RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 SLC46A2Q9BY10 475 aa21.23■□□□□ 0.99
PDZRN3-202ENST00000308537 OSBPL6Q9BZF3 934 aa21.23■□□□□ 0.99
PDZRN3-202ENST00000308537 TASP1Q9H6P5 420 aa21.23■□□□□ 0.99
PDZRN3-202ENST00000308537 NOL4O94818 638 aa21.22■□□□□ 0.99
PDZRN3-202ENST00000308537 FGF19O95750 216 aa21.22■□□□□ 0.99
PDZRN3-202ENST00000308537 GDI1P31150 447 aa21.22■□□□□ 0.99
PDZRN3-202ENST00000308537 MCCD1P59942 119 aaPredicted RBP21.22■□□□□ 0.99
PDZRN3-202ENST00000308537 BECN1Q14457 450 aa21.22■□□□□ 0.99
PDZRN3-202ENST00000308537 VEPH1Q14D04 833 aa21.22■□□□□ 0.99
PDZRN3-202ENST00000308537 ANGPT1Q15389 498 aa21.22■□□□□ 0.99
PDZRN3-202ENST00000308537 TPRG1Q6ZUI0 275 aa21.22■□□□□ 0.99
PDZRN3-202ENST00000308537 MAML2Q8IZL2 1156 aaPredicted RBP21.22■□□□□ 0.99
PDZRN3-202ENST00000308537 ATOH1Q92858 354 aaPredicted RBP21.22■□□□□ 0.99
PDZRN3-202ENST00000308537 MYLPFQ96A32 169 aa21.22■□□□□ 0.99
PDZRN3-202ENST00000308537 ELMO3Q96BJ8 720 aa21.22■□□□□ 0.99
PDZRN3-202ENST00000308537 MYRFLQ96LU7 910 aa21.22■□□□□ 0.99
PDZRN3-202ENST00000308537 SLITRK6Q9H5Y7 841 aa21.22■□□□□ 0.99
PDZRN3-202ENST00000308537 BRD9Q9H8M2 597 aa21.22■□□□□ 0.99
PDZRN3-202ENST00000308537 TMEM30AQ9NV96 361 aa21.22■□□□□ 0.99
PDZRN3-202ENST00000308537 CDH9Q9ULB4 789 aa21.22■□□□□ 0.99
PDZRN3-202ENST00000308537 GPR179Q6PRD1 2367 aa21.21■□□□□ 0.99
PDZRN3-202ENST00000308537 FAM163BP0C2L3 166 aa21.21■□□□□ 0.99
PDZRN3-202ENST00000308537 CDC25CP30307 473 aa21.21■□□□□ 0.99
PDZRN3-202ENST00000308537 MAGEA11P43364 429 aa21.21■□□□□ 0.99
PDZRN3-202ENST00000308537 WDR72Q3MJ13 1102 aa21.21■□□□□ 0.99
PDZRN3-202ENST00000308537 GUF1Q8N442 669 aaKnown RBP21.21■□□□□ 0.99
PDZRN3-202ENST00000308537 RIN3Q8TB24 985 aa21.21■□□□□ 0.99
PDZRN3-202ENST00000308537 FAM200AQ8TCP9 573 aa21.21■□□□□ 0.99
PDZRN3-202ENST00000308537 CLDN23Q96B33 292 aa21.21■□□□□ 0.99
PDZRN3-202ENST00000308537 TRMT2BQ96GJ1 504 aaKnown RBP21.21■□□□□ 0.99
PDZRN3-202ENST00000308537 IRF2BPLQ9H1B7 796 aa21.21■□□□□ 0.99
PDZRN3-202ENST00000308537 EP300Q09472 2414 aaPredicted RBP21.21■□□□□ 0.99
PDZRN3-202ENST00000308537 WDR87Q6ZQQ6 2873 aa21.2■□□□□ 0.98
PDZRN3-202ENST00000308537 OTOGLQ3ZCN5 2332 aa21.2■□□□□ 0.98
PDZRN3-202ENST00000308537 CFAP54Q96N23 3096 aa21.2■□□□□ 0.98
PDZRN3-202ENST00000308537 STK25O00506 426 aa21.2■□□□□ 0.98
PDZRN3-202ENST00000308537 ATICP31939 592 aa21.2■□□□□ 0.98
PDZRN3-202ENST00000308537 NUCB2P80303 420 aa21.2■□□□□ 0.98
PDZRN3-202ENST00000308537 ZACNQ401N2 412 aa21.2■□□□□ 0.98
PDZRN3-202ENST00000308537 WDR44Q5JSH3 913 aa21.2■□□□□ 0.98
PDZRN3-202ENST00000308537 TMC2Q8TDI7 906 aa21.2■□□□□ 0.98
PDZRN3-202ENST00000308537 IRF7Q92985 503 aa21.2■□□□□ 0.98
PDZRN3-202ENST00000308537 E2F7Q96AV8 911 aa21.2■□□□□ 0.98
PDZRN3-202ENST00000308537 PCED1BQ96HM7 432 aa21.2■□□□□ 0.98
PDZRN3-202ENST00000308537 SMG9Q9H0W8 520 aaKnown RBP21.2■□□□□ 0.98
PDZRN3-202ENST00000308537 SDCBP2Q9H190 292 aa21.2■□□□□ 0.98
PDZRN3-202ENST00000308537 DPEP3Q9H4B8 488 aa21.2■□□□□ 0.98
PDZRN3-202ENST00000308537 OBP2AQ9NY56 170 aa21.2■□□□□ 0.98
PDZRN3-202ENST00000308537 MAPK8IP1Q9UQF2 711 aa21.2■□□□□ 0.98
PDZRN3-202ENST00000308537 SLC38A8A6NNN8 435 aa21.19■□□□□ 0.98
PDZRN3-202ENST00000308537 MAPK13O15264 365 aa21.19■□□□□ 0.98
PDZRN3-202ENST00000308537 CHADO15335 359 aa21.19■□□□□ 0.98
PDZRN3-202ENST00000308537 AKAP3O75969 853 aa21.19■□□□□ 0.98
PDZRN3-202ENST00000308537 PDGFRBP09619 1106 aa21.19■□□□□ 0.98
PDZRN3-202ENST00000308537 CSH1P0DML2 217 aa21.19■□□□□ 0.98
PDZRN3-202ENST00000308537 CSH2P0DML3 217 aa21.19■□□□□ 0.98
PDZRN3-202ENST00000308537 CACNA2D1P54289 1103 aa21.19■□□□□ 0.98
PDZRN3-202ENST00000308537 SPATA2LQ8IUW3 424 aaPredicted RBP21.19■□□□□ 0.98
PDZRN3-202ENST00000308537 CMTM8Q8IZV2 173 aa21.19■□□□□ 0.98
PDZRN3-202ENST00000308537 SPATA20Q8TB22 786 aa21.19■□□□□ 0.98
PDZRN3-202ENST00000308537 MYCBPAPQ8TBZ2 947 aa21.19■□□□□ 0.98
PDZRN3-202ENST00000308537 MMS19Q96T76 1030 aa21.19■□□□□ 0.98
PDZRN3-202ENST00000308537 SMYD3Q9H7B4 428 aa21.19■□□□□ 0.98
PDZRN3-202ENST00000308537 CCL26Q9Y258 94 aa21.19■□□□□ 0.98
PDZRN3-202ENST00000308537 FAM170BA6NMN3 283 aa21.18■□□□□ 0.98
PDZRN3-202ENST00000308537 AP3M2P53677 418 aa21.18■□□□□ 0.98
PDZRN3-202ENST00000308537 RPL10AP62906 217 aaKnown RBP21.18■□□□□ 0.98
PDZRN3-202ENST00000308537 PNOCQ13519 176 aa21.18■□□□□ 0.98
PDZRN3-202ENST00000308537 UBXN2BQ14CS0 331 aa21.18■□□□□ 0.98
PDZRN3-202ENST00000308537 VSTM1Q6UX27 236 aa21.18■□□□□ 0.98
PDZRN3-202ENST00000308537 SV2AQ7L0J3 742 aa21.18■□□□□ 0.98
PDZRN3-202ENST00000308537 SMYD4Q8IYR2 804 aaPredicted RBP21.18■□□□□ 0.98
PDZRN3-202ENST00000308537 SYAP1Q96A49 352 aaPredicted RBP21.18■□□□□ 0.98
PDZRN3-202ENST00000308537 R3HCC1Q9Y3T6 440 aaKnown RBP21.18■□□□□ 0.98
PDZRN3-202ENST00000308537 HELZP42694 1942 aaKnown RBP21.17■□□□□ 0.98
PDZRN3-202ENST00000308537 ZNF263O14978 683 aa21.17■□□□□ 0.98
PDZRN3-202ENST00000308537 BDNFP23560 247 aa21.17■□□□□ 0.98
PDZRN3-202ENST00000308537 GNL1P36915 607 aaPredicted RBP21.17■□□□□ 0.98
PDZRN3-202ENST00000308537 MLLT6P55198 1093 aaPredicted RBP21.17■□□□□ 0.98
PDZRN3-202ENST00000308537 CDH8P55286 799 aa21.17■□□□□ 0.98
PDZRN3-202ENST00000308537 USP46P62068 366 aa21.17■□□□□ 0.98
PDZRN3-202ENST00000308537 NCOA4Q13772 614 aa21.17■□□□□ 0.98
PDZRN3-202ENST00000308537 ARHGAP15Q53QZ3 475 aa21.17■□□□□ 0.98
PDZRN3-202ENST00000308537 TXNDC8Q6A555 127 aa21.17■□□□□ 0.98
PDZRN3-202ENST00000308537 C4orf50Q6ZRC1 276 aa21.17■□□□□ 0.98
PDZRN3-202ENST00000308537 C1orf210Q8IVY1 113 aa21.17■□□□□ 0.98
PDZRN3-202ENST00000308537 USP13Q92995 863 aaPredicted RBP21.17■□□□□ 0.98
PDZRN3-202ENST00000308537 ZFYVE19Q96K21 471 aa21.17■□□□□ 0.98
PDZRN3-202ENST00000308537 SPATA17Q96L03 361 aa21.17■□□□□ 0.98
PDZRN3-202ENST00000308537 SLC22A12Q96S37 553 aa21.17■□□□□ 0.98
PDZRN3-202ENST00000308537 NXF1Q9UBU9 619 aaKnown RBP21.17■□□□□ 0.98
PDZRN3-202ENST00000308537 MAGED2Q9UNF1 606 aaPredicted RBP21.17■□□□□ 0.98
PDZRN3-202ENST00000308537 ZNF292O60281 2723 aa21.17■□□□□ 0.98
PDZRN3-202ENST00000308537 SOBPA7XYQ1 873 aa21.16■□□□□ 0.98
PDZRN3-202ENST00000308537 IKBKBO14920 756 aa21.16■□□□□ 0.98
PDZRN3-202ENST00000308537 CALUO43852 315 aaPredicted RBP21.16■□□□□ 0.98
PDZRN3-202ENST00000308537 ASS1P00966 412 aaKnown RBP21.16■□□□□ 0.98
PDZRN3-202ENST00000308537 PTPN1P18031 435 aaKnown RBP21.16■□□□□ 0.98
PDZRN3-202ENST00000308537 RFX1P22670 979 aa21.16■□□□□ 0.98
PDZRN3-202ENST00000308537 NR2F2P24468 414 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms