RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 HELQQ8TDG4 1101 aa13.27□□□□□ -0.29
RETREG3-201ENST00000309428 STK32AQ8WU08 396 aa13.27□□□□□ -0.29
RETREG3-201ENST00000309428 SCG3Q8WXD2 468 aaKnown RBP13.27□□□□□ -0.29
RETREG3-201ENST00000309428 DMAC2Q9NW81 257 aa13.27□□□□□ -0.29
RETREG3-201ENST00000309428 CYP39A1Q9NYL5 469 aa13.27□□□□□ -0.29
RETREG3-201ENST00000309428 NKX1-2Q9UD57 310 aaPredicted RBP13.27□□□□□ -0.29
RETREG3-201ENST00000309428 DNPEPQ9ULA0 475 aa13.27□□□□□ -0.29
RETREG3-201ENST00000309428 FAF1Q9UNN5 650 aaPredicted RBP13.27□□□□□ -0.29
RETREG3-201ENST00000309428 ZNF541Q9H0D2 1346 aa13.27□□□□□ -0.29
RETREG3-201ENST00000309428 CREB3O43889 395 aa13.27□□□□□ -0.29
RETREG3-201ENST00000309428 ZNF286BP0CG31 522 aa13.27□□□□□ -0.29
RETREG3-201ENST00000309428 ECHS1P30084 290 aa13.27□□□□□ -0.29
RETREG3-201ENST00000309428 RPA3P35244 121 aaPredicted RBP13.27□□□□□ -0.29
RETREG3-201ENST00000309428 HSD17B4P51659 736 aa13.27□□□□□ -0.29
RETREG3-201ENST00000309428 KCTD2Q14681 263 aa13.27□□□□□ -0.29
RETREG3-201ENST00000309428 MAPK6Q16659 721 aa13.27□□□□□ -0.29
RETREG3-201ENST00000309428 XKR3Q5GH77 459 aa13.27□□□□□ -0.29
RETREG3-201ENST00000309428 DARS2Q6PI48 645 aaKnown RBP13.27□□□□□ -0.29
RETREG3-201ENST00000309428 DCLK2Q8N568 766 aa13.27□□□□□ -0.29
RETREG3-201ENST00000309428 CEP41Q9BYV8 373 aa13.27□□□□□ -0.29
RETREG3-201ENST00000309428 ROPN1BQ9BZX4 212 aaPredicted RBP13.27□□□□□ -0.29
RETREG3-201ENST00000309428 ROPN1Q9HAT0 212 aaPredicted RBP13.27□□□□□ -0.29
RETREG3-201ENST00000309428 APOBEC3GQ9HC16 384 aaKnown RBP13.27□□□□□ -0.29
RETREG3-201ENST00000309428 FBXO6Q9NRD1 293 aaPredicted RBP13.27□□□□□ -0.29
RETREG3-201ENST00000309428 NRBP2Q9NSY0 501 aa13.27□□□□□ -0.29
RETREG3-201ENST00000309428 SEPT10Q9P0V9 454 aa13.27□□□□□ -0.29
RETREG3-201ENST00000309428 H0YGN5 161 aa13.26□□□□□ -0.29
RETREG3-201ENST00000309428 IRF6O14896 467 aa13.26□□□□□ -0.29
RETREG3-201ENST00000309428 CCDC22O60826 627 aa13.26□□□□□ -0.29
RETREG3-201ENST00000309428 UNC5CO95185 931 aa13.26□□□□□ -0.29
RETREG3-201ENST00000309428 PDGFRBP09619 1106 aa13.26□□□□□ -0.29
RETREG3-201ENST00000309428 SERPINB3P29508 390 aa13.26□□□□□ -0.29
RETREG3-201ENST00000309428 VHLP40337 213 aa13.26□□□□□ -0.29
RETREG3-201ENST00000309428 PDE1BQ01064 536 aa13.26□□□□□ -0.29
RETREG3-201ENST00000309428 CUL2Q13617 745 aa13.26□□□□□ -0.29
RETREG3-201ENST00000309428 ZBTB8OSQ8IWT0 167 aa13.26□□□□□ -0.29
RETREG3-201ENST00000309428 FAM71AQ8IYT1 594 aa13.26□□□□□ -0.29
RETREG3-201ENST00000309428 MCOLN2Q8IZK6 566 aa13.26□□□□□ -0.29
RETREG3-201ENST00000309428 ST13P4Q8IZP2 240 aaPredicted RBP13.26□□□□□ -0.29
RETREG3-201ENST00000309428 CYP4X1Q8N118 509 aa13.26□□□□□ -0.29
RETREG3-201ENST00000309428 EFCAB3Q8N7B9 438 aa13.26□□□□□ -0.29
RETREG3-201ENST00000309428 AGBL3Q8NEM8 1001 aa13.26□□□□□ -0.29
RETREG3-201ENST00000309428 LMO3Q8TAP4 145 aa13.26□□□□□ -0.29
RETREG3-201ENST00000309428 FAM149B1Q96BN6 582 aa13.26□□□□□ -0.29
RETREG3-201ENST00000309428 ANGPTL2Q9UKU9 493 aa13.26□□□□□ -0.29
RETREG3-201ENST00000309428 NFS1Q9Y697 457 aa13.26□□□□□ -0.29
RETREG3-201ENST00000309428 GTPBP10A4D1E9 387 aaKnown RBP13.26□□□□□ -0.29
RETREG3-201ENST00000309428 SPECC1L-ADORA2AF8WAN1 911 aa13.26□□□□□ -0.29
RETREG3-201ENST00000309428 NFKBIEO00221 500 aa13.26□□□□□ -0.29
RETREG3-201ENST00000309428 PRKCBP05771 671 aa13.26□□□□□ -0.29
RETREG3-201ENST00000309428 TXNP10599 105 aaKnown RBP13.26□□□□□ -0.29
RETREG3-201ENST00000309428 GTF2BQ00403 316 aa13.26□□□□□ -0.29
RETREG3-201ENST00000309428 GAD2Q05329 585 aa13.26□□□□□ -0.29
RETREG3-201ENST00000309428 HIF1AQ16665 826 aa13.26□□□□□ -0.29
RETREG3-201ENST00000309428 LRRC6Q86X45 466 aa13.26□□□□□ -0.29
RETREG3-201ENST00000309428 KCTD6Q8NC69 237 aa13.26□□□□□ -0.29
RETREG3-201ENST00000309428 B4GALNT2Q8NHY0 566 aa13.26□□□□□ -0.29
RETREG3-201ENST00000309428 GRAMD1AQ96CP6 724 aa13.26□□□□□ -0.29
RETREG3-201ENST00000309428 MTBPQ96DY7 904 aa13.26□□□□□ -0.29
RETREG3-201ENST00000309428 KLK14Q9P0G3 267 aa13.26□□□□□ -0.29
RETREG3-201ENST00000309428 INPP5FQ9Y2H2 1132 aa13.26□□□□□ -0.29
RETREG3-201ENST00000309428 M0QYV0 167 aa13.26□□□□□ -0.29
RETREG3-201ENST00000309428 RGS20O76081 388 aa13.26□□□□□ -0.29
RETREG3-201ENST00000309428 OATP04181 439 aa13.26□□□□□ -0.29
RETREG3-201ENST00000309428 WLSQ5T9L3 541 aa13.26□□□□□ -0.29
RETREG3-201ENST00000309428 EEF1DP3Q658K8 133 aa13.26□□□□□ -0.29
RETREG3-201ENST00000309428 IZUMO2Q6UXV1 221 aa13.26□□□□□ -0.29
RETREG3-201ENST00000309428 FAM13CQ8NE31 585 aa13.26□□□□□ -0.29
RETREG3-201ENST00000309428 SHC3Q92529 594 aa13.26□□□□□ -0.29
RETREG3-201ENST00000309428 DCPSQ96C86 337 aaKnown RBP13.26□□□□□ -0.29
RETREG3-201ENST00000309428 MAGEB18Q96M61 343 aa13.26□□□□□ -0.29
RETREG3-201ENST00000309428 LPIN3Q9BQK8 851 aa13.26□□□□□ -0.29
RETREG3-201ENST00000309428 GGA2Q9UJY4 613 aa13.26□□□□□ -0.29
RETREG3-201ENST00000309428 PCDHB2Q9Y5E7 798 aa13.26□□□□□ -0.29
RETREG3-201ENST00000309428 LAMA3Q16787 3333 aa13.26□□□□□ -0.29
RETREG3-201ENST00000309428 TNNC2P02585 160 aa13.25□□□□□ -0.29
RETREG3-201ENST00000309428 UBA1P22314 1058 aaKnown RBP13.25□□□□□ -0.29
RETREG3-201ENST00000309428 TRIP10Q15642 601 aa13.25□□□□□ -0.29
RETREG3-201ENST00000309428 EML3Q32P44 896 aa13.25□□□□□ -0.29
RETREG3-201ENST00000309428 UCMAQ8WVF2 138 aa13.25□□□□□ -0.29
RETREG3-201ENST00000309428 CKAP2Q8WWK9 683 aa13.25□□□□□ -0.29
RETREG3-201ENST00000309428 ZNF606Q8WXB4 792 aa13.25□□□□□ -0.29
RETREG3-201ENST00000309428 RNF181Q9P0P0 153 aa13.25□□□□□ -0.29
RETREG3-201ENST00000309428 ITGB3P05106 788 aa13.25□□□□□ -0.29
RETREG3-201ENST00000309428 PEX5P50542 639 aa13.25□□□□□ -0.29
RETREG3-201ENST00000309428 VGLL4Q14135 290 aa13.25□□□□□ -0.29
RETREG3-201ENST00000309428 TAF5Q15542 800 aa13.25□□□□□ -0.29
RETREG3-201ENST00000309428 LACTB2Q53H82 288 aaPredicted RBP13.25□□□□□ -0.29
RETREG3-201ENST00000309428 FAM102AQ5T9C2 384 aaPredicted RBP13.25□□□□□ -0.29
RETREG3-201ENST00000309428 MAP4K3Q8IVH8 894 aa13.25□□□□□ -0.29
RETREG3-201ENST00000309428 POU5F2Q8N7G0 328 aa13.25□□□□□ -0.29
RETREG3-201ENST00000309428 PSPC1Q8WXF1 523 aaKnown RBP13.25□□□□□ -0.29
RETREG3-201ENST00000309428 NOCTQ9UK39 431 aaKnown RBP13.25□□□□□ -0.29
RETREG3-201ENST00000309428 CDK5RAP2Q96SN8 1893 aa13.25□□□□□ -0.29
RETREG3-201ENST00000309428 CST8O60676 142 aa13.25□□□□□ -0.29
RETREG3-201ENST00000309428 SUPT20HL2P0C7V6 817 aa13.25□□□□□ -0.29
RETREG3-201ENST00000309428 MYL2P10916 166 aa13.25□□□□□ -0.29
RETREG3-201ENST00000309428 CYTH1Q15438 398 aa13.25□□□□□ -0.29
RETREG3-201ENST00000309428 CLEC16AQ2KHT3 1053 aa13.25□□□□□ -0.29
RETREG3-201ENST00000309428 SUPT20HL1Q3ZLR7 823 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms