RNA–Protein interactions for RNA: ENST00000305699.15

FANCA-201, Transcript of FA complementation group A, humanhuman

TSL 2

Gene FANCA, Length 1,430 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-201ENST00000305699 CST3P01034 146 aaPredicted RBP16.7■□□□□ 0.26
FANCA-201ENST00000305699 F11P03951 625 aa16.7■□□□□ 0.26
FANCA-201ENST00000305699 WARSP23381 471 aaKnown RBP16.7■□□□□ 0.26
FANCA-201ENST00000305699 CCNE1P24864 410 aa16.7■□□□□ 0.26
FANCA-201ENST00000305699 LMO2P25791 158 aa16.7■□□□□ 0.26
FANCA-201ENST00000305699 AVPR1AP37288 418 aa16.7■□□□□ 0.26
FANCA-201ENST00000305699 RPS9P46781 194 aaKnown RBP16.7■□□□□ 0.26
FANCA-201ENST00000305699 BIRC3Q13489 604 aa16.7■□□□□ 0.26
FANCA-201ENST00000305699 WDR72Q3MJ13 1102 aa16.7■□□□□ 0.26
FANCA-201ENST00000305699 CFAP221Q4G0U5 840 aa16.7■□□□□ 0.26
FANCA-201ENST00000305699 CMTM8Q8IZV2 173 aa16.7■□□□□ 0.26
FANCA-201ENST00000305699 KIAA0895Q8NCT3 520 aa16.7■□□□□ 0.26
FANCA-201ENST00000305699 TTC8Q8TAM2 541 aa16.7■□□□□ 0.26
FANCA-201ENST00000305699 BPIFB1Q8TDL5 484 aa16.7■□□□□ 0.26
FANCA-201ENST00000305699 MRPS31Q92665 395 aaKnown RBP16.7■□□□□ 0.26
FANCA-201ENST00000305699 MYLPFQ96A32 169 aa16.7■□□□□ 0.26
FANCA-201ENST00000305699 CCDC47Q96A33 483 aaKnown RBP16.7■□□□□ 0.26
FANCA-201ENST00000305699 FUBP3Q96I24 572 aaKnown RBP eCLIP16.7■□□□□ 0.26
FANCA-201ENST00000305699 LRRC3BQ96PB8 259 aa16.7■□□□□ 0.26
FANCA-201ENST00000305699 SCAND2PQ9GZW5 306 aaPredicted RBP16.7■□□□□ 0.26
FANCA-201ENST00000305699 SNX25Q9H3E2 840 aa16.7■□□□□ 0.26
FANCA-201ENST00000305699 THG1LQ9NWX6 298 aaKnown RBP16.7■□□□□ 0.26
FANCA-201ENST00000305699 MAGEC2Q9UBF1 373 aaPredicted RBP16.7■□□□□ 0.26
FANCA-201ENST00000305699 UXTQ9UBK9 157 aaPredicted RBP16.7■□□□□ 0.26
FANCA-201ENST00000305699 ZMYM5Q9UJ78 669 aa16.7■□□□□ 0.26
FANCA-201ENST00000305699 HPSEQ9Y251 543 aa16.7■□□□□ 0.26
FANCA-201ENST00000305699 FAM186AA6NE01 2351 aa16.7■□□□□ 0.26
FANCA-201ENST00000305699 ZNF638Q14966 1978 aaKnown RBP16.7■□□□□ 0.26
FANCA-201ENST00000305699 MYL1P05976 194 aa16.7■□□□□ 0.26
FANCA-201ENST00000305699 DDX6P26196 483 aaKnown RBP eCLIP16.7■□□□□ 0.26
FANCA-201ENST00000305699 WEE1P30291 646 aa16.7■□□□□ 0.26
FANCA-201ENST00000305699 SOX9P48436 509 aa16.7■□□□□ 0.26
FANCA-201ENST00000305699 CASP4P49662 377 aa16.7■□□□□ 0.26
FANCA-201ENST00000305699 NDUFA8P51970 172 aa16.7■□□□□ 0.26
FANCA-201ENST00000305699 CYP27A1Q02318 531 aa16.7■□□□□ 0.26
FANCA-201ENST00000305699 CSTF1Q05048 431 aaKnown RBP16.7■□□□□ 0.26
FANCA-201ENST00000305699 MAPRE1Q15691 268 aaKnown RBP16.7■□□□□ 0.26
FANCA-201ENST00000305699 TXNDC8Q6A555 127 aa16.7■□□□□ 0.26
FANCA-201ENST00000305699 FAM171BQ6P995 826 aa16.7■□□□□ 0.26
FANCA-201ENST00000305699 LIMS2Q7Z4I7 341 aa16.7■□□□□ 0.26
FANCA-201ENST00000305699 TMEM150AQ86TG1 271 aa16.7■□□□□ 0.26
FANCA-201ENST00000305699 MAML2Q8IZL2 1156 aaPredicted RBP16.7■□□□□ 0.26
FANCA-201ENST00000305699 CELF5Q8N6W0 485 aaKnown RBP16.7■□□□□ 0.26
FANCA-201ENST00000305699 FSIP1Q8NA03 581 aa16.7■□□□□ 0.26
FANCA-201ENST00000305699 OR6B3Q8NGW1 331 aa16.7■□□□□ 0.26
FANCA-201ENST00000305699 MRPL45Q9BRJ2 306 aaKnown RBP16.7■□□□□ 0.26
FANCA-201ENST00000305699 CRTAC1Q9NQ79 661 aa16.7■□□□□ 0.26
FANCA-201ENST00000305699 FBXO4Q9UKT5 387 aa16.7■□□□□ 0.26
FANCA-201ENST00000305699 DENND4CQ5VZ89 1909 aa16.69■□□□□ 0.26
FANCA-201ENST00000305699 RPN1P04843 607 aaKnown RBP16.69■□□□□ 0.26
FANCA-201ENST00000305699 GNL1P36915 607 aaPredicted RBP16.69■□□□□ 0.26
FANCA-201ENST00000305699 MYL6P60660 151 aa16.69■□□□□ 0.26
FANCA-201ENST00000305699 PLCB2Q00722 1185 aa16.69■□□□□ 0.26
FANCA-201ENST00000305699 FZD5Q13467 585 aa16.69■□□□□ 0.26
FANCA-201ENST00000305699 ZNF516Q92618 1163 aa16.69■□□□□ 0.26
FANCA-201ENST00000305699 SEMA4AQ9H3S1 761 aa16.69■□□□□ 0.26
FANCA-201ENST00000305699 C8orf33Q9H7E9 229 aaPredicted RBP16.69■□□□□ 0.26
FANCA-201ENST00000305699 LMAN1LQ9HAT1 526 aa16.69■□□□□ 0.26
FANCA-201ENST00000305699 TRPC7Q9HCX4 862 aa16.69■□□□□ 0.26
FANCA-201ENST00000305699 GTSE1Q9NYZ3 720 aa16.69■□□□□ 0.26
FANCA-201ENST00000305699 NXF1Q9UBU9 619 aaKnown RBP16.69■□□□□ 0.26
FANCA-201ENST00000305699 NOL4O94818 638 aa16.68■□□□□ 0.26
FANCA-201ENST00000305699 LMNAP02545 664 aaKnown RBP16.68■□□□□ 0.26
FANCA-201ENST00000305699 NR3C1P04150 777 aa16.68■□□□□ 0.26
FANCA-201ENST00000305699 BDNFP23560 247 aa16.68■□□□□ 0.26
FANCA-201ENST00000305699 ANXA13P27216 316 aa16.68■□□□□ 0.26
FANCA-201ENST00000305699 GRIK1P39086 918 aa16.68■□□□□ 0.26
FANCA-201ENST00000305699 MAGEA11P43364 429 aa16.68■□□□□ 0.26
FANCA-201ENST00000305699 TNK2Q07912 1038 aa16.68■□□□□ 0.26
FANCA-201ENST00000305699 MTAPQ13126 283 aa16.68■□□□□ 0.26
FANCA-201ENST00000305699 MDH1BQ5I0G3 518 aa16.68■□□□□ 0.26
FANCA-201ENST00000305699 C1orf228Q6PIY5 440 aa16.68■□□□□ 0.26
FANCA-201ENST00000305699 MON1AQ86VX9 555 aa16.68■□□□□ 0.26
FANCA-201ENST00000305699 ADSSL1Q8N142 457 aa16.68■□□□□ 0.26
FANCA-201ENST00000305699 TTC16Q8NEE8 873 aa16.68■□□□□ 0.26
FANCA-201ENST00000305699 PLEKHO2Q8TD55 490 aa16.68■□□□□ 0.26
FANCA-201ENST00000305699 SYAP1Q96A49 352 aaPredicted RBP16.68■□□□□ 0.26
FANCA-201ENST00000305699 TRMT2BQ96GJ1 504 aaKnown RBP16.68■□□□□ 0.26
FANCA-201ENST00000305699 MSANTD3Q96H12 275 aa16.68■□□□□ 0.26
FANCA-201ENST00000305699 GZF1Q9H116 711 aaPredicted RBP16.68■□□□□ 0.26
FANCA-201ENST00000305699 CCL26Q9Y258 94 aa16.68■□□□□ 0.26
FANCA-201ENST00000305699 OBSL1O75147 1896 aa16.68■□□□□ 0.26
FANCA-201ENST00000305699 LRRIQ3A6PVS8 624 aaPredicted RBP16.67■□□□□ 0.26
FANCA-201ENST00000305699 SPECC1L-ADORA2AF8WAN1 911 aa16.67■□□□□ 0.26
FANCA-201ENST00000305699 PDXKO00764 312 aa16.67■□□□□ 0.26
FANCA-201ENST00000305699 TACC1O75410 805 aa16.67■□□□□ 0.26
FANCA-201ENST00000305699 KIF20AO95235 890 aa16.67■□□□□ 0.26
FANCA-201ENST00000305699 ATICP31939 592 aa16.67■□□□□ 0.26
FANCA-201ENST00000305699 AP3M2P53677 418 aa16.67■□□□□ 0.26
FANCA-201ENST00000305699 MLLT6P55198 1093 aaPredicted RBP16.67■□□□□ 0.26
FANCA-201ENST00000305699 BECN1Q14457 450 aa16.67■□□□□ 0.26
FANCA-201ENST00000305699 ZNF528Q3MIS6 628 aa16.67■□□□□ 0.26
FANCA-201ENST00000305699 VSTM1Q6UX27 236 aa16.67■□□□□ 0.26
FANCA-201ENST00000305699 ZNF687Q8N1G0 1237 aa16.67■□□□□ 0.26
FANCA-201ENST00000305699 MYCBPAPQ8TBZ2 947 aa16.67■□□□□ 0.26
FANCA-201ENST00000305699 PARD3BQ8TEW8 1205 aa16.67■□□□□ 0.26
FANCA-201ENST00000305699 USP13Q92995 863 aaPredicted RBP16.67■□□□□ 0.26
FANCA-201ENST00000305699 CHRDQ9H2X0 955 aa16.67■□□□□ 0.26
FANCA-201ENST00000305699 KCTD10Q9H3F6 313 aa16.67■□□□□ 0.26
FANCA-201ENST00000305699 GDPD2Q9HCC8 539 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms