RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 RFC1P35251 1148 aaPredicted RBP8.03□□□□□ -1.12
TRIM55-202ENST00000315962 NDST1P52848 882 aa8.03□□□□□ -1.12
TRIM55-202ENST00000315962 CUL1Q13616 776 aa8.03□□□□□ -1.12
TRIM55-202ENST00000315962 CDO1Q16878 200 aa8.03□□□□□ -1.12
TRIM55-202ENST00000315962 SYCP2LQ5T4T6 812 aa8.03□□□□□ -1.12
TRIM55-202ENST00000315962 TWF2Q6IBS0 349 aaKnown RBP8.03□□□□□ -1.12
TRIM55-202ENST00000315962 ENOSF1Q7L5Y1 443 aa8.03□□□□□ -1.12
TRIM55-202ENST00000315962 CCDC33Q8N5R6 958 aa8.03□□□□□ -1.12
TRIM55-202ENST00000315962 PRELID2Q8N945 189 aa8.03□□□□□ -1.12
TRIM55-202ENST00000315962 MRRFQ96E11 262 aaKnown RBP8.03□□□□□ -1.12
TRIM55-202ENST00000315962 SGSM3Q96HU1 749 aa8.03□□□□□ -1.12
TRIM55-202ENST00000315962 ADAMTS10Q9H324 1103 aa8.03□□□□□ -1.12
TRIM55-202ENST00000315962 EPB41L4BQ9H329 900 aa8.03□□□□□ -1.12
TRIM55-202ENST00000315962 CHST7Q9NS84 486 aa8.03□□□□□ -1.12
TRIM55-202ENST00000315962 RNF14Q9UBS8 474 aa8.03□□□□□ -1.12
TRIM55-202ENST00000315962 R3HDM2Q9Y2K5 976 aaKnown RBP8.03□□□□□ -1.12
TRIM55-202ENST00000315962 SLC45A1Q9Y2W3 748 aa8.03□□□□□ -1.12
TRIM55-202ENST00000315962 TIMM13Q9Y5L4 95 aaPredicted RBP8.03□□□□□ -1.12
TRIM55-202ENST00000315962 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.03□□□□□ -1.12
TRIM55-202ENST00000315962 LOC285556D6RIA3 1793 aa8.03□□□□□ -1.12
TRIM55-202ENST00000315962 RBM47A0AV96 593 aaKnown RBP8.02□□□□□ -1.12
TRIM55-202ENST00000315962 B4GALT4O60513 344 aa8.02□□□□□ -1.12
TRIM55-202ENST00000315962 F2P00734 622 aa8.02□□□□□ -1.12
TRIM55-202ENST00000315962 CYP1A1P04798 512 aaPredicted RBP8.02□□□□□ -1.12
TRIM55-202ENST00000315962 RARBP10826 455 aa8.02□□□□□ -1.12
TRIM55-202ENST00000315962 RALAP11233 206 aa8.02□□□□□ -1.12
TRIM55-202ENST00000315962 LMO2P25791 158 aa8.02□□□□□ -1.12
TRIM55-202ENST00000315962 GBP2P32456 591 aaPredicted RBP8.02□□□□□ -1.12
TRIM55-202ENST00000315962 RAD23BP54727 409 aa8.02□□□□□ -1.12
TRIM55-202ENST00000315962 HP1BP3Q5SSJ5 553 aaPredicted RBP8.02□□□□□ -1.12
TRIM55-202ENST00000315962 ERICH1Q86X53 443 aa8.02□□□□□ -1.12
TRIM55-202ENST00000315962 LINC01465Q8N7H1 131 aa8.02□□□□□ -1.12
TRIM55-202ENST00000315962 ARRDC4Q8NCT1 418 aa8.02□□□□□ -1.12
TRIM55-202ENST00000315962 JOSD2Q8TAC2 188 aa8.02□□□□□ -1.12
TRIM55-202ENST00000315962 GTF3C2Q8WUA4 911 aaPredicted RBP8.02□□□□□ -1.12
TRIM55-202ENST00000315962 CCT6BQ92526 530 aa8.02□□□□□ -1.12
TRIM55-202ENST00000315962 CHMP6Q96FZ7 201 aa8.02□□□□□ -1.12
TRIM55-202ENST00000315962 MRPL45Q9BRJ2 306 aaKnown RBP8.02□□□□□ -1.12
TRIM55-202ENST00000315962 B3GNT5Q9BYG0 378 aa8.02□□□□□ -1.12
TRIM55-202ENST00000315962 MIS12Q9H081 205 aa8.02□□□□□ -1.12
TRIM55-202ENST00000315962 DPEP3Q9H4B8 488 aa8.02□□□□□ -1.12
TRIM55-202ENST00000315962 ZFYVE28Q9HCC9 887 aa8.02□□□□□ -1.12
TRIM55-202ENST00000315962 FGFR1OP2Q9NVK5 253 aa8.02□□□□□ -1.12
TRIM55-202ENST00000315962 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.02□□□□□ -1.12
TRIM55-202ENST00000315962 MCM8Q9UJA3 840 aa8.02□□□□□ -1.12
TRIM55-202ENST00000315962 A0A0G2JMZ2 1700 aa8.02□□□□□ -1.13
TRIM55-202ENST00000315962 C5orf42Q9H799 3197 aa8.02□□□□□ -1.13
TRIM55-202ENST00000315962 MANSC4A6NHS7 340 aaPredicted RBP8.02□□□□□ -1.13
TRIM55-202ENST00000315962 FAM155AB1AL88 458 aaPredicted RBP8.02□□□□□ -1.13
TRIM55-202ENST00000315962 M0QYV0 167 aa8.02□□□□□ -1.13
TRIM55-202ENST00000315962 KIAA0391O15091 583 aaKnown RBP8.02□□□□□ -1.13
TRIM55-202ENST00000315962 RGS16O15492 202 aaPredicted RBP8.02□□□□□ -1.13
TRIM55-202ENST00000315962 NEBLO76041 1014 aa8.02□□□□□ -1.13
TRIM55-202ENST00000315962 ANXA13P27216 316 aa8.02□□□□□ -1.13
TRIM55-202ENST00000315962 CCND3P30281 292 aaPredicted RBP8.02□□□□□ -1.13
TRIM55-202ENST00000315962 PEX19P40855 299 aa8.02□□□□□ -1.13
TRIM55-202ENST00000315962 RPL21P46778 160 aaKnown RBP8.02□□□□□ -1.13
TRIM55-202ENST00000315962 PSEN2P49810 448 aa8.02□□□□□ -1.13
TRIM55-202ENST00000315962 PMS2P54278 862 aa8.02□□□□□ -1.13
TRIM55-202ENST00000315962 BPIFB4P59827 614 aa8.02□□□□□ -1.13
TRIM55-202ENST00000315962 CENPCQ03188 943 aa8.02□□□□□ -1.13
TRIM55-202ENST00000315962 SNX17Q15036 470 aa8.02□□□□□ -1.13
TRIM55-202ENST00000315962 NBPF20Q3BBV1 942 aa8.02□□□□□ -1.13
TRIM55-202ENST00000315962 PTPN20Q4JDL3 420 aa8.02□□□□□ -1.13
TRIM55-202ENST00000315962 DENND2CQ68D51 928 aa8.02□□□□□ -1.13
TRIM55-202ENST00000315962 CCDC137Q6PK04 289 aaKnown RBP8.02□□□□□ -1.13
TRIM55-202ENST00000315962 CAPN12Q6ZSI9 719 aa8.02□□□□□ -1.13
TRIM55-202ENST00000315962 ZNF467Q7Z7K2 595 aaPredicted RBP8.02□□□□□ -1.13
TRIM55-202ENST00000315962 JAMLQ86YT9 394 aa8.02□□□□□ -1.13
TRIM55-202ENST00000315962 FMNL3Q8IVF7 1028 aa8.02□□□□□ -1.13
TRIM55-202ENST00000315962 SCUBE3Q8IX30 993 aa8.02□□□□□ -1.13
TRIM55-202ENST00000315962 EXOC8Q8IYI6 725 aa8.02□□□□□ -1.13
TRIM55-202ENST00000315962 OR6B3Q8NGW1 331 aa8.02□□□□□ -1.13
TRIM55-202ENST00000315962 CCDC26Q8TAB7 109 aa8.02□□□□□ -1.13
TRIM55-202ENST00000315962 HASPINQ8TF76 798 aa8.02□□□□□ -1.13
TRIM55-202ENST00000315962 DYDC1Q8WWB3 177 aa8.02□□□□□ -1.13
TRIM55-202ENST00000315962 NDRG1Q92597 394 aaKnown RBP8.02□□□□□ -1.13
TRIM55-202ENST00000315962 RUBCNQ92622 972 aa8.02□□□□□ -1.13
TRIM55-202ENST00000315962 GCOM2Q9BZD3 368 aaPredicted RBP8.02□□□□□ -1.13
TRIM55-202ENST00000315962 ADAM7Q9H2U9 754 aa8.02□□□□□ -1.13
TRIM55-202ENST00000315962 NOD2Q9HC29 1040 aa8.02□□□□□ -1.13
TRIM55-202ENST00000315962 INTS9Q9NV88 658 aaKnown RBP8.02□□□□□ -1.13
TRIM55-202ENST00000315962 DAAM1Q9Y4D1 1078 aa8.02□□□□□ -1.13
TRIM55-202ENST00000315962 NRCAMQ92823 1304 aa8.02□□□□□ -1.13
TRIM55-202ENST00000315962 UBOX5O94941 541 aa8.02□□□□□ -1.13
TRIM55-202ENST00000315962 ACAT1P24752 427 aaKnown RBP8.02□□□□□ -1.13
TRIM55-202ENST00000315962 ABCD1P33897 745 aa8.02□□□□□ -1.13
TRIM55-202ENST00000315962 RGS2P41220 211 aa8.02□□□□□ -1.13
TRIM55-202ENST00000315962 YARSP54577 528 aaKnown RBP8.02□□□□□ -1.13
TRIM55-202ENST00000315962 NRLP54845 237 aa8.02□□□□□ -1.13
TRIM55-202ENST00000315962 RWDD2BP57060 319 aa8.02□□□□□ -1.13
TRIM55-202ENST00000315962 ELF3P78545 371 aaPredicted RBP8.02□□□□□ -1.13
TRIM55-202ENST00000315962 ATP11AP98196 1134 aa8.02□□□□□ -1.13
TRIM55-202ENST00000315962 RNASELQ05823 741 aaKnown RBP8.02□□□□□ -1.13
TRIM55-202ENST00000315962 ZNF252P-AS1Q0IIN9 211 aa8.02□□□□□ -1.13
TRIM55-202ENST00000315962 PREPLQ4J6C6 727 aaPredicted RBP8.02□□□□□ -1.13
TRIM55-202ENST00000315962 SLC4A11Q8NBS3 891 aa8.02□□□□□ -1.13
TRIM55-202ENST00000315962 CCDC197Q8NCU1 140 aa8.02□□□□□ -1.13
TRIM55-202ENST00000315962 CD101Q93033 1021 aa8.02□□□□□ -1.13
TRIM55-202ENST00000315962 EMID1Q96A84 441 aaPredicted RBP8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms