST00000322507 STRBPQ96SI9 672 aaKnown RBP10.08□□□□□ -0.8
COL12A1-201ENST00000322507 GPC6Q9Y625 555 aaPredicted RBP10.08□□□□□ -0.8
COL12A1-201ENST00000322507 IL18RAPO95256 599 aa10.08□□□□□ -0.8
COL12A1-201ENST00000322507 DALRD3Q5D0E6 543 aaKnown RBP10.08□□□□□ -0.8
COL12A1-201ENST00000322507 C12orf50Q8NA57 414 aaPredicted RBP10.08□□□□□ -0.8
COL12A1-201ENST00000322507 HPS3Q969F9 1004 aa10.08□□□□□ -0.8
COL12A1-201ENST00000322507 MASTLQ96GX5 879 aa10.08□□□□□ -0.8
COL12A1-201ENST00000322507 RSPH9Q9H1X1 276 aaPredicted RBP10.08□□□□□ -0.8
COL12A1-201ENST00000322507 TELO2Q9Y4R8 837 aa10.08□□□□□ -0.8
COL12A1-201ENST00000322507 ADGRB3O60242 1522 aa10.08□□□□□ -0.8
COL12A1-201ENST00000322507 E9PCH4 1651 aa10.08□□□□□ -0.8
COL12A1-201ENST00000322507 P4HBP07237 508 aaKnown RBP10.08□□□□□ -0.8
COL12A1-201ENST00000322507 TYK2P29597 1187 aa10.08□□□□□ -0.8
COL12A1-201ENST00000322507 ARHGDIBP52566 201 aa10.08□□□□□ -0.8
COL12A1-201ENST00000322507 HOXC6P09630 235 aa10.08□□□□□ -0.8
COL12A1-201ENST00000322507 ACADSBP45954 432 aa10.08□□□□□ -0.8
COL12A1-201ENST00000322507 CDC16Q13042 620 aa10.08□□□□□ -0.8
COL12A1-201ENST00000322507 MTERF2Q49AM1 385 aa10.08□□□□□ -0.8
COL12A1-201ENST00000322507 PEG10Q86TG7 708 aaKnown RBP10.08□□□□□ -0.8
COL12A1-201ENST00000322507 SMYD4Q8IYR2 804 aaPredicted RBP10.08□□□□□ -0.8
COL12A1-201ENST00000322507 MIEF2Q96C03 454 aa10.08□□□□□ -0.8
COL12A1-201ENST00000322507 CDCA5Q96FF9 252 aa10.08□□□□□ -0.8
COL12A1-201ENST00000322507 EVPLQ92817 2033 aa10.08□□□□□ -0.8
COL12A1-201ENST00000322507 A0A1W2PQJ5 194 aa10.08□□□□□ -0.8
COL12A1-201ENST00000322507 TRPC4APQ8TEL6 797 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms