RNA–Protein interactions for RNA: ENST00000310546.2

SPSB4-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB4, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-201ENST00000310546 ELMO3Q96BJ8 720 aa18.9■□□□□ 0.62
SPSB4-201ENST00000310546 ZDHHC15Q96MV8 337 aa18.9■□□□□ 0.62
SPSB4-201ENST00000310546 FAM111AQ96PZ2 611 aa18.9■□□□□ 0.62
SPSB4-201ENST00000310546 POLR3CQ9BUI4 534 aaPredicted RBP18.9■□□□□ 0.62
SPSB4-201ENST00000310546 KLHL4Q9C0H6 718 aa18.9■□□□□ 0.62
SPSB4-201ENST00000310546 NDUFA13Q9P0J0 144 aa18.9■□□□□ 0.62
SPSB4-201ENST00000310546 FZD1Q9UP38 647 aa18.9■□□□□ 0.62
SPSB4-201ENST00000310546 GJA3Q9Y6H8 435 aa18.9■□□□□ 0.62
SPSB4-201ENST00000310546 SPECC1L-ADORA2AF8WAN1 911 aa18.9■□□□□ 0.62
SPSB4-201ENST00000310546 EML1O00423 815 aa18.9■□□□□ 0.62
SPSB4-201ENST00000310546 CLPTM1O96005 669 aa18.9■□□□□ 0.62
SPSB4-201ENST00000310546 FDX1P10109 184 aa18.9■□□□□ 0.62
SPSB4-201ENST00000310546 RFX1P22670 979 aa18.9■□□□□ 0.62
SPSB4-201ENST00000310546 ARSEP51690 589 aa18.9■□□□□ 0.62
SPSB4-201ENST00000310546 PPP3CAQ08209 521 aa18.9■□□□□ 0.62
SPSB4-201ENST00000310546 ZFYVE27Q5T4F4 411 aa18.9■□□□□ 0.62
SPSB4-201ENST00000310546 LLGL2Q6P1M3 1020 aa18.9■□□□□ 0.62
SPSB4-201ENST00000310546 RMI1Q9H9A7 625 aa18.9■□□□□ 0.62
SPSB4-201ENST00000310546 BTBD7Q9P203 1132 aa18.9■□□□□ 0.62
SPSB4-201ENST00000310546 DNAJB4Q9UDY4 337 aa18.9■□□□□ 0.62
SPSB4-201ENST00000310546 SLC24A2Q9UI40 661 aa18.9■□□□□ 0.62
SPSB4-201ENST00000310546 C15orf38-AP3S2A0A0A6YYH1 394 aa18.89■□□□□ 0.61
SPSB4-201ENST00000310546 USP17L10C9JJH3 530 aa18.89■□□□□ 0.61
SPSB4-201ENST00000310546 E5RJQ4 531 aa18.89■□□□□ 0.61
SPSB4-201ENST00000310546 LPXNO60711 386 aa18.89■□□□□ 0.61
SPSB4-201ENST00000310546 CALCAP01258 141 aa18.89■□□□□ 0.61
SPSB4-201ENST00000310546 HLA-DOAP06340 250 aa18.89■□□□□ 0.61
SPSB4-201ENST00000310546 KITP10721 976 aa18.89■□□□□ 0.61
SPSB4-201ENST00000310546 YY1P25490 414 aa18.89■□□□□ 0.61
SPSB4-201ENST00000310546 PRAMEF18Q5VWM3 479 aa18.89■□□□□ 0.61
SPSB4-201ENST00000310546 SLC30A10Q6XR72 485 aa18.89■□□□□ 0.61
SPSB4-201ENST00000310546 ARPINQ7Z6K5 226 aa18.89■□□□□ 0.61
SPSB4-201ENST00000310546 PRPF39Q86UA1 669 aaKnown RBP18.89■□□□□ 0.61
SPSB4-201ENST00000310546 FAM178BQ8IXR5 827 aa18.89■□□□□ 0.61
SPSB4-201ENST00000310546 GDPD5Q8WTR4 605 aa18.89■□□□□ 0.61
SPSB4-201ENST00000310546 CSRNP1Q96S65 589 aa18.89■□□□□ 0.61
SPSB4-201ENST00000310546 TMEM117Q9H0C3 514 aa18.89■□□□□ 0.61
SPSB4-201ENST00000310546 ADAMTS6Q9UKP5 1117 aa18.89■□□□□ 0.61
SPSB4-201ENST00000310546 PLA2G4CQ9UP65 541 aa18.89■□□□□ 0.61
SPSB4-201ENST00000310546 CD58P19256 250 aa18.89■□□□□ 0.61
SPSB4-201ENST00000310546 SLC1A1P43005 524 aa18.89■□□□□ 0.61
SPSB4-201ENST00000310546 ITGA9Q13797 1035 aa18.89■□□□□ 0.61
SPSB4-201ENST00000310546 TRIP10Q15642 601 aa18.89■□□□□ 0.61
SPSB4-201ENST00000310546 ASPRV1Q53RT3 343 aa18.89■□□□□ 0.61
SPSB4-201ENST00000310546 SH3D19Q5HYK7 790 aa18.89■□□□□ 0.61
SPSB4-201ENST00000310546 RNF111Q6ZNA4 994 aa18.89■□□□□ 0.61
SPSB4-201ENST00000310546 TRIM67Q6ZTA4 783 aa18.89■□□□□ 0.61
SPSB4-201ENST00000310546 ZBTB8BQ8NAP8 495 aaPredicted RBP18.89■□□□□ 0.61
SPSB4-201ENST00000310546 CCDC124Q96CT7 223 aaKnown RBP18.89■□□□□ 0.61
SPSB4-201ENST00000310546 PRICKLE1Q96MT3 831 aaPredicted RBP18.89■□□□□ 0.61
SPSB4-201ENST00000310546 GRIP2Q9C0E4 1043 aa18.89■□□□□ 0.61
SPSB4-201ENST00000310546 TMEM39BQ9GZU3 492 aa18.89■□□□□ 0.61
SPSB4-201ENST00000310546 S100A14Q9HCY8 104 aa18.89■□□□□ 0.61
SPSB4-201ENST00000310546 KLHL11Q9NVR0 708 aa18.89■□□□□ 0.61
SPSB4-201ENST00000310546 PIM2Q9P1W9 311 aa18.89■□□□□ 0.61
SPSB4-201ENST00000310546 MARCOQ9UEW3 520 aaPredicted RBP18.89■□□□□ 0.61
SPSB4-201ENST00000310546 TM9SF1O15321 606 aa18.88■□□□□ 0.61
SPSB4-201ENST00000310546 ALDH18A1P54886 795 aaKnown RBP18.88■□□□□ 0.61
SPSB4-201ENST00000310546 GRAMD1BQ3KR37 738 aa18.88■□□□□ 0.61
SPSB4-201ENST00000310546 EPC2Q52LR7 807 aa18.88■□□□□ 0.61
SPSB4-201ENST00000310546 TMCO4Q5TGY1 634 aa18.88■□□□□ 0.61
SPSB4-201ENST00000310546 PAFAH2Q99487 392 aa18.88■□□□□ 0.61
SPSB4-201ENST00000310546 ANO3Q9BYT9 981 aa18.88■□□□□ 0.61
SPSB4-201ENST00000310546 PARVGQ9HBI0 331 aa18.88■□□□□ 0.61
SPSB4-201ENST00000310546 SH3GLB1Q9Y371 365 aa18.88■□□□□ 0.61
SPSB4-201ENST00000310546 FKBP6O75344 327 aa18.88■□□□□ 0.61
SPSB4-201ENST00000310546 GTF2H1P32780 548 aa18.88■□□□□ 0.61
SPSB4-201ENST00000310546 BTKQ06187 659 aa18.88■□□□□ 0.61
SPSB4-201ENST00000310546 KLF1Q13351 362 aaPredicted RBP18.88■□□□□ 0.61
SPSB4-201ENST00000310546 PRKD1Q15139 912 aaPredicted RBP18.88■□□□□ 0.61
SPSB4-201ENST00000310546 FBXL19Q6PCT2 694 aa18.88■□□□□ 0.61
SPSB4-201ENST00000310546 OGFOD1Q8N543 542 aa18.88■□□□□ 0.61
SPSB4-201ENST00000310546 BANPQ8N9N5 519 aa18.88■□□□□ 0.61
SPSB4-201ENST00000310546 NLGN2Q8NFZ4 835 aa18.88■□□□□ 0.61
SPSB4-201ENST00000310546 HSPBAP1Q96EW2 488 aa18.88■□□□□ 0.61
SPSB4-201ENST00000310546 GCNAQ96QF7 691 aa18.88■□□□□ 0.61
SPSB4-201ENST00000310546 TISP43B9A030 160 aa18.87■□□□□ 0.61
SPSB4-201ENST00000310546 DNALI1O14645 258 aaPredicted RBP18.87■□□□□ 0.61
SPSB4-201ENST00000310546 ATP2A1O14983 1001 aa18.87■□□□□ 0.61
SPSB4-201ENST00000310546 EIF3DO15371 548 aaKnown RBP eCLIP18.87■□□□□ 0.61
SPSB4-201ENST00000310546 IFNB1P01574 187 aa18.87■□□□□ 0.61
SPSB4-201ENST00000310546 EEF2P13639 858 aaKnown RBP18.87■□□□□ 0.61
SPSB4-201ENST00000310546 ADSSP30520 456 aa18.87■□□□□ 0.61
SPSB4-201ENST00000310546 SERPINB6P35237 376 aa18.87■□□□□ 0.61
SPSB4-201ENST00000310546 RPL5P46777 297 aaKnown RBP18.87■□□□□ 0.61
SPSB4-201ENST00000310546 EPHB1P54762 984 aa18.87■□□□□ 0.61
SPSB4-201ENST00000310546 CXCL9Q07325 125 aa18.87■□□□□ 0.61
SPSB4-201ENST00000310546 DCTN2Q13561 401 aaKnown RBP18.87■□□□□ 0.61
SPSB4-201ENST00000310546 NADK2Q4G0N4 442 aa18.87■□□□□ 0.61
SPSB4-201ENST00000310546 CENPUQ71F23 418 aa18.87■□□□□ 0.61
SPSB4-201ENST00000310546 TAB3Q8N5C8 712 aaPredicted RBP18.87■□□□□ 0.61
SPSB4-201ENST00000310546 GAB3Q8WWW8 586 aa18.87■□□□□ 0.61
SPSB4-201ENST00000310546 JDP2Q8WYK2 163 aa18.87■□□□□ 0.61
SPSB4-201ENST00000310546 USP6NLQ92738 828 aa18.87■□□□□ 0.61
SPSB4-201ENST00000310546 SIKE1Q9BRV8 207 aa18.87■□□□□ 0.61
SPSB4-201ENST00000310546 ZDHHC7Q9NXF8 308 aa18.87■□□□□ 0.61
SPSB4-201ENST00000310546 ASTN2O75129 1339 aaPredicted RBP18.87■□□□□ 0.61
SPSB4-201ENST00000310546 CAPN14A8MX76 684 aa18.87■□□□□ 0.61
SPSB4-201ENST00000310546 TFAP2AP05549 437 aa18.87■□□□□ 0.61
SPSB4-201ENST00000310546 CYP11B1P15538 503 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms