RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 CXCL11O14625 94 aa12.14□□□□□ -0.47
PTPN2-201ENST00000309660 DNALI1O14645 258 aaPredicted RBP12.14□□□□□ -0.47
PTPN2-201ENST00000309660 B4GALT4O60513 344 aa12.14□□□□□ -0.47
PTPN2-201ENST00000309660 ARF4P18085 180 aaPredicted RBP12.14□□□□□ -0.47
PTPN2-201ENST00000309660 VCPP55072 806 aaKnown RBP12.14□□□□□ -0.47
PTPN2-201ENST00000309660 GLRA4Q5JXX5 417 aa12.14□□□□□ -0.47
PTPN2-201ENST00000309660 MFSD5Q6N075 450 aa12.14□□□□□ -0.47
PTPN2-201ENST00000309660 HIBCHQ6NVY1 386 aaPredicted RBP12.14□□□□□ -0.47
PTPN2-201ENST00000309660 CCDC62Q6P9F0 684 aa12.14□□□□□ -0.47
PTPN2-201ENST00000309660 VSTM1Q6UX27 236 aa12.14□□□□□ -0.47
PTPN2-201ENST00000309660 TMEM109Q9BVC6 243 aa12.14□□□□□ -0.47
PTPN2-201ENST00000309660 IFT122Q9HBG6 1241 aa12.14□□□□□ -0.47
PTPN2-201ENST00000309660 FAM49BQ9NUQ9 324 aa12.14□□□□□ -0.47
PTPN2-201ENST00000309660 PRMT7Q9NVM4 692 aaPredicted RBP12.14□□□□□ -0.47
PTPN2-201ENST00000309660 CLEC11AQ9Y240 323 aa12.14□□□□□ -0.47
PTPN2-201ENST00000309660 LCTP09848 1927 aa12.14□□□□□ -0.47
PTPN2-201ENST00000309660 IGKV6-21A0A0C4DH24 114 aa12.14□□□□□ -0.47
PTPN2-201ENST00000309660 LGR5O75473 907 aa12.14□□□□□ -0.47
PTPN2-201ENST00000309660 MICAL2O94851 1124 aa12.14□□□□□ -0.47
PTPN2-201ENST00000309660 HNRNPH1P31943 449 aaKnown RBP12.14□□□□□ -0.47
PTPN2-201ENST00000309660 ACTN3Q08043 901 aaPredicted RBP12.14□□□□□ -0.47
PTPN2-201ENST00000309660 AMHR2Q16671 573 aa12.14□□□□□ -0.47
PTPN2-201ENST00000309660 KIZQ2M2Z5 673 aa12.14□□□□□ -0.47
PTPN2-201ENST00000309660 RAB6CQ53S08 254 aa12.14□□□□□ -0.47
PTPN2-201ENST00000309660 EXOC8Q8IYI6 725 aa12.14□□□□□ -0.47
PTPN2-201ENST00000309660 ALLCQ8N6M5 410 aa12.14□□□□□ -0.47
PTPN2-201ENST00000309660 FAM71DQ8N9W8 422 aa12.14□□□□□ -0.47
PTPN2-201ENST00000309660 CENPTQ96BT3 561 aa12.14□□□□□ -0.47
PTPN2-201ENST00000309660 CFAP57Q96MR6 1250 aa12.14□□□□□ -0.47
PTPN2-201ENST00000309660 ZNF518BQ9C0D4 1074 aa12.14□□□□□ -0.47
PTPN2-201ENST00000309660 RAB6CQ9H0N0 254 aa12.14□□□□□ -0.47
PTPN2-201ENST00000309660 PTPRHQ9HD43 1115 aa12.14□□□□□ -0.47
PTPN2-201ENST00000309660 NGRNQ9NPE2 291 aaKnown RBP12.14□□□□□ -0.47
PTPN2-201ENST00000309660 TNFSF13BQ9Y275 285 aa12.14□□□□□ -0.47
PTPN2-201ENST00000309660 SRRM3A6NNA2 597 aaPredicted RBP12.14□□□□□ -0.47
PTPN2-201ENST00000309660 C22orf31O95567 290 aa12.14□□□□□ -0.47
PTPN2-201ENST00000309660 MMRN1Q13201 1228 aa12.14□□□□□ -0.47
PTPN2-201ENST00000309660 TMEM132DQ14C87 1099 aa12.14□□□□□ -0.47
PTPN2-201ENST00000309660 C15orf59Q2T9L4 293 aaPredicted RBP12.14□□□□□ -0.47
PTPN2-201ENST00000309660 BBS9Q3SYG4 887 aa12.14□□□□□ -0.47
PTPN2-201ENST00000309660 ANKRD20A8PQ5CZ79 823 aa12.14□□□□□ -0.47
PTPN2-201ENST00000309660 ZCCHC9Q8N567 271 aaKnown RBP12.14□□□□□ -0.47
PTPN2-201ENST00000309660 SLC4A11Q8NBS3 891 aa12.14□□□□□ -0.47
PTPN2-201ENST00000309660 KIF12Q96FN5 646 aa12.14□□□□□ -0.47
PTPN2-201ENST00000309660 TMEM176AQ96HP8 235 aa12.14□□□□□ -0.47
PTPN2-201ENST00000309660 TGS1Q96RS0 853 aaKnown RBP12.14□□□□□ -0.47
PTPN2-201ENST00000309660 HES2Q9Y543 173 aa12.14□□□□□ -0.47
PTPN2-201ENST00000309660 ITGBL1O95965 494 aaPredicted RBP12.13□□□□□ -0.47
PTPN2-201ENST00000309660 ADORA2AP29274 412 aa12.13□□□□□ -0.47
PTPN2-201ENST00000309660 MIPP30301 263 aa12.13□□□□□ -0.47
PTPN2-201ENST00000309660 CTCFP49711 727 aaPredicted RBP12.13□□□□□ -0.47
PTPN2-201ENST00000309660 NDST1P52848 882 aa12.13□□□□□ -0.47
PTPN2-201ENST00000309660 CCDC33Q8N5R6 958 aa12.13□□□□□ -0.47
PTPN2-201ENST00000309660 ARFGAP1Q8N6T3 406 aa12.13□□□□□ -0.47
PTPN2-201ENST00000309660 C7orf31Q8N865 590 aa12.13□□□□□ -0.47
PTPN2-201ENST00000309660 MAK16Q9BXY0 300 aaKnown RBP12.13□□□□□ -0.47
PTPN2-201ENST00000309660 GPATCH2LQ9NWQ4 482 aa12.13□□□□□ -0.47
PTPN2-201ENST00000309660 DDX56Q9NY93 547 aaKnown RBP12.13□□□□□ -0.47
PTPN2-201ENST00000309660 C5orf60A6NFR6 353 aa12.13□□□□□ -0.47
PTPN2-201ENST00000309660 KRT7P08729 469 aa12.13□□□□□ -0.47
PTPN2-201ENST00000309660 SSTR1P30872 391 aa12.13□□□□□ -0.47
PTPN2-201ENST00000309660 SCTRP47872 440 aa12.13□□□□□ -0.47
PTPN2-201ENST00000309660 CDH6P55285 790 aa12.13□□□□□ -0.47
PTPN2-201ENST00000309660 MYO1EQ12965 1108 aa12.13□□□□□ -0.47
PTPN2-201ENST00000309660 SLC10A6Q3KNW5 377 aa12.13□□□□□ -0.47
PTPN2-201ENST00000309660 C9orf131Q5VYM1 1079 aa12.13□□□□□ -0.47
PTPN2-201ENST00000309660 NPNTQ6UXI9 565 aa12.13□□□□□ -0.47
PTPN2-201ENST00000309660 CENPUQ71F23 418 aa12.13□□□□□ -0.47
PTPN2-201ENST00000309660 FASTKD5Q7L8L6 764 aaKnown RBP12.13□□□□□ -0.47
PTPN2-201ENST00000309660 YTHDF3Q7Z739 585 aaKnown RBP12.13□□□□□ -0.47
PTPN2-201ENST00000309660 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.13□□□□□ -0.47
PTPN2-201ENST00000309660 SLC10A4Q96EP9 437 aa12.13□□□□□ -0.47
PTPN2-201ENST00000309660 PIWIL1Q96J94 861 aaKnown RBP12.13□□□□□ -0.47
PTPN2-201ENST00000309660 ABCF3Q9NUQ8 709 aa12.13□□□□□ -0.47
PTPN2-201ENST00000309660 PCDHGC3Q9UN70 934 aa12.13□□□□□ -0.47
PTPN2-201ENST00000309660 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.13□□□□□ -0.47
PTPN2-201ENST00000309660 SIGLEC16A6NMB1 481 aa12.13□□□□□ -0.47
PTPN2-201ENST00000309660 FSBPO95073 299 aa12.13□□□□□ -0.47
PTPN2-201ENST00000309660 IL18RAPO95256 599 aa12.13□□□□□ -0.47
PTPN2-201ENST00000309660 PROZP22891 400 aa12.13□□□□□ -0.47
PTPN2-201ENST00000309660 TAP1Q03518 808 aa12.13□□□□□ -0.47
PTPN2-201ENST00000309660 GRM1Q13255 1194 aa12.13□□□□□ -0.47
PTPN2-201ENST00000309660 STAT4Q14765 748 aa12.13□□□□□ -0.47
PTPN2-201ENST00000309660 HIF1AQ16665 826 aa12.13□□□□□ -0.47
PTPN2-201ENST00000309660 ANKRD22Q5VYY1 191 aa12.13□□□□□ -0.47
PTPN2-201ENST00000309660 C1orf228Q6PIY5 440 aa12.13□□□□□ -0.47
PTPN2-201ENST00000309660 DPP9Q86TI2 863 aa12.13□□□□□ -0.47
PTPN2-201ENST00000309660 MIS12Q9H081 205 aa12.13□□□□□ -0.47
PTPN2-201ENST00000309660 PDZD7Q9H5P4 517 aa12.13□□□□□ -0.47
PTPN2-201ENST00000309660 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.13□□□□□ -0.47
PTPN2-201ENST00000309660 HEY1Q9Y5J3 304 aa12.13□□□□□ -0.47
PTPN2-201ENST00000309660 SNX9Q9Y5X1 595 aa12.13□□□□□ -0.47
PTPN2-201ENST00000309660 TCRBV5S1A1TA0A578 114 aa12.12□□□□□ -0.47
PTPN2-201ENST00000309660 ASB14A6NK59 587 aa12.12□□□□□ -0.47
PTPN2-201ENST00000309660 CCT8L1PA6NM43 557 aa12.12□□□□□ -0.47
PTPN2-201ENST00000309660 E5RJQ4 531 aa12.12□□□□□ -0.47
PTPN2-201ENST00000309660 GOLGA8RI6L899 631 aa12.12□□□□□ -0.47
PTPN2-201ENST00000309660 RBP3P10745 1247 aa12.12□□□□□ -0.47
PTPN2-201ENST00000309660 PDGFRAP16234 1089 aa12.12□□□□□ -0.47
PTPN2-201ENST00000309660 EIF3EP60228 445 aaKnown RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms