RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 MAGEB2O15479 319 aa23.51■■□□□ 1.35
PNKP-201ENST00000322344 RASSF9O75901 435 aa23.51■■□□□ 1.35
PNKP-201ENST00000322344 TMEM192Q8IY95 271 aa23.51■■□□□ 1.35
PNKP-201ENST00000322344 SLC4A11Q8NBS3 891 aa23.51■■□□□ 1.35
PNKP-201ENST00000322344 ACSF2Q96CM8 615 aaPredicted RBP23.51■■□□□ 1.35
PNKP-201ENST00000322344 SGSM3Q96HU1 749 aa23.51■■□□□ 1.35
PNKP-201ENST00000322344 SDCBP2Q9H190 292 aa23.51■■□□□ 1.35
PNKP-201ENST00000322344 CILPO75339 1184 aa23.5■■□□□ 1.35
PNKP-201ENST00000322344 ETS1P14921 441 aa23.5■■□□□ 1.35
PNKP-201ENST00000322344 KDELR1P24390 212 aa23.5■■□□□ 1.35
PNKP-201ENST00000322344 STX2P32856 288 aa23.5■■□□□ 1.35
PNKP-201ENST00000322344 GABRB2P47870 512 aa23.5■■□□□ 1.35
PNKP-201ENST00000322344 SPRED3Q2MJR0 410 aa23.5■■□□□ 1.35
PNKP-201ENST00000322344 CHADLQ6NUI6 762 aa23.5■■□□□ 1.35
PNKP-201ENST00000322344 SRRM1Q8IYB3 904 aaKnown RBP23.5■■□□□ 1.35
PNKP-201ENST00000322344 HAUS1Q96CS2 278 aa23.5■■□□□ 1.35
PNKP-201ENST00000322344 TMEM176AQ96HP8 235 aa23.5■■□□□ 1.35
PNKP-201ENST00000322344 MAGEB18Q96M61 343 aa23.5■■□□□ 1.35
PNKP-201ENST00000322344 CPXM1Q96SM3 734 aa23.5■■□□□ 1.35
PNKP-201ENST00000322344 PLCD4Q9BRC7 762 aa23.5■■□□□ 1.35
PNKP-201ENST00000322344 ZWILCHQ9H900 591 aa23.5■■□□□ 1.35
PNKP-201ENST00000322344 IFT122Q9HBG6 1241 aa23.5■■□□□ 1.35
PNKP-201ENST00000322344 SLC40A1Q9NP59 571 aa23.5■■□□□ 1.35
PNKP-201ENST00000322344 TBK1Q9UHD2 729 aa23.5■■□□□ 1.35
PNKP-201ENST00000322344 USP15Q9Y4E8 981 aaPredicted RBP23.5■■□□□ 1.35
PNKP-201ENST00000322344 ANK1P16157 1881 aa23.5■■□□□ 1.35
PNKP-201ENST00000322344 ITGB3P05106 788 aa23.5■■□□□ 1.35
PNKP-201ENST00000322344 CDH8P55286 799 aa23.5■■□□□ 1.35
PNKP-201ENST00000322344 MOGSQ13724 837 aa23.5■■□□□ 1.35
PNKP-201ENST00000322344 LAMC2Q13753 1193 aa23.5■■□□□ 1.35
PNKP-201ENST00000322344 RASA2Q15283 850 aa23.5■■□□□ 1.35
PNKP-201ENST00000322344 JADE1Q6IE81 842 aa23.5■■□□□ 1.35
PNKP-201ENST00000322344 TRPM8Q7Z2W7 1104 aa23.5■■□□□ 1.35
PNKP-201ENST00000322344 ARFGAP1Q8N6T3 406 aa23.5■■□□□ 1.35
PNKP-201ENST00000322344 PRCCQ92733 491 aaPredicted RBP23.5■■□□□ 1.35
PNKP-201ENST00000322344 TMEM121Q9BTD3 319 aa23.5■■□□□ 1.35
PNKP-201ENST00000322344 METTL5Q9NRN9 209 aaKnown RBP23.5■■□□□ 1.35
PNKP-201ENST00000322344 SENP1Q9P0U3 644 aa23.5■■□□□ 1.35
PNKP-201ENST00000322344 RASA4BC9J798 803 aa23.49■■□□□ 1.35
PNKP-201ENST00000322344 RASA4O43374 803 aa23.49■■□□□ 1.35
PNKP-201ENST00000322344 SUN1O94901 812 aa23.49■■□□□ 1.35
PNKP-201ENST00000322344 IQCF3P0C7M6 154 aa23.49■■□□□ 1.35
PNKP-201ENST00000322344 VDRP11473 427 aa23.49■■□□□ 1.35
PNKP-201ENST00000322344 MPP2Q14168 576 aa23.49■■□□□ 1.35
PNKP-201ENST00000322344 TMED2Q15363 201 aa23.49■■□□□ 1.35
PNKP-201ENST00000322344 WDR78Q5VTH9 848 aa23.49■■□□□ 1.35
PNKP-201ENST00000322344 TTC39CQ8N584 583 aa23.49■■□□□ 1.35
PNKP-201ENST00000322344 ACTL9Q8TC94 416 aa23.49■■□□□ 1.35
PNKP-201ENST00000322344 MCRS1Q96EZ8 462 aa23.49■■□□□ 1.35
PNKP-201ENST00000322344 ELOVL4Q9GZR5 314 aa23.49■■□□□ 1.35
PNKP-201ENST00000322344 RNPEPQ9H4A4 650 aa23.49■■□□□ 1.35
PNKP-201ENST00000322344 SMYD3Q9H7B4 428 aa23.49■■□□□ 1.35
PNKP-201ENST00000322344 WDR3Q9UNX4 943 aaKnown RBP eCLIP23.49■■□□□ 1.353e-6■■■■□ 21.1
PNKP-201ENST00000322344 SMAPO00193 183 aa23.49■■□□□ 1.35
PNKP-201ENST00000322344 CST8O60676 142 aa23.49■■□□□ 1.35
PNKP-201ENST00000322344 MICAL2O94851 1124 aa23.49■■□□□ 1.35
PNKP-201ENST00000322344 HMGCRP04035 888 aa23.49■■□□□ 1.35
PNKP-201ENST00000322344 ERBB2P04626 1255 aa23.49■■□□□ 1.35
PNKP-201ENST00000322344 INSRRP14616 1297 aa23.49■■□□□ 1.35
PNKP-201ENST00000322344 IL1R2P27930 398 aa23.49■■□□□ 1.35
PNKP-201ENST00000322344 SLC18A1P54219 525 aa23.49■■□□□ 1.35
PNKP-201ENST00000322344 OTUD4Q01804 1114 aaKnown RBP23.49■■□□□ 1.35
PNKP-201ENST00000322344 MYO1EQ12965 1108 aa23.49■■□□□ 1.35
PNKP-201ENST00000322344 XRCC4Q13426 336 aa23.49■■□□□ 1.35
PNKP-201ENST00000322344 AMHR2Q16671 573 aa23.49■■□□□ 1.35
PNKP-201ENST00000322344 LINC01465Q8N7H1 131 aa23.49■■□□□ 1.35
PNKP-201ENST00000322344 CXorf38Q8TB03 319 aa23.49■■□□□ 1.35
PNKP-201ENST00000322344 PDZD7Q9H5P4 517 aa23.49■■□□□ 1.35
PNKP-201ENST00000322344 PDGFCQ9NRA1 345 aa23.49■■□□□ 1.35
PNKP-201ENST00000322344 SLC24A2Q9UI40 661 aa23.49■■□□□ 1.35
PNKP-201ENST00000322344 FARP1Q9Y4F1 1045 aaPredicted RBP23.49■■□□□ 1.35
PNKP-201ENST00000322344 DYNC1LI1Q9Y6G9 523 aaKnown RBP23.49■■□□□ 1.35
PNKP-201ENST00000322344 RNF8O76064 485 aa23.48■■□□□ 1.35
PNKP-201ENST00000322344 IFNB1P01574 187 aa23.48■■□□□ 1.35
PNKP-201ENST00000322344 ARHGAP1Q07960 439 aa23.48■■□□□ 1.35
PNKP-201ENST00000322344 NUGGCQ68CJ6 796 aa23.48■■□□□ 1.35
PNKP-201ENST00000322344 TRABD2AQ86V40 505 aa23.48■■□□□ 1.35
PNKP-201ENST00000322344 PPIL6Q8IXY8 311 aa23.48■■□□□ 1.35
PNKP-201ENST00000322344 MIS12Q9H081 205 aa23.48■■□□□ 1.35
PNKP-201ENST00000322344 KLC4Q9NSK0 619 aa23.48■■□□□ 1.35
PNKP-201ENST00000322344 FGFR1OP2Q9NVK5 253 aa23.48■■□□□ 1.35
PNKP-201ENST00000322344 TJP2Q9UDY2 1190 aa23.48■■□□□ 1.35
PNKP-201ENST00000322344 COL1A2P08123 1366 aa23.48■■□□□ 1.35
PNKP-201ENST00000322344 FAM47DPA6NHR8 397 aa23.47■■□□□ 1.35
PNKP-201ENST00000322344 IGBP1P78318 339 aa23.47■■□□□ 1.35
PNKP-201ENST00000322344 IL9RQ01113 521 aa23.47■■□□□ 1.35
PNKP-201ENST00000322344 ICE2Q659A1 982 aa23.47■■□□□ 1.35
PNKP-201ENST00000322344 CMASQ8NFW8 434 aaPredicted RBP23.47■■□□□ 1.35
PNKP-201ENST00000322344 TWNKQ96RR1 684 aa23.47■■□□□ 1.35
PNKP-201ENST00000322344 TGS1Q96RS0 853 aaKnown RBP23.47■■□□□ 1.35
PNKP-201ENST00000322344 ASNSD1Q9NWL6 643 aa23.47■■□□□ 1.35
PNKP-201ENST00000322344 KIAA1257Q9ULG3 409 aa23.47■■□□□ 1.35
PNKP-201ENST00000322344 SLC12A4Q9UP95 1085 aa23.47■■□□□ 1.35
PNKP-201ENST00000322344 A0A087WZ62 844 aa23.47■■□□□ 1.35
PNKP-201ENST00000322344 STAU1O95793 577 aaKnown RBP23.47■■□□□ 1.35
PNKP-201ENST00000322344 LGALS2P05162 132 aa23.47■■□□□ 1.35
PNKP-201ENST00000322344 GCAP28676 217 aa23.47■■□□□ 1.35
PNKP-201ENST00000322344 TTLL12Q14166 644 aaPredicted RBP23.47■■□□□ 1.35
PNKP-201ENST00000322344 SMTNL2Q2TAL5 461 aa23.47■■□□□ 1.35
PNKP-201ENST00000322344 TMEM63BQ5T3F8 832 aa23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms