RNA–Protein interactions for RNA: ENST00000315994.6

SH3PXD2A-201, Transcript of SH3 and PX domains 2A, humanhuman

TSL 1 (best)

Gene SH3PXD2A, Length 5,504 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3PXD2A-201ENST00000315994 DRC3Q9H069 523 aa13.39□□□□□ -0.27
SH3PXD2A-201ENST00000315994 LRRIQ3A6PVS8 624 aaPredicted RBP13.39□□□□□ -0.27
SH3PXD2A-201ENST00000315994 PROSCO94903 275 aa13.39□□□□□ -0.27
SH3PXD2A-201ENST00000315994 LUC7L3O95232 432 aaKnown RBP13.39□□□□□ -0.27
SH3PXD2A-201ENST00000315994 SNHG28P0DPA3 235 aa13.39□□□□□ -0.27
SH3PXD2A-201ENST00000315994 C1QBPQ07021 282 aaKnown RBP13.39□□□□□ -0.27
SH3PXD2A-201ENST00000315994 BST2Q10589 180 aaKnown RBP13.39□□□□□ -0.27
SH3PXD2A-201ENST00000315994 LONRF1Q17RB8 773 aa13.39□□□□□ -0.27
SH3PXD2A-201ENST00000315994 TFDP3Q5H9I0 405 aa13.39□□□□□ -0.27
SH3PXD2A-201ENST00000315994 FAM71DQ8N9W8 422 aa13.39□□□□□ -0.27
SH3PXD2A-201ENST00000315994 BARX2Q9UMQ3 279 aaPredicted RBP13.39□□□□□ -0.27
SH3PXD2A-201ENST00000315994 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.39□□□□□ -0.27
SH3PXD2A-201ENST00000315994 IRF1P10914 325 aa13.39□□□□□ -0.27
SH3PXD2A-201ENST00000315994 MAPK7Q13164 816 aa13.39□□□□□ -0.27
SH3PXD2A-201ENST00000315994 TBX2Q13207 712 aaPredicted RBP13.39□□□□□ -0.27
SH3PXD2A-201ENST00000315994 TMEM132BQ14DG7 1078 aa13.39□□□□□ -0.27
SH3PXD2A-201ENST00000315994 C11orf63Q6NUN7 778 aa13.39□□□□□ -0.27
SH3PXD2A-201ENST00000315994 TRAPPC12Q8WVT3 735 aa13.39□□□□□ -0.27
SH3PXD2A-201ENST00000315994 ATXN8OSP0DMR3 200 aa13.39□□□□□ -0.27
SH3PXD2A-201ENST00000315994 PEX19P40855 299 aa13.39□□□□□ -0.27
SH3PXD2A-201ENST00000315994 MCL1Q07820 350 aa13.39□□□□□ -0.27
SH3PXD2A-201ENST00000315994 HIBCHQ6NVY1 386 aaPredicted RBP13.39□□□□□ -0.27
SH3PXD2A-201ENST00000315994 ARHGEF19Q8IW93 802 aa13.39□□□□□ -0.27
SH3PXD2A-201ENST00000315994 RIBC1Q8N443 379 aaPredicted RBP13.39□□□□□ -0.27
SH3PXD2A-201ENST00000315994 CSDE1O75534 798 aaKnown RBP13.38□□□□□ -0.27
SH3PXD2A-201ENST00000315994 HAUS5O94927 633 aa13.38□□□□□ -0.27
SH3PXD2A-201ENST00000315994 SMAD1Q15797 465 aaKnown RBP13.38□□□□□ -0.27
SH3PXD2A-201ENST00000315994 IL17AQ16552 155 aa13.38□□□□□ -0.27
SH3PXD2A-201ENST00000315994 MEI1Q5TIA1 1274 aa13.38□□□□□ -0.27
SH3PXD2A-201ENST00000315994 ULK4Q96C45 1275 aa13.38□□□□□ -0.27
SH3PXD2A-201ENST00000315994 TRIM54Q9BYV2 358 aa13.38□□□□□ -0.27
SH3PXD2A-201ENST00000315994 KRT82Q9NSB4 513 aa13.38□□□□□ -0.27
SH3PXD2A-201ENST00000315994 NDFIP2Q9NV92 336 aa13.38□□□□□ -0.27
SH3PXD2A-201ENST00000315994 CHMP2BQ9UQN3 213 aa13.38□□□□□ -0.27
SH3PXD2A-201ENST00000315994 CACNA1FO60840 1977 aa13.38□□□□□ -0.27
SH3PXD2A-201ENST00000315994 EGFRP00533 1210 aa13.38□□□□□ -0.27
SH3PXD2A-201ENST00000315994 POLBP06746 335 aa13.38□□□□□ -0.27
SH3PXD2A-201ENST00000315994 EPHB2P29323 1055 aa13.38□□□□□ -0.27
SH3PXD2A-201ENST00000315994 FDFT1P37268 417 aa13.38□□□□□ -0.27
SH3PXD2A-201ENST00000315994 FSCN1Q16658 493 aaKnown RBP13.38□□□□□ -0.27
SH3PXD2A-201ENST00000315994 ETNPPLQ8TBG4 499 aa13.38□□□□□ -0.27
SH3PXD2A-201ENST00000315994 HNRNPLLQ8WVV9 542 aaKnown RBP13.38□□□□□ -0.27
SH3PXD2A-201ENST00000315994 ACSF2Q96CM8 615 aaPredicted RBP13.38□□□□□ -0.27
SH3PXD2A-201ENST00000315994 KLRG1Q96E93 195 aa13.38□□□□□ -0.27
SH3PXD2A-201ENST00000315994 TSPAN17Q96FV3 270 aa13.38□□□□□ -0.27
SH3PXD2A-201ENST00000315994 LRRC37BQ96QE4 947 aa13.38□□□□□ -0.27
SH3PXD2A-201ENST00000315994 EGFL8Q99944 293 aa13.38□□□□□ -0.27
SH3PXD2A-201ENST00000315994 TRIM15Q9C019 465 aa13.38□□□□□ -0.27
SH3PXD2A-201ENST00000315994 LACRTQ9GZZ8 138 aa13.38□□□□□ -0.27
SH3PXD2A-201ENST00000315994 ZCCHC17Q9NP64 241 aaKnown RBP13.38□□□□□ -0.27
SH3PXD2A-201ENST00000315994 XPNPEP3Q9NQH7 507 aa13.38□□□□□ -0.27
SH3PXD2A-201ENST00000315994 TOPAZ1Q8N9V7 1692 aa13.38□□□□□ -0.27
SH3PXD2A-201ENST00000315994 GNGT2O14610 69 aa13.38□□□□□ -0.27
SH3PXD2A-201ENST00000315994 ST8SIA6P61647 398 aa13.38□□□□□ -0.27
SH3PXD2A-201ENST00000315994 FKBP1BP68106 108 aa13.38□□□□□ -0.27
SH3PXD2A-201ENST00000315994 TMTC4Q5T4D3 741 aa13.38□□□□□ -0.27
SH3PXD2A-201ENST00000315994 CDC26Q8NHZ8 85 aa13.38□□□□□ -0.27
SH3PXD2A-201ENST00000315994 ATXN7L3BQ96GX2 97 aa13.38□□□□□ -0.27
SH3PXD2A-201ENST00000315994 TINF2Q9BSI4 451 aa13.38□□□□□ -0.27
SH3PXD2A-201ENST00000315994 CNPY3Q9BT09 278 aa13.38□□□□□ -0.27
SH3PXD2A-201ENST00000315994 KANSL3Q9P2N6 904 aa13.38□□□□□ -0.27
SH3PXD2A-201ENST00000315994 ANGPTL2Q9UKU9 493 aa13.38□□□□□ -0.27
SH3PXD2A-201ENST00000315994 C2CD6Q53TS8 623 aa13.38□□□□□ -0.27
SH3PXD2A-201ENST00000315994 NAPEPLDQ6IQ20 393 aa13.38□□□□□ -0.27
SH3PXD2A-201ENST00000315994 TTC23LQ6PF05 361 aa13.38□□□□□ -0.27
SH3PXD2A-201ENST00000315994 FAM172AQ8WUF8 416 aa13.38□□□□□ -0.27
SH3PXD2A-201ENST00000315994 GBP5Q96PP8 586 aa13.38□□□□□ -0.27
SH3PXD2A-201ENST00000315994 SLC15A5A6NIM6 579 aa13.38□□□□□ -0.27
SH3PXD2A-201ENST00000315994 GYG2O15488 501 aa13.38□□□□□ -0.27
SH3PXD2A-201ENST00000315994 OPHN1O60890 802 aa13.38□□□□□ -0.27
SH3PXD2A-201ENST00000315994 MDH1P40925 334 aaKnown RBP13.38□□□□□ -0.27
SH3PXD2A-201ENST00000315994 RNF135Q8IUD6 432 aa13.38□□□□□ -0.27
SH3PXD2A-201ENST00000315994 EXD1Q8NHP7 514 aa13.38□□□□□ -0.27
SH3PXD2A-201ENST00000315994 PTPRN2Q92932 1015 aa13.38□□□□□ -0.27
SH3PXD2A-201ENST00000315994 EML4Q9HC35 981 aaKnown RBP13.38□□□□□ -0.27
SH3PXD2A-201ENST00000315994 OSGEPQ9NPF4 335 aa13.38□□□□□ -0.27
SH3PXD2A-201ENST00000315994 LRRC10BA6NIK2 292 aa13.37□□□□□ -0.27
SH3PXD2A-201ENST00000315994 SLURP2P0DP57 97 aa13.37□□□□□ -0.27
SH3PXD2A-201ENST00000315994 GTF2BQ00403 316 aa13.37□□□□□ -0.27
SH3PXD2A-201ENST00000315994 DDX42Q86XP3 938 aaKnown RBP eCLIP13.37□□□□□ -0.27
SH3PXD2A-201ENST00000315994 SHCBP1Q8NEM2 672 aa13.37□□□□□ -0.27
SH3PXD2A-201ENST00000315994 CALML6Q8TD86 181 aa13.37□□□□□ -0.27
SH3PXD2A-201ENST00000315994 DCTN4Q9UJW0 460 aa13.37□□□□□ -0.27
SH3PXD2A-201ENST00000315994 ANKRD63C9JTQ0 380 aa13.37□□□□□ -0.27
SH3PXD2A-201ENST00000315994 KLRC4O43908 158 aa13.37□□□□□ -0.27
SH3PXD2A-201ENST00000315994 LRG1P02750 347 aa13.37□□□□□ -0.27
SH3PXD2A-201ENST00000315994 C3orf62Q6ZUJ4 267 aa13.37□□□□□ -0.27
SH3PXD2A-201ENST00000315994 SLFN11Q7Z7L1 901 aa13.37□□□□□ -0.27
SH3PXD2A-201ENST00000315994 LINC00523Q86TU6 105 aa13.37□□□□□ -0.27
SH3PXD2A-201ENST00000315994 MCOLN2Q8IZK6 566 aa13.37□□□□□ -0.27
SH3PXD2A-201ENST00000315994 L3MBTL3Q96JM7 780 aaPredicted RBP13.37□□□□□ -0.27
SH3PXD2A-201ENST00000315994 UPF3AQ9H1J1 476 aaKnown RBP13.37□□□□□ -0.27
SH3PXD2A-201ENST00000315994 IMPG1Q17R60 797 aa13.37□□□□□ -0.27
SH3PXD2A-201ENST00000315994 CTXN3Q4LDR2 81 aa13.37□□□□□ -0.27
SH3PXD2A-201ENST00000315994 XAB2Q9HCS7 855 aaKnown RBP13.37□□□□□ -0.27
SH3PXD2A-201ENST00000315994 ARHGEF38Q9NXL2 777 aa13.37□□□□□ -0.27
SH3PXD2A-201ENST00000315994 TRPV2Q9Y5S1 764 aa13.37□□□□□ -0.27
SH3PXD2A-201ENST00000315994 YDJCA8MPS7 323 aa13.37□□□□□ -0.27
SH3PXD2A-201ENST00000315994 SPATA31C2B4DYI2 1134 aa13.37□□□□□ -0.27
SH3PXD2A-201ENST00000315994 KIF3CO14782 793 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms