RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 GNG11P61952 73 aa5.37□□□□□ -1.55
CKS1B-201ENST00000308987 ZNF200P98182 395 aaPredicted RBP5.37□□□□□ -1.55
CKS1B-201ENST00000308987 CYP4F8P98187 520 aa5.37□□□□□ -1.55
CKS1B-201ENST00000308987 LMNB2Q03252 620 aa5.37□□□□□ -1.55
CKS1B-201ENST00000308987 CUL4BQ13620 913 aa5.37□□□□□ -1.55
CKS1B-201ENST00000308987 WTAPQ15007 396 aa5.37□□□□□ -1.55
CKS1B-201ENST00000308987 PTGISQ16647 500 aa5.37□□□□□ -1.55
CKS1B-201ENST00000308987 LY6KQ17RY6 165 aa5.37□□□□□ -1.55
CKS1B-201ENST00000308987 WHAMMP3Q1A5X7 153 aa5.37□□□□□ -1.55
CKS1B-201ENST00000308987 BBS9Q3SYG4 887 aa5.37□□□□□ -1.55
CKS1B-201ENST00000308987 FAM47CQ5HY64 1035 aa5.37□□□□□ -1.55
CKS1B-201ENST00000308987 TMEM31Q5JXX7 168 aa5.37□□□□□ -1.55
CKS1B-201ENST00000308987 RPTNQ6XPR3 784 aa5.37□□□□□ -1.55
CKS1B-201ENST00000308987 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.37□□□□□ -1.55
CKS1B-201ENST00000308987 ZNF662Q6ZS27 426 aa5.37□□□□□ -1.55
CKS1B-201ENST00000308987 APTXQ7Z2E3 356 aaKnown RBP5.37□□□□□ -1.55
CKS1B-201ENST00000308987 SRGAP1Q7Z6B7 1085 aa5.37□□□□□ -1.55
CKS1B-201ENST00000308987 PPFIBP1Q86W92 1011 aa5.37□□□□□ -1.55
CKS1B-201ENST00000308987 MICU3Q86XE3 530 aa5.37□□□□□ -1.55
CKS1B-201ENST00000308987 TMTC1Q8IUR5 882 aa5.37□□□□□ -1.55
CKS1B-201ENST00000308987 FAM178BQ8IXR5 827 aa5.37□□□□□ -1.55
CKS1B-201ENST00000308987 ZNF655Q8N720 491 aaPredicted RBP5.37□□□□□ -1.55
CKS1B-201ENST00000308987 IQUBQ8NA54 791 aa5.37□□□□□ -1.55
CKS1B-201ENST00000308987 FANCBQ8NB91 859 aa5.37□□□□□ -1.55
CKS1B-201ENST00000308987 GOLM1Q8NBJ4 401 aa5.37□□□□□ -1.55
CKS1B-201ENST00000308987 NUP43Q8NFH3 380 aa5.37□□□□□ -1.55
CKS1B-201ENST00000308987 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.37□□□□□ -1.55
CKS1B-201ENST00000308987 FNIP1Q8TF40 1166 aa5.37□□□□□ -1.55
CKS1B-201ENST00000308987 DCAF4Q8WV16 495 aa5.37□□□□□ -1.55
CKS1B-201ENST00000308987 AFG1LQ8WV93 481 aa5.37□□□□□ -1.55
CKS1B-201ENST00000308987 PHKBQ93100 1093 aa5.37□□□□□ -1.55
CKS1B-201ENST00000308987 EXOC4Q96A65 974 aa5.37□□□□□ -1.55
CKS1B-201ENST00000308987 AIFM3Q96NN9 605 aa5.37□□□□□ -1.55
CKS1B-201ENST00000308987 CLIC6Q96NY7 704 aa5.37□□□□□ -1.55
CKS1B-201ENST00000308987 SLC26A6Q9BXS9 759 aa5.37□□□□□ -1.55
CKS1B-201ENST00000308987 UBE2ZQ9H832 354 aaPredicted RBP5.37□□□□□ -1.55
CKS1B-201ENST00000308987 BRMS1Q9HCU9 246 aa5.37□□□□□ -1.55
CKS1B-201ENST00000308987 TNFRSF12AQ9NP84 129 aa5.37□□□□□ -1.55
CKS1B-201ENST00000308987 RBM28Q9NW13 759 aaKnown RBP5.37□□□□□ -1.55
CKS1B-201ENST00000308987 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.37□□□□□ -1.55
CKS1B-201ENST00000308987 LIMA1Q9UHB6 759 aaKnown RBP5.37□□□□□ -1.55
CKS1B-201ENST00000308987 CDC23Q9UJX2 597 aa5.37□□□□□ -1.55
CKS1B-201ENST00000308987 RAB21Q9UL25 225 aa5.37□□□□□ -1.55
CKS1B-201ENST00000308987 MTUS1Q9ULD2 1270 aa5.37□□□□□ -1.55
CKS1B-201ENST00000308987 COG5Q9UP83 839 aa5.37□□□□□ -1.55
CKS1B-201ENST00000308987 FNDC1Q4ZHG4 1894 aaPredicted RBP5.37□□□□□ -1.55
CKS1B-201ENST00000308987 LOC102724159A0A0B4J2E5 919 aa5.36□□□□□ -1.55
CKS1B-201ENST00000308987 TSPY2A6NKD2 308 aa5.36□□□□□ -1.55
CKS1B-201ENST00000308987 BTBD18B2RXH4 712 aa5.36□□□□□ -1.55
CKS1B-201ENST00000308987 TULP2O00295 520 aa5.36□□□□□ -1.55
CKS1B-201ENST00000308987 POLR2DO15514 142 aaKnown RBP5.36□□□□□ -1.55
CKS1B-201ENST00000308987 MFAP3LO75121 409 aa5.36□□□□□ -1.55
CKS1B-201ENST00000308987 EIF3JO75822 258 aaKnown RBP5.36□□□□□ -1.55
CKS1B-201ENST00000308987 GJB5O95377 273 aa5.36□□□□□ -1.55
CKS1B-201ENST00000308987 PLA2G1BP04054 148 aaKnown RBP5.36□□□□□ -1.55
CKS1B-201ENST00000308987 MYL1P05976 194 aa5.36□□□□□ -1.55
CKS1B-201ENST00000308987 MMP3P08254 477 aa5.36□□□□□ -1.55
CKS1B-201ENST00000308987 SUPT20HL2P0C7V6 817 aa5.36□□□□□ -1.55
CKS1B-201ENST00000308987 MSL3P1P0C860 447 aa5.36□□□□□ -1.55
CKS1B-201ENST00000308987 TXNP10599 105 aaKnown RBP5.36□□□□□ -1.55
CKS1B-201ENST00000308987 CKBP12277 381 aa5.36□□□□□ -1.55
CKS1B-201ENST00000308987 MCM3P25205 808 aa5.36□□□□□ -1.55
CKS1B-201ENST00000308987 ERVK-21P61565 698 aa5.36□□□□□ -1.55
CKS1B-201ENST00000308987 AKAP17AQ02040 695 aaKnown RBP5.36□□□□□ -1.55
CKS1B-201ENST00000308987 RBL2Q08999 1139 aa5.36□□□□□ -1.55
CKS1B-201ENST00000308987 ZNF543Q08ER8 600 aa5.36□□□□□ -1.55
CKS1B-201ENST00000308987 PWP2Q15269 919 aaKnown RBP5.36□□□□□ -1.55
CKS1B-201ENST00000308987 SEC23AQ15436 765 aa5.36□□□□□ -1.55
CKS1B-201ENST00000308987 AAK1Q2M2I8 961 aa5.36□□□□□ -1.55
CKS1B-201ENST00000308987 CCDC96Q2M329 555 aa5.36□□□□□ -1.55
CKS1B-201ENST00000308987 RNF207Q6ZRF8 634 aa5.36□□□□□ -1.55
CKS1B-201ENST00000308987 SESTD1Q86VW0 696 aa5.36□□□□□ -1.55
CKS1B-201ENST00000308987 ZNF654Q8IZM8 581 aa5.36□□□□□ -1.55
CKS1B-201ENST00000308987 PDILTQ8N807 584 aa5.36□□□□□ -1.55
CKS1B-201ENST00000308987 ANKRD20A12PQ8NF67 263 aa5.36□□□□□ -1.55
CKS1B-201ENST00000308987 AFAP1L1Q8TED9 768 aa5.36□□□□□ -1.55
CKS1B-201ENST00000308987 SCFD2Q8WU76 684 aa5.36□□□□□ -1.55
CKS1B-201ENST00000308987 ESR2Q92731 530 aa5.36□□□□□ -1.55
CKS1B-201ENST00000308987 IQCDQ96DY2 449 aa5.36□□□□□ -1.55
CKS1B-201ENST00000308987 RPGRIP1Q96KN7 1286 aa5.36□□□□□ -1.55
CKS1B-201ENST00000308987 TAAR1Q96RJ0 339 aa5.36□□□□□ -1.55
CKS1B-201ENST00000308987 WDR24Q96S15 920 aa5.36□□□□□ -1.55
CKS1B-201ENST00000308987 C17orf80Q9BSJ5 609 aa5.36□□□□□ -1.55
CKS1B-201ENST00000308987 PHF20Q9BVI0 1012 aa5.36□□□□□ -1.55
CKS1B-201ENST00000308987 FUT8Q9BYC5 575 aa5.36□□□□□ -1.55
CKS1B-201ENST00000308987 PARD6BQ9BYG5 372 aa5.36□□□□□ -1.55
CKS1B-201ENST00000308987 ACBD3Q9H3P7 528 aa5.36□□□□□ -1.55
CKS1B-201ENST00000308987 BCAS3Q9H6U6 928 aa5.36□□□□□ -1.55
CKS1B-201ENST00000308987 ZNF287Q9HBT7 754 aa5.36□□□□□ -1.55
CKS1B-201ENST00000308987 GJB4Q9NTQ9 266 aa5.36□□□□□ -1.55
CKS1B-201ENST00000308987 RMND1Q9NWS8 449 aa5.36□□□□□ -1.55
CKS1B-201ENST00000308987 CWC15Q9P013 229 aaKnown RBP5.36□□□□□ -1.55
CKS1B-201ENST00000308987 HDAC6Q9UBN7 1215 aa5.36□□□□□ -1.55
CKS1B-201ENST00000308987 ADD3Q9UEY8 706 aaKnown RBP5.36□□□□□ -1.55
CKS1B-201ENST00000308987 FBXL21Q9UKT6 434 aa5.36□□□□□ -1.55
CKS1B-201ENST00000308987 GPR55Q9Y2T6 319 aaPredicted RBP5.36□□□□□ -1.55
CKS1B-201ENST00000308987 POLR3KQ9Y2Y1 108 aaPredicted RBP5.36□□□□□ -1.55
CKS1B-201ENST00000308987 PLXNA3P51805 1871 aa5.36□□□□□ -1.55
CKS1B-201ENST00000308987 GVINP1Q7Z2Y8 2422 aa5.35□□□□□ -1.55
CKS1B-201ENST00000308987 A0A1W2PQJ5 194 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms