RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 POPDC2Q9HBU9 364 aa8.29□□□□□ -1.08
CNOT4-201ENST00000315544 TRIM33Q9UPN9 1127 aa8.29□□□□□ -1.08
CNOT4-201ENST00000315544 EYSQ5T1H1 3165 aa8.29□□□□□ -1.08
CNOT4-201ENST00000315544 H3BNX3 289 aa8.28□□□□□ -1.08
CNOT4-201ENST00000315544 ADAMTS4O75173 837 aa8.28□□□□□ -1.08
CNOT4-201ENST00000315544 CAPN15O75808 1086 aa8.28□□□□□ -1.08
CNOT4-201ENST00000315544 CLTAP09496 248 aa8.28□□□□□ -1.08
CNOT4-201ENST00000315544 GPD2P43304 727 aa8.28□□□□□ -1.08
CNOT4-201ENST00000315544 KCNJ1P48048 391 aa8.28□□□□□ -1.08
CNOT4-201ENST00000315544 RAD23BP54727 409 aa8.28□□□□□ -1.08
CNOT4-201ENST00000315544 TNK2Q07912 1038 aa8.28□□□□□ -1.08
CNOT4-201ENST00000315544 NSUN2Q08J23 767 aaKnown RBP eCLIP8.28□□□□□ -1.08
CNOT4-201ENST00000315544 STXBP5Q5T5C0 1151 aa8.28□□□□□ -1.08
CNOT4-201ENST00000315544 B4GALNT4Q76KP1 1039 aa8.28□□□□□ -1.08
CNOT4-201ENST00000315544 PEX26Q7Z412 305 aa8.28□□□□□ -1.08
CNOT4-201ENST00000315544 SPICE1Q8N0Z3 855 aa8.28□□□□□ -1.08
CNOT4-201ENST00000315544 SLAIN1Q8ND83 568 aa8.28□□□□□ -1.08
CNOT4-201ENST00000315544 U2AF1L4Q8WU68 220 aaKnown RBP8.28□□□□□ -1.08
CNOT4-201ENST00000315544 AFG1LQ8WV93 481 aa8.28□□□□□ -1.08
CNOT4-201ENST00000315544 ATG4AQ8WYN0 398 aa8.28□□□□□ -1.08
CNOT4-201ENST00000315544 SORT1Q99523 831 aa8.28□□□□□ -1.08
CNOT4-201ENST00000315544 SEZ6LQ9BYH1 1024 aa8.28□□□□□ -1.08
CNOT4-201ENST00000315544 TBC1D22BQ9NU19 505 aa8.28□□□□□ -1.08
CNOT4-201ENST00000315544 CLDN3O15551 220 aa8.28□□□□□ -1.08
CNOT4-201ENST00000315544 STAM2O75886 525 aa8.28□□□□□ -1.08
CNOT4-201ENST00000315544 DGKIO75912 1065 aa8.28□□□□□ -1.08
CNOT4-201ENST00000315544 CD48P09326 243 aa8.28□□□□□ -1.08
CNOT4-201ENST00000315544 GCLMP48507 274 aa8.28□□□□□ -1.08
CNOT4-201ENST00000315544 ITGA8P53708 1063 aa8.28□□□□□ -1.08
CNOT4-201ENST00000315544 PSMC5P62195 406 aa8.28□□□□□ -1.08
CNOT4-201ENST00000315544 ITGA7Q13683 1181 aa8.28□□□□□ -1.08
CNOT4-201ENST00000315544 Q3C1V9 767 aa8.28□□□□□ -1.08
CNOT4-201ENST00000315544 PRAMEF18Q5VWM3 479 aa8.28□□□□□ -1.08
CNOT4-201ENST00000315544 TRAF7Q6Q0C0 670 aa8.28□□□□□ -1.08
CNOT4-201ENST00000315544 SOCS4Q8WXH5 440 aa8.28□□□□□ -1.08
CNOT4-201ENST00000315544 CABS1Q96KC9 395 aa8.28□□□□□ -1.08
CNOT4-201ENST00000315544 RUNDC3BQ96NL0 473 aa8.28□□□□□ -1.08
CNOT4-201ENST00000315544 KIF9Q9HAQ2 790 aa8.28□□□□□ -1.08
CNOT4-201ENST00000315544 AMFRQ9UKV5 643 aa8.28□□□□□ -1.08
CNOT4-201ENST00000315544 CCL15-CCL14A0A0B4J2E2 113 aa8.28□□□□□ -1.08
CNOT4-201ENST00000315544 VGLL3A8MV65 326 aa8.28□□□□□ -1.08
CNOT4-201ENST00000315544 GCOM1H8Y6P7 765 aaPredicted RBP8.28□□□□□ -1.08
CNOT4-201ENST00000315544 POLR2MP0CAP2 368 aa8.28□□□□□ -1.08
CNOT4-201ENST00000315544 NQO1P15559 274 aaKnown RBP8.28□□□□□ -1.08
CNOT4-201ENST00000315544 LBX1P52954 281 aa8.28□□□□□ -1.08
CNOT4-201ENST00000315544 SLC10A2Q12908 348 aaPredicted RBP8.28□□□□□ -1.08
CNOT4-201ENST00000315544 CCL15Q16663 113 aa8.28□□□□□ -1.08
CNOT4-201ENST00000315544 TTC31Q49AM3 519 aaPredicted RBP8.28□□□□□ -1.08
CNOT4-201ENST00000315544 C6orf118Q5T5N4 469 aa8.28□□□□□ -1.08
CNOT4-201ENST00000315544 ANO7Q6IWH7 933 aa8.28□□□□□ -1.08
CNOT4-201ENST00000315544 HOOK3Q86VS8 718 aa8.28□□□□□ -1.08
CNOT4-201ENST00000315544 KLHL7Q8IXQ5 586 aa8.28□□□□□ -1.08
CNOT4-201ENST00000315544 RIBC1Q8N443 379 aaPredicted RBP8.28□□□□□ -1.08
CNOT4-201ENST00000315544 SLC4A11Q8NBS3 891 aa8.28□□□□□ -1.08
CNOT4-201ENST00000315544 BBXQ8WY36 941 aaPredicted RBP8.28□□□□□ -1.08
CNOT4-201ENST00000315544 INPP5DQ92835 1189 aa8.28□□□□□ -1.08
CNOT4-201ENST00000315544 LRRC45Q96CN5 670 aa8.28□□□□□ -1.08
CNOT4-201ENST00000315544 UIMC1Q96RL1 719 aa8.28□□□□□ -1.08
CNOT4-201ENST00000315544 IWS1Q96ST2 819 aa8.28□□□□□ -1.08
CNOT4-201ENST00000315544 CGRRF1Q99675 332 aa8.28□□□□□ -1.08
CNOT4-201ENST00000315544 UBE2TQ9NPD8 197 aaPredicted RBP8.28□□□□□ -1.08
CNOT4-201ENST00000315544 CYP26B1Q9NR63 512 aa8.28□□□□□ -1.08
CNOT4-201ENST00000315544 HMGXB4Q9UGU5 601 aa8.28□□□□□ -1.08
CNOT4-201ENST00000315544 DNPEPQ9ULA0 475 aa8.28□□□□□ -1.08
CNOT4-201ENST00000315544 A0A1W2PPM1 405 aa8.27□□□□□ -1.08
CNOT4-201ENST00000315544 C2CD2LO14523 706 aa8.27□□□□□ -1.08
CNOT4-201ENST00000315544 HSF2BPO75031 334 aa8.27□□□□□ -1.08
CNOT4-201ENST00000315544 LSM8O95777 96 aaKnown RBP8.27□□□□□ -1.08
CNOT4-201ENST00000315544 SFNP31947 248 aa8.27□□□□□ -1.08
CNOT4-201ENST00000315544 NF2P35240 595 aa8.27□□□□□ -1.08
CNOT4-201ENST00000315544 CFAP58Q5T655 872 aa8.27□□□□□ -1.08
CNOT4-201ENST00000315544 ABHD8Q96I13 439 aa8.27□□□□□ -1.08
CNOT4-201ENST00000315544 SERAC1Q96JX3 654 aa8.27□□□□□ -1.08
CNOT4-201ENST00000315544 ACCSQ96QU6 501 aa8.27□□□□□ -1.08
CNOT4-201ENST00000315544 ACO2Q99798 780 aaKnown RBP8.27□□□□□ -1.08
CNOT4-201ENST00000315544 FOXP3Q9BZS1 431 aa8.27□□□□□ -1.08
CNOT4-201ENST00000315544 ARHGAP39Q9C0H5 1083 aa8.27□□□□□ -1.08
CNOT4-201ENST00000315544 MINDY3Q9H8M7 445 aa8.27□□□□□ -1.08
CNOT4-201ENST00000315544 ANLNQ9NQW6 1124 aa8.27□□□□□ -1.08
CNOT4-201ENST00000315544 PHF24Q9UPV7 400 aa8.27□□□□□ -1.08
CNOT4-201ENST00000315544 SNX24Q9Y343 169 aa8.27□□□□□ -1.08
CNOT4-201ENST00000315544 PCDHB2Q9Y5E7 798 aa8.27□□□□□ -1.08
CNOT4-201ENST00000315544 CHD7Q9P2D1 2997 aa8.27□□□□□ -1.08
CNOT4-201ENST00000315544 SPDYE3A6NKU9 549 aa8.27□□□□□ -1.09
CNOT4-201ENST00000315544 RPL13P26373 211 aaKnown RBP8.27□□□□□ -1.09
CNOT4-201ENST00000315544 TNFSF9P41273 254 aa8.27□□□□□ -1.09
CNOT4-201ENST00000315544 SLC8A3P57103 927 aa8.27□□□□□ -1.09
CNOT4-201ENST00000315544 MBTD1Q05BQ5 628 aa8.27□□□□□ -1.09
CNOT4-201ENST00000315544 BLMHQ13867 455 aa8.27□□□□□ -1.09
CNOT4-201ENST00000315544 TSR1Q2NL82 804 aaKnown RBP8.27□□□□□ -1.09
CNOT4-201ENST00000315544 PTPN20Q4JDL3 420 aa8.27□□□□□ -1.09
CNOT4-201ENST00000315544 CD300LGQ6UXG3 332 aa8.27□□□□□ -1.09
CNOT4-201ENST00000315544 MAATS1Q7Z4T9 603 aa8.27□□□□□ -1.09
CNOT4-201ENST00000315544 FBXL13Q8NEE6 735 aa8.27□□□□□ -1.09
CNOT4-201ENST00000315544 MROH8Q9H579 483 aa8.27□□□□□ -1.09
CNOT4-201ENST00000315544 MYZAPP0CAP1 466 aa8.27□□□□□ -1.09
CNOT4-201ENST00000315544 EIF4BP23588 611 aaKnown RBP8.27□□□□□ -1.09
CNOT4-201ENST00000315544 MAPK4P31152 587 aa8.27□□□□□ -1.09
CNOT4-201ENST00000315544 KRT17Q04695 432 aa8.27□□□□□ -1.09
CNOT4-201ENST00000315544 ZRSR1Q15695 479 aaKnown RBP8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms