RNA–Protein interactions for RNA: ENST00000307340.7

USH2A-201, Transcript of usherin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USH2A, Length 18,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-201ENST00000307340 LRRIQ4A6NIV6 560 aa4.18□□□□□ -1.74
USH2A-201ENST00000307340 SFI1A8K8P3 1242 aa4.18□□□□□ -1.74
USH2A-201ENST00000307340 TRAFD1O14545 582 aaPredicted RBP4.18□□□□□ -1.74
USH2A-201ENST00000307340 RPS6KA4O75676 772 aa4.18□□□□□ -1.74
USH2A-201ENST00000307340 PRKCIP41743 596 aa4.18□□□□□ -1.74
USH2A-201ENST00000307340 ROR1Q01973 937 aa4.18□□□□□ -1.74
USH2A-201ENST00000307340 WASHC2DQ5SRD0 308 aa4.18□□□□□ -1.74
USH2A-201ENST00000307340 BICRALQ6AI39 1079 aa4.18□□□□□ -1.74
USH2A-201ENST00000307340 CAMK1DQ8IU85 385 aa4.18□□□□□ -1.74
USH2A-201ENST00000307340 IL17REQ8NFR9 667 aa4.18□□□□□ -1.74
USH2A-201ENST00000307340 THAP1Q9NVV9 213 aa4.18□□□□□ -1.74
USH2A-201ENST00000307340 SEPT9Q9UHD8 586 aaPredicted RBP4.18□□□□□ -1.74
USH2A-201ENST00000307340 ATAD5Q96QE3 1844 aa4.18□□□□□ -1.74
USH2A-201ENST00000307340 FGF10O15520 208 aaPredicted RBP4.18□□□□□ -1.74
USH2A-201ENST00000307340 CRTAMO95727 393 aa4.18□□□□□ -1.74
USH2A-201ENST00000307340 KRT6AP02538 564 aa4.18□□□□□ -1.74
USH2A-201ENST00000307340 KRT6BP04259 564 aa4.18□□□□□ -1.74
USH2A-201ENST00000307340 MPOP05164 745 aa4.18□□□□□ -1.74
USH2A-201ENST00000307340 H2AFXP16104 143 aaPredicted RBP4.18□□□□□ -1.74
USH2A-201ENST00000307340 YWHABP31946 246 aaKnown RBP4.18□□□□□ -1.74
USH2A-201ENST00000307340 TIMM10P62072 90 aa4.18□□□□□ -1.74
USH2A-201ENST00000307340 C1orf146Q5VVC0 180 aa4.18□□□□□ -1.74
USH2A-201ENST00000307340 LRRC8DQ7L1W4 858 aa4.18□□□□□ -1.74
USH2A-201ENST00000307340 CDH19Q9H159 772 aa4.18□□□□□ -1.74
USH2A-201ENST00000307340 DERAQ9Y315 318 aa4.18□□□□□ -1.74
USH2A-201ENST00000307340 HBP1O60381 514 aa4.18□□□□□ -1.74
USH2A-201ENST00000307340 TCEA2Q15560 299 aa4.18□□□□□ -1.74
USH2A-201ENST00000307340 TTLL6Q8N841 843 aa4.18□□□□□ -1.74
USH2A-201ENST00000307340 PDPRQ8NCN5 879 aa4.18□□□□□ -1.74
USH2A-201ENST00000307340 DNAJC9Q8WXX5 260 aa4.18□□□□□ -1.74
USH2A-201ENST00000307340 PRDM8Q9NQV8 689 aa4.18□□□□□ -1.74
USH2A-201ENST00000307340 TAB2Q9NYJ8 693 aa4.18□□□□□ -1.74
USH2A-201ENST00000307340 KIF17Q9P2E2 1029 aa4.18□□□□□ -1.74
USH2A-201ENST00000307340 PRKAG2Q9UGJ0 569 aa4.18□□□□□ -1.74
USH2A-201ENST00000307340 PCYOX1Q9UHG3 505 aa4.18□□□□□ -1.74
USH2A-201ENST00000307340 PALD1Q9ULE6 856 aa4.18□□□□□ -1.74
USH2A-201ENST00000307340 DCDC2CA8MYV0 355 aa4.18□□□□□ -1.74
USH2A-201ENST00000307340 PSMD12O00232 456 aaPredicted RBP4.18□□□□□ -1.74
USH2A-201ENST00000307340 ERN1O75460 977 aaKnown RBP4.18□□□□□ -1.74
USH2A-201ENST00000307340 BCAT1P54687 386 aa4.18□□□□□ -1.74
USH2A-201ENST00000307340 CORO7P57737 925 aa4.18□□□□□ -1.74
USH2A-201ENST00000307340 PTENP60484 403 aa4.18□□□□□ -1.74
USH2A-201ENST00000307340 FKBP1BP68106 108 aa4.18□□□□□ -1.74
USH2A-201ENST00000307340 ZNF200P98182 395 aaPredicted RBP4.18□□□□□ -1.74
USH2A-201ENST00000307340 RALGPS1Q5JS13 557 aa4.18□□□□□ -1.74
USH2A-201ENST00000307340 PCDH9Q9HC56 1237 aa4.18□□□□□ -1.74
USH2A-201ENST00000307340 RABGEF1Q9UJ41 708 aa4.18□□□□□ -1.74
USH2A-201ENST00000307340 ITGA11Q9UKX5 1188 aa4.18□□□□□ -1.74
USH2A-201ENST00000307340 CENPXA8MT69 81 aa4.18□□□□□ -1.74
USH2A-201ENST00000307340 H7C4K7 107 aa4.18□□□□□ -1.74
USH2A-201ENST00000307340 PAEPP09466 180 aa4.18□□□□□ -1.74
USH2A-201ENST00000307340 PABPC1P11940 636 aaKnown RBP4.18□□□□□ -1.74
USH2A-201ENST00000307340 VPS72Q15906 364 aa4.18□□□□□ -1.74
USH2A-201ENST00000307340 SCARA3Q6AZY7 606 aa4.18□□□□□ -1.74
USH2A-201ENST00000307340 TRIM67Q6ZTA4 783 aa4.18□□□□□ -1.74
USH2A-201ENST00000307340 BTBD6Q96KE9 485 aa4.18□□□□□ -1.74
USH2A-201ENST00000307340 UGT2B28Q9BY64 529 aa4.18□□□□□ -1.74
USH2A-201ENST00000307340 RECQL5O94762 991 aaPredicted RBP4.18□□□□□ -1.74
USH2A-201ENST00000307340 BCAR1P56945 870 aa4.18□□□□□ -1.74
USH2A-201ENST00000307340 C6orf52Q5T4I8 152 aa4.18□□□□□ -1.74
USH2A-201ENST00000307340 FAM102BQ5T8I3 360 aa4.18□□□□□ -1.74
USH2A-201ENST00000307340 IZUMO3Q5VZ72 239 aa4.18□□□□□ -1.74
USH2A-201ENST00000307340 MRPS26Q9BYN8 205 aaKnown RBP4.18□□□□□ -1.74
USH2A-201ENST00000307340 GLP2RO95838 553 aa4.18□□□□□ -1.74
USH2A-201ENST00000307340 SREBF2Q12772 1141 aa4.18□□□□□ -1.74
USH2A-201ENST00000307340 XRCC4Q13426 336 aa4.18□□□□□ -1.74
USH2A-201ENST00000307340 ZC3H12AQ5D1E8 599 aaKnown RBP4.18□□□□□ -1.74
USH2A-201ENST00000307340 UBXN6Q9BZV1 441 aa4.18□□□□□ -1.74
USH2A-201ENST00000307340 LSM7Q9UK45 103 aaKnown RBP4.18□□□□□ -1.74
USH2A-201ENST00000307340 C5P01031 1676 aa4.17□□□□□ -1.74
USH2A-201ENST00000307340 RREB1Q92766 1687 aa4.17□□□□□ -1.74
USH2A-201ENST00000307340 GNA15P30679 374 aa4.17□□□□□ -1.74
USH2A-201ENST00000307340 TALDO1P37837 337 aa4.17□□□□□ -1.74
USH2A-201ENST00000307340 GFPT1Q06210 699 aaPredicted RBP4.17□□□□□ -1.74
USH2A-201ENST00000307340 TMED2Q15363 201 aa4.17□□□□□ -1.74
USH2A-201ENST00000307340 SLFN13Q68D06 897 aa4.17□□□□□ -1.74
USH2A-201ENST00000307340 TOP1MTQ969P6 601 aa4.17□□□□□ -1.74
USH2A-201ENST00000307340 SLITRK1Q96PX8 696 aa4.17□□□□□ -1.74
USH2A-201ENST00000307340 FANCEQ9HB96 536 aa4.17□□□□□ -1.74
USH2A-201ENST00000307340 ADAM28Q9UKQ2 775 aa4.17□□□□□ -1.74
USH2A-201ENST00000307340 C10orf71Q711Q0 1435 aa4.17□□□□□ -1.74
USH2A-201ENST00000307340 SOAT2O75908 522 aa4.17□□□□□ -1.74
USH2A-201ENST00000307340 SUPT20HL2P0C7V6 817 aa4.17□□□□□ -1.74
USH2A-201ENST00000307340 NQO1P15559 274 aaKnown RBP4.17□□□□□ -1.74
USH2A-201ENST00000307340 FMO5P49326 533 aa4.17□□□□□ -1.74
USH2A-201ENST00000307340 PICALMQ13492 652 aa4.17□□□□□ -1.74
USH2A-201ENST00000307340 UAP1Q16222 522 aaPredicted RBP4.17□□□□□ -1.74
USH2A-201ENST00000307340 LUZP2Q86TE4 346 aa4.17□□□□□ -1.74
USH2A-201ENST00000307340 HERC2P3Q9BVR0 1158 aa4.17□□□□□ -1.74
USH2A-201ENST00000307340 FBXO28Q9NVF7 368 aa4.17□□□□□ -1.74
USH2A-201ENST00000307340 GMIPQ9P107 970 aa4.17□□□□□ -1.74
USH2A-201ENST00000307340 RAB14P61106 215 aa4.17□□□□□ -1.74
USH2A-201ENST00000307340 PTK2BQ14289 1009 aa4.17□□□□□ -1.74
USH2A-201ENST00000307340 IFT43Q96FT9 208 aa4.17□□□□□ -1.74
USH2A-201ENST00000307340 MSTO1Q9BUK6 570 aa4.17□□□□□ -1.74
USH2A-201ENST00000307340 COPG2Q9UBF2 871 aa4.17□□□□□ -1.74
USH2A-201ENST00000307340 COL2A1P02458 1487 aaPredicted RBP4.17□□□□□ -1.74
USH2A-201ENST00000307340 ZNF487B1APH4 448 aa4.17□□□□□ -1.74
USH2A-201ENST00000307340 TOP3AQ13472 1001 aaPredicted RBP4.17□□□□□ -1.74
USH2A-201ENST00000307340 U2AF1L4Q8WU68 220 aaKnown RBP4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms