RNA–Protein interactions for RNA: ENST00000309246.9

TPT1-201, Transcript of tumor protein, translationally-controlled 1, humanhuman

TSL 1 (best) BASIC

Gene TPT1, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPT1-201ENST00000309246 CSH1P0DML2 217 aa13.1□□□□□ -0.31
TPT1-201ENST00000309246 CSH2P0DML3 217 aa13.1□□□□□ -0.31
TPT1-201ENST00000309246 IDEP14735 1019 aa13.1□□□□□ -0.31
TPT1-201ENST00000309246 ARSAP15289 507 aa13.1□□□□□ -0.31
TPT1-201ENST00000309246 GAP43P17677 238 aa13.1□□□□□ -0.31
TPT1-201ENST00000309246 HOXA6P31267 233 aa13.1□□□□□ -0.31
TPT1-201ENST00000309246 PNPLA4P41247 253 aa13.1□□□□□ -0.31
TPT1-201ENST00000309246 CEBPZQ03701 1054 aaKnown RBP13.1□□□□□ -0.31
TPT1-201ENST00000309246 NFE2Q16621 373 aaPredicted RBP13.1□□□□□ -0.31
TPT1-201ENST00000309246 DDR2Q16832 855 aa13.1□□□□□ -0.31
TPT1-201ENST00000309246 TMEM196Q5HYL7 178 aa13.1□□□□□ -0.31
TPT1-201ENST00000309246 RRAGBQ5VZM2 374 aa13.1□□□□□ -0.31
TPT1-201ENST00000309246 FAM173BQ6P4H8 233 aa13.1□□□□□ -0.31
TPT1-201ENST00000309246 SV2BQ7L1I2 683 aa13.1□□□□□ -0.31
TPT1-201ENST00000309246 OSTM1Q86WC4 334 aa13.1□□□□□ -0.31
TPT1-201ENST00000309246 MRPS31Q92665 395 aaKnown RBP13.1□□□□□ -0.31
TPT1-201ENST00000309246 FGFBP2Q9BYJ0 223 aa13.1□□□□□ -0.31
TPT1-201ENST00000309246 KIF9Q9HAQ2 790 aa13.1□□□□□ -0.31
TPT1-201ENST00000309246 TDP1Q9NUW8 608 aa13.1□□□□□ -0.31
TPT1-201ENST00000309246 DDX43Q9NXZ2 648 aaKnown RBP13.1□□□□□ -0.31
TPT1-201ENST00000309246 RBAKQ9NYW8 714 aaPredicted RBP13.1□□□□□ -0.31
TPT1-201ENST00000309246 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.1□□□□□ -0.31
TPT1-201ENST00000309246 ZMYM5Q9UJ78 669 aa13.1□□□□□ -0.31
TPT1-201ENST00000309246 WDR87Q6ZQQ6 2873 aa13.09□□□□□ -0.31
TPT1-201ENST00000309246 HUS1O60921 280 aa13.09□□□□□ -0.31
TPT1-201ENST00000309246 EGFP01133 1207 aa13.09□□□□□ -0.31
TPT1-201ENST00000309246 KRT19P08727 400 aa13.09□□□□□ -0.31
TPT1-201ENST00000309246 CYP2F1P24903 491 aa13.09□□□□□ -0.31
TPT1-201ENST00000309246 DDX6P26196 483 aaKnown RBP eCLIP13.09□□□□□ -0.31
TPT1-201ENST00000309246 TXLNAP40222 546 aa13.09□□□□□ -0.31
TPT1-201ENST00000309246 GRSF1Q12849 480 aaKnown RBP eCLIP13.09□□□□□ -0.31
TPT1-201ENST00000309246 PPM1JQ5JR12 505 aa13.09□□□□□ -0.31
TPT1-201ENST00000309246 INTS6LQ5JSJ4 861 aaKnown RBP13.09□□□□□ -0.31
TPT1-201ENST00000309246 NAIF1Q69YI7 327 aaPredicted RBP13.09□□□□□ -0.31
TPT1-201ENST00000309246 CC2D1AQ6P1N0 951 aaPredicted RBP13.09□□□□□ -0.31
TPT1-201ENST00000309246 MON1AQ86VX9 555 aa13.09□□□□□ -0.31
TPT1-201ENST00000309246 SYCP3Q8IZU3 236 aa13.09□□□□□ -0.31
TPT1-201ENST00000309246 CSGALNACT2Q8N6G5 542 aa13.09□□□□□ -0.31
TPT1-201ENST00000309246 TTC16Q8NEE8 873 aa13.09□□□□□ -0.31
TPT1-201ENST00000309246 CXorf38Q8TB03 319 aa13.09□□□□□ -0.31
TPT1-201ENST00000309246 LEO1Q8WVC0 666 aaPredicted RBP13.09□□□□□ -0.31
TPT1-201ENST00000309246 NUP205Q92621 2012 aa13.09□□□□□ -0.31
TPT1-201ENST00000309246 PKMYT1Q99640 499 aa13.09□□□□□ -0.31
TPT1-201ENST00000309246 CBWD1Q9BRT8 395 aa13.09□□□□□ -0.31
TPT1-201ENST00000309246 TMEM121BQ9BXQ6 578 aaPredicted RBP13.09□□□□□ -0.31
TPT1-201ENST00000309246 PCIF1Q9H4Z3 704 aa13.09□□□□□ -0.31
TPT1-201ENST00000309246 PDE11AQ9HCR9 933 aa13.09□□□□□ -0.31
TPT1-201ENST00000309246 TRPC7Q9HCX4 862 aa13.09□□□□□ -0.31
TPT1-201ENST00000309246 POLR3BQ9NW08 1133 aaPredicted RBP13.09□□□□□ -0.31
TPT1-201ENST00000309246 GTF3C4Q9UKN8 822 aa13.09□□□□□ -0.31
TPT1-201ENST00000309246 SRPRBQ9Y5M8 271 aaKnown RBP13.09□□□□□ -0.31
TPT1-201ENST00000309246 SNX9Q9Y5X1 595 aa13.09□□□□□ -0.31
TPT1-201ENST00000309246 TRDMT1O14717 391 aaKnown RBP13.08□□□□□ -0.32
TPT1-201ENST00000309246 AXIN1O15169 862 aa13.08□□□□□ -0.32
TPT1-201ENST00000309246 RNF40O75150 1001 aa13.08□□□□□ -0.32
TPT1-201ENST00000309246 NOL4O94818 638 aa13.08□□□□□ -0.32
TPT1-201ENST00000309246 LDHAP00338 332 aaKnown RBP13.08□□□□□ -0.32
TPT1-201ENST00000309246 ADRB1P08588 477 aa13.08□□□□□ -0.32
TPT1-201ENST00000309246 GARTP22102 1010 aa13.08□□□□□ -0.32
TPT1-201ENST00000309246 RPL10AP62906 217 aaKnown RBP13.08□□□□□ -0.32
TPT1-201ENST00000309246 MYL7Q01449 175 aa13.08□□□□□ -0.32
TPT1-201ENST00000309246 RESTQ13127 1097 aa13.08□□□□□ -0.32
TPT1-201ENST00000309246 CCDC6Q16204 474 aa13.08□□□□□ -0.32
TPT1-201ENST00000309246 LMBRD2Q68DH5 695 aaPredicted RBP13.08□□□□□ -0.32
TPT1-201ENST00000309246 ADGRF2Q8IZF7 708 aa13.08□□□□□ -0.32
TPT1-201ENST00000309246 TMEM86AQ8N2M4 240 aa13.08□□□□□ -0.32
TPT1-201ENST00000309246 LRRC52Q8N7C0 313 aa13.08□□□□□ -0.32
TPT1-201ENST00000309246 SPRYD3Q8NCJ5 442 aa13.08□□□□□ -0.32
TPT1-201ENST00000309246 CACTINQ8WUQ7 758 aaKnown RBP13.08□□□□□ -0.32
TPT1-201ENST00000309246 GAB3Q8WWW8 586 aa13.08□□□□□ -0.32
TPT1-201ENST00000309246 SLC22A12Q96S37 553 aa13.08□□□□□ -0.32
TPT1-201ENST00000309246 ACBD6Q9BR61 282 aa13.08□□□□□ -0.32
TPT1-201ENST00000309246 PANK2Q9BZ23 570 aa13.08□□□□□ -0.32
TPT1-201ENST00000309246 MTMR12Q9C0I1 747 aa13.08□□□□□ -0.32
TPT1-201ENST00000309246 ARRDC1-AS1Q9H2J1 176 aa13.08□□□□□ -0.32
TPT1-201ENST00000309246 FBRSL1Q9HCM7 1045 aaKnown RBP13.08□□□□□ -0.32
TPT1-201ENST00000309246 ABCB6Q9NP58 842 aa13.08□□□□□ -0.32
TPT1-201ENST00000309246 OLFML3Q9NRN5 406 aa13.08□□□□□ -0.32
TPT1-201ENST00000309246 SIX4Q9UIU6 781 aa13.08□□□□□ -0.32
TPT1-201ENST00000309246 ITGA11Q9UKX5 1188 aa13.08□□□□□ -0.32
TPT1-201ENST00000309246 SLC8A2Q9UPR5 921 aa13.08□□□□□ -0.32
TPT1-201ENST00000309246 FRYLO94915 3013 aa13.08□□□□□ -0.32
TPT1-201ENST00000309246 MYOFQ9NZM1 2061 aa13.08□□□□□ -0.32
TPT1-201ENST00000309246 CACNA1BQ00975 2339 aa13.07□□□□□ -0.32
TPT1-201ENST00000309246 THADAQ6YHU6 1953 aa13.07□□□□□ -0.32
TPT1-201ENST00000309246 A0A087X0B3 334 aa13.07□□□□□ -0.32
TPT1-201ENST00000309246 RPP40O75818 363 aaKnown RBP13.07□□□□□ -0.32
TPT1-201ENST00000309246 PRPF6O94906 941 aaKnown RBP13.07□□□□□ -0.32
TPT1-201ENST00000309246 TMEM191BP0C7N4 346 aa13.07□□□□□ -0.32
TPT1-201ENST00000309246 CCDC192P0DO97 292 aa13.07□□□□□ -0.32
TPT1-201ENST00000309246 PDCP20941 246 aa13.07□□□□□ -0.32
TPT1-201ENST00000309246 STAT6P42226 847 aa13.07□□□□□ -0.32
TPT1-201ENST00000309246 CUL4AQ13619 759 aa13.07□□□□□ -0.32
TPT1-201ENST00000309246 ZNF268Q14587 947 aaPredicted RBP13.07□□□□□ -0.32
TPT1-201ENST00000309246 MTF1Q14872 753 aa13.07□□□□□ -0.32
TPT1-201ENST00000309246 SF3A2Q15428 464 aaKnown RBP13.07□□□□□ -0.32
TPT1-201ENST00000309246 ZNF77Q15935 545 aa13.07□□□□□ -0.32
TPT1-201ENST00000309246 AASDHQ4L235 1098 aaPredicted RBP13.07□□□□□ -0.32
TPT1-201ENST00000309246 KBTBD6Q86V97 674 aa13.07□□□□□ -0.32
TPT1-201ENST00000309246 SPATA2LQ8IUW3 424 aaPredicted RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms