RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 PASD1Q8IV76 773 aa13.79□□□□□ -0.2
CPNE1-201ENST00000317677 MCOLN2Q8IZK6 566 aa13.79□□□□□ -0.2
CPNE1-201ENST00000317677 AGAP11Q8TF27 550 aa13.79□□□□□ -0.2
CPNE1-201ENST00000317677 EPAS1Q99814 870 aa13.79□□□□□ -0.2
CPNE1-201ENST00000317677 NUP85Q9BW27 656 aa13.79□□□□□ -0.2
CPNE1-201ENST00000317677 EIF2AQ9BY44 585 aaKnown RBP13.79□□□□□ -0.2
CPNE1-201ENST00000317677 CISHQ9NSE2 258 aa13.79□□□□□ -0.2
CPNE1-201ENST00000317677 LMCD1Q9NZU5 365 aa13.79□□□□□ -0.2
CPNE1-201ENST00000317677 TMEM59LQ9UK28 342 aa13.79□□□□□ -0.2
CPNE1-201ENST00000317677 AMFRQ9UKV5 643 aa13.79□□□□□ -0.2
CPNE1-201ENST00000317677 ALG6Q9Y672 507 aa13.79□□□□□ -0.2
CPNE1-201ENST00000317677 ITGB3P05106 788 aa13.78□□□□□ -0.2
CPNE1-201ENST00000317677 DARSP14868 501 aaKnown RBP13.78□□□□□ -0.2
CPNE1-201ENST00000317677 PAFAH1B1P43034 410 aa13.78□□□□□ -0.2
CPNE1-201ENST00000317677 FLT3LGP49771 235 aa13.78□□□□□ -0.2
CPNE1-201ENST00000317677 BPIFB4P59827 614 aa13.78□□□□□ -0.2
CPNE1-201ENST00000317677 SLC7A5Q01650 507 aa13.78□□□□□ -0.2
CPNE1-201ENST00000317677 POU5F1Q01860 360 aaKnown RBP13.78□□□□□ -0.2
CPNE1-201ENST00000317677 TRPC3Q13507 836 aa13.78□□□□□ -0.2
CPNE1-201ENST00000317677 C1QTNF12Q5T7M4 302 aa13.78□□□□□ -0.2
CPNE1-201ENST00000317677 C11orf63Q6NUN7 778 aa13.78□□□□□ -0.2
CPNE1-201ENST00000317677 C8orf74Q6P047 294 aa13.78□□□□□ -0.2
CPNE1-201ENST00000317677 MON1BQ7L1V2 547 aa13.78□□□□□ -0.2
CPNE1-201ENST00000317677 PHLDB2Q86SQ0 1253 aa13.78□□□□□ -0.2
CPNE1-201ENST00000317677 RASGEF1CQ8N431 466 aa13.78□□□□□ -0.2
CPNE1-201ENST00000317677 USP38Q8NB14 1042 aa13.78□□□□□ -0.2
CPNE1-201ENST00000317677 ATL2Q8NHH9 583 aa13.78□□□□□ -0.2
CPNE1-201ENST00000317677 B4GALNT2Q8NHY0 566 aa13.78□□□□□ -0.2
CPNE1-201ENST00000317677 ZNF564Q8TBZ8 553 aaPredicted RBP13.78□□□□□ -0.2
CPNE1-201ENST00000317677 RAPGEF5Q92565 580 aa13.78□□□□□ -0.2
CPNE1-201ENST00000317677 ALG3Q92685 438 aa13.78□□□□□ -0.2
CPNE1-201ENST00000317677 TAF4BQ92750 862 aa13.78□□□□□ -0.2
CPNE1-201ENST00000317677 HINFPQ9BQA5 517 aa13.78□□□□□ -0.2
CPNE1-201ENST00000317677 GCOM2Q9BZD3 368 aaPredicted RBP13.78□□□□□ -0.2
CPNE1-201ENST00000317677 IMPG2Q9BZV3 1241 aa13.78□□□□□ -0.2
CPNE1-201ENST00000317677 TRIM7Q9C029 511 aa13.78□□□□□ -0.2
CPNE1-201ENST00000317677 ASB7Q9H672 318 aa13.78□□□□□ -0.2
CPNE1-201ENST00000317677 ASB3Q9Y575 518 aa13.78□□□□□ -0.2
CPNE1-201ENST00000317677 CEP104O60308 925 aa13.78□□□□□ -0.2
CPNE1-201ENST00000317677 DIAPH2O60879 1101 aa13.78□□□□□ -0.2
CPNE1-201ENST00000317677 DUSP11O75319 330 aaKnown RBP13.78□□□□□ -0.2
CPNE1-201ENST00000317677 RNF8O76064 485 aa13.78□□□□□ -0.2
CPNE1-201ENST00000317677 MYZAPP0CAP1 466 aa13.78□□□□□ -0.2
CPNE1-201ENST00000317677 GNAT1P11488 350 aa13.78□□□□□ -0.2
CPNE1-201ENST00000317677 GRM5P41594 1212 aa13.78□□□□□ -0.2
CPNE1-201ENST00000317677 PRKCZQ05513 592 aa13.78□□□□□ -0.2
CPNE1-201ENST00000317677 PTP4A2Q12974 167 aa13.78□□□□□ -0.2
CPNE1-201ENST00000317677 ZNF513Q8N8E2 541 aaPredicted RBP13.78□□□□□ -0.2
CPNE1-201ENST00000317677 ZNF606Q8WXB4 792 aa13.78□□□□□ -0.2
CPNE1-201ENST00000317677 TFAP2BQ92481 460 aa13.78□□□□□ -0.2
CPNE1-201ENST00000317677 KRT35Q92764 455 aa13.78□□□□□ -0.2
CPNE1-201ENST00000317677 CD101Q93033 1021 aa13.78□□□□□ -0.2
CPNE1-201ENST00000317677 ZNF333Q96JL9 665 aa13.78□□□□□ -0.2
CPNE1-201ENST00000317677 PBKQ96KB5 322 aa13.78□□□□□ -0.2
CPNE1-201ENST00000317677 BCO2Q9BYV7 579 aa13.78□□□□□ -0.2
CPNE1-201ENST00000317677 CNOT8Q9UFF9 292 aaKnown RBP13.78□□□□□ -0.2
CPNE1-201ENST00000317677 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.78□□□□□ -0.22e-6■■■■■ 55.4
CPNE1-201ENST00000317677 L3MBTL1Q9Y468 752 aa13.78□□□□□ -0.2
CPNE1-201ENST00000317677 SCN1AP35498 2009 aa13.78□□□□□ -0.2
CPNE1-201ENST00000317677 GOLGA6L10A0A0M3HER8 536 aa13.77□□□□□ -0.21
CPNE1-201ENST00000317677 TMEM110-MUSTN1A8MSY1 372 aa13.77□□□□□ -0.21
CPNE1-201ENST00000317677 H0YGN5 161 aa13.77□□□□□ -0.21
CPNE1-201ENST00000317677 THAP12O43422 761 aa13.77□□□□□ -0.21
CPNE1-201ENST00000317677 KRT19P08727 400 aa13.77□□□□□ -0.21
CPNE1-201ENST00000317677 FAM163BP0C2L3 166 aa13.77□□□□□ -0.21
CPNE1-201ENST00000317677 RRM1P23921 792 aa13.77□□□□□ -0.21
CPNE1-201ENST00000317677 ABL2P42684 1182 aa13.77□□□□□ -0.21
CPNE1-201ENST00000317677 CDH8P55286 799 aa13.77□□□□□ -0.21
CPNE1-201ENST00000317677 GJA9P57773 515 aa13.77□□□□□ -0.21
CPNE1-201ENST00000317677 PPP2R2AP63151 447 aa13.77□□□□□ -0.21
CPNE1-201ENST00000317677 SNX17Q15036 470 aa13.77□□□□□ -0.21
CPNE1-201ENST00000317677 ZNF394Q53GI3 561 aa13.77□□□□□ -0.21
CPNE1-201ENST00000317677 CATSPER4Q7RTX7 472 aa13.77□□□□□ -0.21
CPNE1-201ENST00000317677 ANKS4BQ8N8V4 417 aa13.77□□□□□ -0.21
CPNE1-201ENST00000317677 CCDC197Q8NCU1 140 aa13.77□□□□□ -0.21
CPNE1-201ENST00000317677 ACTRT1Q8TDG2 376 aa13.77□□□□□ -0.21
CPNE1-201ENST00000317677 ZMAT2Q96NC0 199 aaKnown RBP13.77□□□□□ -0.21
CPNE1-201ENST00000317677 ACAP3Q96P50 834 aa13.77□□□□□ -0.21
CPNE1-201ENST00000317677 GORASP1Q9BQQ3 440 aa13.77□□□□□ -0.21
CPNE1-201ENST00000317677 SMYD3Q9H7B4 428 aa13.77□□□□□ -0.21
CPNE1-201ENST00000317677 SUDS3Q9H7L9 328 aaPredicted RBP13.77□□□□□ -0.21
CPNE1-201ENST00000317677 SNTG2Q9NY99 539 aa13.77□□□□□ -0.21
CPNE1-201ENST00000317677 NXF1Q9UBU9 619 aaKnown RBP13.77□□□□□ -0.21
CPNE1-201ENST00000317677 NOC2LQ9Y3T9 749 aaKnown RBP13.77□□□□□ -0.21
CPNE1-201ENST00000317677 HES2Q9Y543 173 aa13.77□□□□□ -0.21
CPNE1-201ENST00000317677 NFS1Q9Y697 457 aa13.77□□□□□ -0.21
CPNE1-201ENST00000317677 SMIM24O75264 130 aa13.76□□□□□ -0.21
CPNE1-201ENST00000317677 PGK1P00558 417 aa13.76□□□□□ -0.21
CPNE1-201ENST00000317677 C6orf222P0C671 652 aaPredicted RBP13.76□□□□□ -0.21
CPNE1-201ENST00000317677 FAM153BP0C7A2 387 aa13.76□□□□□ -0.21
CPNE1-201ENST00000317677 COMTP21964 271 aa13.76□□□□□ -0.21
CPNE1-201ENST00000317677 EIF4BP23588 611 aaKnown RBP13.76□□□□□ -0.21
CPNE1-201ENST00000317677 CARSP49589 748 aaKnown RBP13.76□□□□□ -0.21
CPNE1-201ENST00000317677 MESDQ14696 234 aa13.76□□□□□ -0.21
CPNE1-201ENST00000317677 FAM153CQ494X1 144 aa13.76□□□□□ -0.21
CPNE1-201ENST00000317677 AADACL2Q6P093 401 aa13.76□□□□□ -0.21
CPNE1-201ENST00000317677 CPLX4Q7Z7G2 160 aa13.76□□□□□ -0.21
CPNE1-201ENST00000317677 WNT8BQ93098 351 aa13.76□□□□□ -0.21
CPNE1-201ENST00000317677 RBM41Q96IZ5 413 aaKnown RBP13.76□□□□□ -0.21
CPNE1-201ENST00000317677 TWNKQ96RR1 684 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms