RNA–Protein interactions for RNA: ENST00000308466.12

MUC4-201, Transcript of mucin 4, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC4, Length 3,806 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4-201ENST00000308466 TFDP3Q5H9I0 405 aa11.23□□□□□ -0.61
MUC4-201ENST00000308466 C1orf220Q5T0J3 134 aa11.23□□□□□ -0.61
MUC4-201ENST00000308466 ACBD5Q5T8D3 534 aaPredicted RBP11.23□□□□□ -0.61
MUC4-201ENST00000308466 ZNF354CQ86Y25 554 aa11.23□□□□□ -0.61
MUC4-201ENST00000308466 ATP11CQ8NB49 1132 aa11.23□□□□□ -0.61
MUC4-201ENST00000308466 PPP1R13LQ8WUF5 828 aa11.23□□□□□ -0.61
MUC4-201ENST00000308466 EZH1Q92800 747 aaPredicted RBP11.23□□□□□ -0.61
MUC4-201ENST00000308466 HPDLQ96IR7 371 aa11.23□□□□□ -0.61
MUC4-201ENST00000308466 ACAP3Q96P50 834 aa11.23□□□□□ -0.61
MUC4-201ENST00000308466 FDXACB1Q9BRP7 624 aaPredicted RBP11.23□□□□□ -0.61
MUC4-201ENST00000308466 DHX35Q9H5Z1 703 aaKnown RBP11.23□□□□□ -0.61
MUC4-201ENST00000308466 NOD2Q9HC29 1040 aa11.23□□□□□ -0.61
MUC4-201ENST00000308466 ARHGAP28Q9P2N2 729 aa11.23□□□□□ -0.61
MUC4-201ENST00000308466 DDX60LQ5H9U9 1706 aaKnown RBP11.22□□□□□ -0.61
MUC4-201ENST00000308466 NRAPQ86VF7 1730 aa11.22□□□□□ -0.61
MUC4-201ENST00000308466 ANP32DO95626 131 aa11.22□□□□□ -0.61
MUC4-201ENST00000308466 APRTP07741 180 aa11.22□□□□□ -0.61
MUC4-201ENST00000308466 PTGIRP43119 386 aa11.22□□□□□ -0.61
MUC4-201ENST00000308466 SCTRP47872 440 aa11.22□□□□□ -0.61
MUC4-201ENST00000308466 TAP1Q03518 808 aa11.22□□□□□ -0.61
MUC4-201ENST00000308466 AMHR2Q16671 573 aa11.22□□□□□ -0.61
MUC4-201ENST00000308466 HSDL1Q3SXM5 330 aa11.22□□□□□ -0.61
MUC4-201ENST00000308466 FAM47CQ5HY64 1035 aa11.22□□□□□ -0.61
MUC4-201ENST00000308466 GLRA4Q5JXX5 417 aa11.22□□□□□ -0.61
MUC4-201ENST00000308466 TREML2Q5T2D2 321 aa11.22□□□□□ -0.61
MUC4-201ENST00000308466 CCDC62Q6P9F0 684 aa11.22□□□□□ -0.61
MUC4-201ENST00000308466 MPZL3Q6UWV2 235 aa11.22□□□□□ -0.61
MUC4-201ENST00000308466 WDR49Q8IV35 697 aa11.22□□□□□ -0.61
MUC4-201ENST00000308466 BRSK2Q8IWQ3 736 aa11.22□□□□□ -0.61
MUC4-201ENST00000308466 MTMR14Q8NCE2 650 aa11.22□□□□□ -0.61
MUC4-201ENST00000308466 KLRG1Q96E93 195 aa11.22□□□□□ -0.61
MUC4-201ENST00000308466 FHDC1Q9C0D6 1143 aaPredicted RBP11.22□□□□□ -0.61
MUC4-201ENST00000308466 VPS33BQ9H267 617 aa11.22□□□□□ -0.61
MUC4-201ENST00000308466 SNX25Q9H3E2 840 aa11.22□□□□□ -0.61
MUC4-201ENST00000308466 KIAA1551Q9HCM1 1747 aa11.22□□□□□ -0.61
MUC4-201ENST00000308466 HBP1O60381 514 aa11.22□□□□□ -0.61
MUC4-201ENST00000308466 RFC1P35251 1148 aaPredicted RBP11.22□□□□□ -0.61
MUC4-201ENST00000308466 SP2Q02086 613 aa11.22□□□□□ -0.61
MUC4-201ENST00000308466 TNFAIP2Q03169 654 aa11.22□□□□□ -0.61
MUC4-201ENST00000308466 EXOC3L1Q86VI1 746 aa11.22□□□□□ -0.61
MUC4-201ENST00000308466 ART4Q93070 314 aa11.22□□□□□ -0.61
MUC4-201ENST00000308466 NTPCRQ9BSD7 190 aaKnown RBP11.22□□□□□ -0.61
MUC4-201ENST00000308466 SLC13A1Q9BZW2 595 aa11.22□□□□□ -0.61
MUC4-201ENST00000308466 GPATCH2LQ9NWQ4 482 aa11.22□□□□□ -0.61
MUC4-201ENST00000308466 GRHL1Q9NZI5 618 aa11.22□□□□□ -0.61
MUC4-201ENST00000308466 XPO7Q9UIA9 1087 aaKnown RBP11.22□□□□□ -0.61
MUC4-201ENST00000308466 ARL2BPQ9Y2Y0 163 aa11.22□□□□□ -0.61
MUC4-201ENST00000308466 A8MXQ7 604 aa11.22□□□□□ -0.61
MUC4-201ENST00000308466 KCNN4O15554 427 aa11.22□□□□□ -0.61
MUC4-201ENST00000308466 B4GALT5O43286 388 aa11.22□□□□□ -0.61
MUC4-201ENST00000308466 STK10O94804 968 aaKnown RBP11.22□□□□□ -0.61
MUC4-201ENST00000308466 C4BPAP04003 597 aaKnown RBP11.22□□□□□ -0.61
MUC4-201ENST00000308466 NUDT17P0C025 328 aa11.22□□□□□ -0.61
MUC4-201ENST00000308466 CREB1P16220 341 aa11.22□□□□□ -0.61
MUC4-201ENST00000308466 ROR1Q01973 937 aa11.22□□□□□ -0.61
MUC4-201ENST00000308466 TMEM132DQ14C87 1099 aa11.22□□□□□ -0.61
MUC4-201ENST00000308466 ZC3H12AQ5D1E8 599 aaKnown RBP11.22□□□□□ -0.61
MUC4-201ENST00000308466 ERMARDQ5T6L9 678 aa11.22□□□□□ -0.61
MUC4-201ENST00000308466 C6orf163Q5TEZ5 329 aa11.22□□□□□ -0.61
MUC4-201ENST00000308466 ZDHHC24Q6UX98 284 aa11.22□□□□□ -0.61
MUC4-201ENST00000308466 PCGF5Q86SE9 256 aa11.22□□□□□ -0.61
MUC4-201ENST00000308466 TEKT4Q8WW24 435 aa11.22□□□□□ -0.61
MUC4-201ENST00000308466 LRRC37BQ96QE4 947 aa11.22□□□□□ -0.61
MUC4-201ENST00000308466 APOBEC3GQ9HC16 384 aaKnown RBP11.22□□□□□ -0.61
MUC4-201ENST00000308466 BATF3Q9NR55 127 aa11.22□□□□□ -0.61
MUC4-201ENST00000308466 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.22□□□□□ -0.61
MUC4-201ENST00000308466 COQ4Q9Y3A0 265 aa11.22□□□□□ -0.61
MUC4-201ENST00000308466 RPTORQ8N122 1335 aa11.21□□□□□ -0.61
MUC4-201ENST00000308466 SAT1P21673 171 aa11.21□□□□□ -0.61
MUC4-201ENST00000308466 RASSF2P50749 326 aa11.21□□□□□ -0.61
MUC4-201ENST00000308466 FSTL1Q12841 308 aa11.21□□□□□ -0.61
MUC4-201ENST00000308466 EEF1DP3Q658K8 133 aa11.21□□□□□ -0.61
MUC4-201ENST00000308466 ARHGAP22Q7Z5H3 698 aa11.21□□□□□ -0.61
MUC4-201ENST00000308466 SNRNP27Q8WVK2 155 aaKnown RBP11.21□□□□□ -0.61
MUC4-201ENST00000308466 CAMKK2Q96RR4 588 aa11.21□□□□□ -0.61
MUC4-201ENST00000308466 ERAP1Q9NZ08 941 aa11.21□□□□□ -0.61
MUC4-201ENST00000308466 A0A0B4J269 797 aa11.21□□□□□ -0.61
MUC4-201ENST00000308466 ZNF189O75820 626 aaPredicted RBP11.21□□□□□ -0.61
MUC4-201ENST00000308466 STAG3L1P0CL83 205 aa11.21□□□□□ -0.61
MUC4-201ENST00000308466 SSTR1P30872 391 aa11.21□□□□□ -0.61
MUC4-201ENST00000308466 PDE1BQ01064 536 aa11.21□□□□□ -0.61
MUC4-201ENST00000308466 FAM182AQ5T1J6 154 aa11.21□□□□□ -0.61
MUC4-201ENST00000308466 DENND1BQ6P3S1 775 aa11.21□□□□□ -0.61
MUC4-201ENST00000308466 ZDHHC18Q9NUE0 388 aa11.21□□□□□ -0.61
MUC4-201ENST00000308466 H0Y3Z8 333 aa11.21□□□□□ -0.62
MUC4-201ENST00000308466 UBOX5O94941 541 aa11.21□□□□□ -0.62
MUC4-201ENST00000308466 LCP1P13796 627 aa11.21□□□□□ -0.62
MUC4-201ENST00000308466 INSRRP14616 1297 aa11.21□□□□□ -0.62
MUC4-201ENST00000308466 KRT4P19013 534 aa11.21□□□□□ -0.62
MUC4-201ENST00000308466 GCLCP48506 637 aaPredicted RBP11.21□□□□□ -0.62
MUC4-201ENST00000308466 HIRAP54198 1017 aaPredicted RBP11.21□□□□□ -0.62
MUC4-201ENST00000308466 NR1H3Q13133 447 aa11.21□□□□□ -0.62
MUC4-201ENST00000308466 RCN2Q14257 317 aa11.21□□□□□ -0.62
MUC4-201ENST00000308466 ZPBP2Q6X784 338 aa11.21□□□□□ -0.62
MUC4-201ENST00000308466 TRIM42Q8IWZ5 723 aa11.21□□□□□ -0.62
MUC4-201ENST00000308466 GBP7Q8N8V2 638 aaPredicted RBP11.21□□□□□ -0.62
MUC4-201ENST00000308466 VCPIP1Q96JH7 1222 aa11.21□□□□□ -0.62
MUC4-201ENST00000308466 GBP5Q96PP8 586 aa11.21□□□□□ -0.62
MUC4-201ENST00000308466 ASCC2Q9H1I8 757 aaPredicted RBP11.21□□□□□ -0.62
MUC4-201ENST00000308466 MYH4Q9Y623 1939 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms