RNA–Protein interactions for RNA: ENST00000321728.11

PRKCB-202, Transcript of protein kinase C beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRKCB, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-202ENST00000321728 AP2B1P63010 937 aa18.75■□□□□ 0.59
PRKCB-202ENST00000321728 WDR44Q5JSH3 913 aa18.75■□□□□ 0.59
PRKCB-202ENST00000321728 CFAP157Q5JU67 520 aa18.75■□□□□ 0.59
PRKCB-202ENST00000321728 PLEKHA7Q6IQ23 1121 aa18.75■□□□□ 0.59
PRKCB-202ENST00000321728 RBM15BQ8NDT2 890 aaKnown RBP18.75■□□□□ 0.59
PRKCB-202ENST00000321728 ACER1Q8TDN7 264 aa18.75■□□□□ 0.59
PRKCB-202ENST00000321728 MFSD14AQ96MC6 490 aa18.75■□□□□ 0.59
PRKCB-202ENST00000321728 THTPAQ9BU02 230 aa18.75■□□□□ 0.59
PRKCB-202ENST00000321728 PHACTR1Q9C0D0 580 aa18.75■□□□□ 0.59
PRKCB-202ENST00000321728 KCNH7Q9NS40 1196 aa18.75■□□□□ 0.59
PRKCB-202ENST00000321728 SAE1Q9UBE0 346 aaPredicted RBP18.75■□□□□ 0.59
PRKCB-202ENST00000321728 PPARGC1AQ9UBK2 798 aaKnown RBP18.75■□□□□ 0.59
PRKCB-202ENST00000321728 FETUBQ9UGM5 382 aa18.75■□□□□ 0.59
PRKCB-202ENST00000321728 NDC80O14777 642 aa18.75■□□□□ 0.59
PRKCB-202ENST00000321728 MAGEC1O60732 1142 aa18.75■□□□□ 0.59
PRKCB-202ENST00000321728 GTF2H1P32780 548 aa18.75■□□□□ 0.59
PRKCB-202ENST00000321728 DYNLT1P63172 113 aa18.75■□□□□ 0.59
PRKCB-202ENST00000321728 NOMO3P69849 1222 aa18.75■□□□□ 0.59
PRKCB-202ENST00000321728 SPOPLQ6IQ16 392 aa18.75■□□□□ 0.59
PRKCB-202ENST00000321728 SMC1BQ8NDV3 1235 aa18.75■□□□□ 0.59
PRKCB-202ENST00000321728 NDNQ99608 321 aa18.75■□□□□ 0.59
PRKCB-202ENST00000321728 CENPKQ9BS16 269 aa18.75■□□□□ 0.59
PRKCB-202ENST00000321728 DHRS4Q9BTZ2 278 aa18.75■□□□□ 0.59
PRKCB-202ENST00000321728 UBE2OQ9C0C9 1292 aaKnown RBP18.75■□□□□ 0.59
PRKCB-202ENST00000321728 PARVAQ9NVD7 372 aa18.75■□□□□ 0.59
PRKCB-202ENST00000321728 LOXHD1Q8IVV2 1947 aa18.75■□□□□ 0.59
PRKCB-202ENST00000321728 USP1O94782 785 aa18.74■□□□□ 0.59
PRKCB-202ENST00000321728 ITGAVP06756 1048 aa18.74■□□□□ 0.59
PRKCB-202ENST00000321728 PSMC4P43686 418 aa18.74■□□□□ 0.59
PRKCB-202ENST00000321728 TBC1D25Q3MII6 688 aa18.74■□□□□ 0.59
PRKCB-202ENST00000321728 BRDTQ58F21 947 aaPredicted RBP18.74■□□□□ 0.59
PRKCB-202ENST00000321728 C1orf146Q5VVC0 180 aa18.74■□□□□ 0.59
PRKCB-202ENST00000321728 FAM43BQ6ZT52 329 aaPredicted RBP18.74■□□□□ 0.59
PRKCB-202ENST00000321728 NET1Q7Z628 596 aaPredicted RBP18.74■□□□□ 0.59
PRKCB-202ENST00000321728 PCGF5Q86SE9 256 aa18.74■□□□□ 0.59
PRKCB-202ENST00000321728 PPIL6Q8IXY8 311 aa18.74■□□□□ 0.59
PRKCB-202ENST00000321728 FAM81AQ8TBF8 368 aa18.74■□□□□ 0.59
PRKCB-202ENST00000321728 PANX3Q96QZ0 392 aa18.74■□□□□ 0.59
PRKCB-202ENST00000321728 FAM213AQ9BRX8 229 aa18.74■□□□□ 0.59
PRKCB-202ENST00000321728 PYGBP11216 843 aa18.74■□□□□ 0.59
PRKCB-202ENST00000321728 GNA15P30679 374 aa18.74■□□□□ 0.59
PRKCB-202ENST00000321728 PTK7Q13308 1070 aa18.74■□□□□ 0.59
PRKCB-202ENST00000321728 TMEM270Q6UE05 265 aa18.74■□□□□ 0.59
PRKCB-202ENST00000321728 CHSY1Q86X52 802 aa18.74■□□□□ 0.59
PRKCB-202ENST00000321728 TREML1Q86YW5 311 aa18.74■□□□□ 0.59
PRKCB-202ENST00000321728 TMEM161BQ8NDZ6 487 aa18.74■□□□□ 0.59
PRKCB-202ENST00000321728 AZIN2Q96A70 460 aa18.74■□□□□ 0.59
PRKCB-202ENST00000321728 SERAC1Q96JX3 654 aa18.74■□□□□ 0.59
PRKCB-202ENST00000321728 SCAF8Q9UPN6 1271 aaKnown RBP18.74■□□□□ 0.59
PRKCB-202ENST00000321728 FARP1Q9Y4F1 1045 aaPredicted RBP18.74■□□□□ 0.59
PRKCB-202ENST00000321728 PCDHB4Q9Y5E5 795 aa18.74■□□□□ 0.59
PRKCB-202ENST00000321728 E5RJQ4 531 aa18.73■□□□□ 0.59
PRKCB-202ENST00000321728 F8VP50 259 aa18.73■□□□□ 0.59
PRKCB-202ENST00000321728 ETS2P15036 469 aa18.73■□□□□ 0.59
PRKCB-202ENST00000321728 DLGAP5Q15398 846 aa18.73■□□□□ 0.59
PRKCB-202ENST00000321728 TRMT5Q32P41 509 aaKnown RBP18.73■□□□□ 0.59
PRKCB-202ENST00000321728 LIN52Q52LA3 116 aa18.73■□□□□ 0.59
PRKCB-202ENST00000321728 XKR9Q5GH70 373 aa18.73■□□□□ 0.59
PRKCB-202ENST00000321728 TFDP3Q5H9I0 405 aa18.73■□□□□ 0.59
PRKCB-202ENST00000321728 PLA2G4FQ68DD2 849 aa18.73■□□□□ 0.59
PRKCB-202ENST00000321728 TXNRD3NBQ6F5E7 133 aa18.73■□□□□ 0.59
PRKCB-202ENST00000321728 MAP4K3Q8IVH8 894 aa18.73■□□□□ 0.59
PRKCB-202ENST00000321728 SP8Q8IXZ3 490 aa18.73■□□□□ 0.59
PRKCB-202ENST00000321728 ULK2Q8IYT8 1036 aa18.73■□□□□ 0.59
PRKCB-202ENST00000321728 ABRAQ8N0Z2 381 aa18.73■□□□□ 0.59
PRKCB-202ENST00000321728 SLC25A41Q8N5S1 370 aa18.73■□□□□ 0.59
PRKCB-202ENST00000321728 CPT1BQ92523 772 aa18.73■□□□□ 0.59
PRKCB-202ENST00000321728 DTNBP1Q96EV8 351 aa18.73■□□□□ 0.59
PRKCB-202ENST00000321728 APOPT1Q96IL0 206 aa18.73■□□□□ 0.59
PRKCB-202ENST00000321728 IQCGQ9H095 443 aaKnown RBP18.73■□□□□ 0.59
PRKCB-202ENST00000321728 MRPL11Q9Y3B7 192 aaKnown RBP18.73■□□□□ 0.59
PRKCB-202ENST00000321728 IQANK1A0A1B0GTG1 560 aa18.73■□□□□ 0.59
PRKCB-202ENST00000321728 NPTX2P47972 431 aa18.73■□□□□ 0.59
PRKCB-202ENST00000321728 DMP1Q13316 513 aaPredicted RBP18.73■□□□□ 0.59
PRKCB-202ENST00000321728 NKD2Q969F2 451 aaPredicted RBP18.73■□□□□ 0.59
PRKCB-202ENST00000321728 WDR83Q9BRX9 315 aaKnown RBP18.73■□□□□ 0.59
PRKCB-202ENST00000321728 SNCAIPQ9Y6H5 919 aa18.73■□□□□ 0.59
PRKCB-202ENST00000321728 NFASCO94856 1347 aa18.73■□□□□ 0.59
PRKCB-202ENST00000321728 hCG_1818297A0A087WSY0 165 aa18.72■□□□□ 0.59
PRKCB-202ENST00000321728 ZC3H11AO75152 810 aaKnown RBP eCLIP18.72■□□□□ 0.598e-6■■□□□ 11.8
PRKCB-202ENST00000321728 DHRS4L1P0CG22 281 aa18.72■□□□□ 0.59
PRKCB-202ENST00000321728 HOXA10P31260 410 aaPredicted RBP18.72■□□□□ 0.59
PRKCB-202ENST00000321728 ETV4P43268 484 aa18.72■□□□□ 0.59
PRKCB-202ENST00000321728 CDK7P50613 346 aa18.72■□□□□ 0.59
PRKCB-202ENST00000321728 CDC16Q13042 620 aa18.72■□□□□ 0.59
PRKCB-202ENST00000321728 TRIM72Q6ZMU5 477 aa18.72■□□□□ 0.59
PRKCB-202ENST00000321728 OPTNQ96CV9 577 aa18.72■□□□□ 0.59
PRKCB-202ENST00000321728 KMT5AQ9NQR1 393 aa18.72■□□□□ 0.59
PRKCB-202ENST00000321728 FBXO28Q9NVF7 368 aa18.72■□□□□ 0.59
PRKCB-202ENST00000321728 PPM1HQ9ULR3 514 aa18.72■□□□□ 0.59
PRKCB-202ENST00000321728 CHMP2BQ9UQN3 213 aa18.72■□□□□ 0.59
PRKCB-202ENST00000321728 SPECC1L-ADORA2AF8WAN1 911 aa18.72■□□□□ 0.59
PRKCB-202ENST00000321728 I3L4J1 428 aa18.72■□□□□ 0.59
PRKCB-202ENST00000321728 HNRNPDLO14979 420 aaKnown RBP18.72■□□□□ 0.59
PRKCB-202ENST00000321728 OPHN1O60890 802 aa18.72■□□□□ 0.59
PRKCB-202ENST00000321728 TM7SF2O76062 418 aa18.72■□□□□ 0.59
PRKCB-202ENST00000321728 TNNI1P19237 187 aa18.72■□□□□ 0.59
PRKCB-202ENST00000321728 GDF10P55107 478 aa18.72■□□□□ 0.59
PRKCB-202ENST00000321728 PSMC5P62195 406 aa18.72■□□□□ 0.59
PRKCB-202ENST00000321728 CIAPIN1Q6FI81 312 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms