RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 KIRREL3Q8IZU9 778 aa14.35□□□□□ -0.11
SPAST-201ENST00000315285 TFB1MQ8WVM0 346 aaKnown RBP14.35□□□□□ -0.11
SPAST-201ENST00000315285 PBXIP1Q96AQ6 731 aa14.35□□□□□ -0.11
SPAST-201ENST00000315285 PABPC5Q96DU9 382 aaKnown RBP14.35□□□□□ -0.11
SPAST-201ENST00000315285 NDFIP2Q9NV92 336 aa14.35□□□□□ -0.11
SPAST-201ENST00000315285 WDR70Q9NW82 654 aa14.35□□□□□ -0.11
SPAST-201ENST00000315285 HEY2Q9UBP5 337 aa14.35□□□□□ -0.11
SPAST-201ENST00000315285 FRMPD4Q14CM0 1322 aa14.35□□□□□ -0.11
SPAST-201ENST00000315285 CTSHP09668 335 aa14.35□□□□□ -0.11
SPAST-201ENST00000315285 KCNA3P22001 575 aa14.35□□□□□ -0.11
SPAST-201ENST00000315285 SLC12A3P55017 1021 aa14.35□□□□□ -0.11
SPAST-201ENST00000315285 SNAPC2Q13487 334 aa14.35□□□□□ -0.11
SPAST-201ENST00000315285 LAMC2Q13753 1193 aa14.35□□□□□ -0.11
SPAST-201ENST00000315285 RBBP7Q16576 425 aa14.35□□□□□ -0.11
SPAST-201ENST00000315285 MFSD14CQ5VZR4 134 aa14.35□□□□□ -0.11
SPAST-201ENST00000315285 ASIC4Q96FT7 647 aa14.35□□□□□ -0.11
SPAST-201ENST00000315285 CXorf56Q9H5V9 222 aa14.35□□□□□ -0.11
SPAST-201ENST00000315285 PCDHGC5Q9Y5F6 944 aa14.35□□□□□ -0.11
SPAST-201ENST00000315285 WTIPA6NIX2 430 aaPredicted RBP14.35□□□□□ -0.11
SPAST-201ENST00000315285 O00370 1275 aa14.35□□□□□ -0.11
SPAST-201ENST00000315285 RGL2O15211 777 aa14.35□□□□□ -0.11
SPAST-201ENST00000315285 KIF1CO43896 1103 aaKnown RBP14.35□□□□□ -0.11
SPAST-201ENST00000315285 LSM8O95777 96 aaKnown RBP14.35□□□□□ -0.11
SPAST-201ENST00000315285 VDRP11473 427 aa14.35□□□□□ -0.11
SPAST-201ENST00000315285 NOTUMQ6P988 496 aa14.35□□□□□ -0.11
SPAST-201ENST00000315285 C16orf89Q6UX73 402 aa14.35□□□□□ -0.11
SPAST-201ENST00000315285 CISHQ9NSE2 258 aa14.35□□□□□ -0.11
SPAST-201ENST00000315285 SLC38A7Q9NVC3 462 aa14.35□□□□□ -0.11
SPAST-201ENST00000315285 RIPK2O43353 540 aa14.34□□□□□ -0.11
SPAST-201ENST00000315285 VCAM1P19320 739 aa14.34□□□□□ -0.11
SPAST-201ENST00000315285 PCSK1P29120 753 aa14.34□□□□□ -0.11
SPAST-201ENST00000315285 CYTH1Q15438 398 aa14.34□□□□□ -0.11
SPAST-201ENST00000315285 MCOLN2Q8IZK6 566 aa14.34□□□□□ -0.11
SPAST-201ENST00000315285 ABRAQ8N0Z2 381 aa14.34□□□□□ -0.11
SPAST-201ENST00000315285 PAFAH2Q99487 392 aa14.34□□□□□ -0.11
SPAST-201ENST00000315285 KDM4CQ9H3R0 1056 aa14.34□□□□□ -0.11
SPAST-201ENST00000315285 HAO1Q9UJM8 370 aa14.34□□□□□ -0.11
SPAST-201ENST00000315285 PDE2AO00408 941 aaPredicted RBP14.34□□□□□ -0.11
SPAST-201ENST00000315285 EML1O00423 815 aa14.34□□□□□ -0.11
SPAST-201ENST00000315285 ADCY3O60266 1144 aa14.34□□□□□ -0.11
SPAST-201ENST00000315285 VIL1P09327 827 aaKnown RBP14.34□□□□□ -0.11
SPAST-201ENST00000315285 CLCN3P51790 818 aa14.34□□□□□ -0.11
SPAST-201ENST00000315285 GLIS3Q8NEA6 775 aa14.34□□□□□ -0.11
SPAST-201ENST00000315285 IPMKQ8NFU5 416 aa14.34□□□□□ -0.11
SPAST-201ENST00000315285 SLC5A5Q92911 643 aa14.34□□□□□ -0.11
SPAST-201ENST00000315285 TRAPPC3O43617 180 aa14.34□□□□□ -0.11
SPAST-201ENST00000315285 TLR2O60603 784 aa14.34□□□□□ -0.11
SPAST-201ENST00000315285 FDFT1P37268 417 aa14.34□□□□□ -0.11
SPAST-201ENST00000315285 SOX10P56693 466 aa14.34□□□□□ -0.11
SPAST-201ENST00000315285 MYL6P60660 151 aa14.34□□□□□ -0.11
SPAST-201ENST00000315285 OCA2Q04671 838 aa14.34□□□□□ -0.11
SPAST-201ENST00000315285 KCNA1Q09470 495 aa14.34□□□□□ -0.11
SPAST-201ENST00000315285 CCDC90BQ9GZT6 254 aa14.34□□□□□ -0.11
SPAST-201ENST00000315285 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.34□□□□□ -0.11
SPAST-201ENST00000315285 KIAA1257Q9ULG3 409 aa14.34□□□□□ -0.11
SPAST-201ENST00000315285 TNPO2O14787 897 aaKnown RBP14.34□□□□□ -0.11
SPAST-201ENST00000315285 PYGMP11217 842 aa14.34□□□□□ -0.11
SPAST-201ENST00000315285 RPL21P46778 160 aaKnown RBP14.34□□□□□ -0.11
SPAST-201ENST00000315285 TAF6P49848 677 aa14.34□□□□□ -0.11
SPAST-201ENST00000315285 LBRQ14739 615 aaKnown RBP14.34□□□□□ -0.11
SPAST-201ENST00000315285 MIIPQ5JXC2 388 aa14.34□□□□□ -0.11
SPAST-201ENST00000315285 NAPEPLDQ6IQ20 393 aa14.34□□□□□ -0.11
SPAST-201ENST00000315285 TMEM154Q6P9G4 183 aa14.34□□□□□ -0.11
SPAST-201ENST00000315285 TEX9Q8N6V9 391 aa14.34□□□□□ -0.11
SPAST-201ENST00000315285 TSEN2Q8NCE0 465 aaKnown RBP14.34□□□□□ -0.11
SPAST-201ENST00000315285 KATNAL1Q9BW62 490 aa14.34□□□□□ -0.11
SPAST-201ENST00000315285 SLC39A10Q9ULF5 831 aa14.34□□□□□ -0.11
SPAST-201ENST00000315285 CDYLQ9Y232 598 aa14.34□□□□□ -0.11
SPAST-201ENST00000315285 PNPLA4P41247 253 aa14.33□□□□□ -0.11
SPAST-201ENST00000315285 PDAP1Q13442 181 aaKnown RBP14.33□□□□□ -0.11
SPAST-201ENST00000315285 INPP5AQ14642 412 aa14.33□□□□□ -0.11
SPAST-201ENST00000315285 PDK2Q15119 407 aa14.33□□□□□ -0.11
SPAST-201ENST00000315285 WDR59Q6PJI9 974 aa14.33□□□□□ -0.11
SPAST-201ENST00000315285 WDR49Q8IV35 697 aa14.33□□□□□ -0.11
SPAST-201ENST00000315285 DDX20Q9UHI6 824 aaKnown RBP14.33□□□□□ -0.11
SPAST-201ENST00000315285 RIMS1Q86UR5 1692 aaKnown RBP14.33□□□□□ -0.11
SPAST-201ENST00000315285 NCAM1P13591 858 aa14.33□□□□□ -0.12
SPAST-201ENST00000315285 C1QBPQ07021 282 aaKnown RBP14.33□□□□□ -0.12
SPAST-201ENST00000315285 PCSK7Q16549 785 aa14.33□□□□□ -0.12
SPAST-201ENST00000315285 DAB2IPQ5VWQ8 1189 aa14.33□□□□□ -0.12
SPAST-201ENST00000315285 LRRC55Q6ZSA7 311 aa14.33□□□□□ -0.12
SPAST-201ENST00000315285 ACTL9Q8TC94 416 aa14.33□□□□□ -0.12
SPAST-201ENST00000315285 SLC24A2Q9UI40 661 aa14.33□□□□□ -0.12
SPAST-201ENST00000315285 UBQLN1Q9UMX0 589 aaKnown RBP14.33□□□□□ -0.12
SPAST-201ENST00000315285 C6orf222P0C671 652 aaPredicted RBP14.33□□□□□ -0.12
SPAST-201ENST00000315285 FAM200BP0CF97 657 aa14.33□□□□□ -0.12
SPAST-201ENST00000315285 NBPF20Q3BBV1 942 aa14.33□□□□□ -0.12
SPAST-201ENST00000315285 CALML6Q8TD86 181 aa14.33□□□□□ -0.12
SPAST-201ENST00000315285 EME1Q96AY2 570 aa14.33□□□□□ -0.12
SPAST-201ENST00000315285 SLC4A9Q96Q91 983 aa14.33□□□□□ -0.12
SPAST-201ENST00000315285 LMCD1Q9NZU5 365 aa14.33□□□□□ -0.12
SPAST-201ENST00000315285 NAALADL1Q9UQQ1 740 aa14.33□□□□□ -0.12
SPAST-201ENST00000315285 RPS6KL1Q9Y6S9 549 aa14.33□□□□□ -0.12
SPAST-201ENST00000315285 UBOX5O94941 541 aa14.33□□□□□ -0.12
SPAST-201ENST00000315285 PGM5Q15124 567 aa14.33□□□□□ -0.12
SPAST-201ENST00000315285 TBCCQ15814 346 aa14.33□□□□□ -0.12
SPAST-201ENST00000315285 IL17AQ16552 155 aa14.33□□□□□ -0.12
SPAST-201ENST00000315285 EMC1Q8N766 993 aa14.33□□□□□ -0.12
SPAST-201ENST00000315285 PPP1R2P1Q96PQ5 205 aa14.33□□□□□ -0.12
SPAST-201ENST00000315285 DCLK3Q9C098 648 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms