RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 VSTM1Q6UX27 236 aa28.25■■■□□ 2.11
CDKN2A-201ENST00000304494 INTS8Q75QN2 995 aaKnown RBP28.25■■■□□ 2.11
CDKN2A-201ENST00000304494 YAF2Q8IY57 180 aa28.25■■■□□ 2.11
CDKN2A-201ENST00000304494 DTWD2Q8NBA8 298 aa28.25■■■□□ 2.11
CDKN2A-201ENST00000304494 MYLPFQ96A32 169 aa28.25■■■□□ 2.11
CDKN2A-201ENST00000304494 TIGD1Q96MW7 591 aa28.25■■■□□ 2.11
CDKN2A-201ENST00000304494 DDX23Q9BUQ8 820 aaKnown RBP28.25■■■□□ 2.11
CDKN2A-201ENST00000304494 CRTAC1Q9NQ79 661 aa28.25■■■□□ 2.11
CDKN2A-201ENST00000304494 MAGED2Q9UNF1 606 aaPredicted RBP28.25■■■□□ 2.11
CDKN2A-201ENST00000304494 ZNF263O14978 683 aa28.24■■■□□ 2.11
CDKN2A-201ENST00000304494 DDX6P26196 483 aaKnown RBP eCLIP28.24■■■□□ 2.11
CDKN2A-201ENST00000304494 VAMP7P51809 220 aa28.24■■■□□ 2.11
CDKN2A-201ENST00000304494 NLRP12P59046 1061 aa28.24■■■□□ 2.11
CDKN2A-201ENST00000304494 CYP27A1Q02318 531 aa28.24■■■□□ 2.11
CDKN2A-201ENST00000304494 CCDC142Q17RM4 750 aa28.24■■■□□ 2.11
CDKN2A-201ENST00000304494 ZACNQ401N2 412 aa28.24■■■□□ 2.11
CDKN2A-201ENST00000304494 ZNF667Q5HYK9 610 aa28.24■■■□□ 2.11
CDKN2A-201ENST00000304494 MYCBPAPQ8TBZ2 947 aa28.24■■■□□ 2.11
CDKN2A-201ENST00000304494 TRMT2BQ96GJ1 504 aaKnown RBP28.24■■■□□ 2.11
CDKN2A-201ENST00000304494 CEP295NLQ96MC4 621 aa28.24■■■□□ 2.11
CDKN2A-201ENST00000304494 GTPBP4Q9BZE4 634 aaKnown RBP28.24■■■□□ 2.11
CDKN2A-201ENST00000304494 OBP2AQ9NY56 170 aa28.24■■■□□ 2.11
CDKN2A-201ENST00000304494 CIZ1Q9ULV3 898 aaPredicted RBP28.24■■■□□ 2.11
CDKN2A-201ENST00000304494 SOBPA7XYQ1 873 aa28.23■■■□□ 2.11
CDKN2A-201ENST00000304494 H0Y858 1186 aa28.23■■■□□ 2.11
CDKN2A-201ENST00000304494 NOL4O94818 638 aa28.23■■■□□ 2.11
CDKN2A-201ENST00000304494 F11P03951 625 aa28.23■■■□□ 2.11
CDKN2A-201ENST00000304494 KRT13P13646 458 aa28.23■■■□□ 2.11
CDKN2A-201ENST00000304494 P4HA1P13674 534 aa28.23■■■□□ 2.11
CDKN2A-201ENST00000304494 PSMC2P35998 433 aaKnown RBP28.23■■■□□ 2.11
CDKN2A-201ENST00000304494 ENPEPQ07075 957 aa28.23■■■□□ 2.11
CDKN2A-201ENST00000304494 ADAM9Q13443 819 aa28.23■■■□□ 2.11
CDKN2A-201ENST00000304494 SGSM1Q2NKQ1 1148 aa28.23■■■□□ 2.11
CDKN2A-201ENST00000304494 EDRF1Q3B7T1 1238 aa28.23■■■□□ 2.11
CDKN2A-201ENST00000304494 SDHAF4Q5VUM1 108 aa28.23■■■□□ 2.11
CDKN2A-201ENST00000304494 TPRG1Q6ZUI0 275 aa28.23■■■□□ 2.11
CDKN2A-201ENST00000304494 SCN4BQ8IWT1 228 aa28.23■■■□□ 2.11
CDKN2A-201ENST00000304494 FAM186BQ8IYM0 893 aa28.23■■■□□ 2.11
CDKN2A-201ENST00000304494 TAF4BQ92750 862 aa28.23■■■□□ 2.11
CDKN2A-201ENST00000304494 ATOH1Q92858 354 aaPredicted RBP28.23■■■□□ 2.11
CDKN2A-201ENST00000304494 FOXQ1Q9C009 403 aa28.23■■■□□ 2.11
CDKN2A-201ENST00000304494 HEBP1Q9NRV9 189 aa28.23■■■□□ 2.11
CDKN2A-201ENST00000304494 SLC38A8A6NNN8 435 aa28.22■■■□□ 2.11
CDKN2A-201ENST00000304494 A8MXQ7 604 aa28.22■■■□□ 2.11
CDKN2A-201ENST00000304494 AKAP3O75969 853 aa28.22■■■□□ 2.11
CDKN2A-201ENST00000304494 VNN1O95497 513 aa28.22■■■□□ 2.11
CDKN2A-201ENST00000304494 HOXD11P31277 338 aaPredicted RBP28.22■■■□□ 2.11
CDKN2A-201ENST00000304494 FCHO2Q0JRZ9 810 aa28.22■■■□□ 2.11
CDKN2A-201ENST00000304494 ZCWPW2Q504Y3 356 aa28.22■■■□□ 2.11
CDKN2A-201ENST00000304494 MDH1BQ5I0G3 518 aa28.22■■■□□ 2.11
CDKN2A-201ENST00000304494 ZNF658Q5TYW1 1059 aaPredicted RBP28.22■■■□□ 2.11
CDKN2A-201ENST00000304494 ZNF852Q6ZMS4 543 aa28.22■■■□□ 2.11
CDKN2A-201ENST00000304494 SV2AQ7L0J3 742 aa28.22■■■□□ 2.11
CDKN2A-201ENST00000304494 SMYD4Q8IYR2 804 aaPredicted RBP28.22■■■□□ 2.11
CDKN2A-201ENST00000304494 MRPS31Q92665 395 aaKnown RBP28.22■■■□□ 2.11
CDKN2A-201ENST00000304494 PCED1BQ96HM7 432 aa28.22■■■□□ 2.11
CDKN2A-201ENST00000304494 MYRFLQ96LU7 910 aa28.22■■■□□ 2.11
CDKN2A-201ENST00000304494 NELL2Q99435 816 aa28.22■■■□□ 2.11
CDKN2A-201ENST00000304494 OSBPL6Q9BZF3 934 aa28.22■■■□□ 2.11
CDKN2A-201ENST00000304494 MRPS17Q9Y2R5 130 aaKnown RBP28.22■■■□□ 2.11
CDKN2A-201ENST00000304494 NCANO14594 1321 aa28.21■■■□□ 2.11
CDKN2A-201ENST00000304494 CHADO15335 359 aa28.21■■■□□ 2.11
CDKN2A-201ENST00000304494 DCNP07585 359 aaKnown RBP28.21■■■□□ 2.11
CDKN2A-201ENST00000304494 PTPN1P18031 435 aaKnown RBP28.21■■■□□ 2.11
CDKN2A-201ENST00000304494 UBXN2BQ14CS0 331 aa28.21■■■□□ 2.11
CDKN2A-201ENST00000304494 TMEM150AQ86TG1 271 aa28.21■■■□□ 2.11
CDKN2A-201ENST00000304494 SPATA20Q8TB22 786 aa28.21■■■□□ 2.11
CDKN2A-201ENST00000304494 SMARCE1Q969G3 411 aa28.21■■■□□ 2.11
CDKN2A-201ENST00000304494 RSPRY1Q96DX4 576 aa28.21■■■□□ 2.11
CDKN2A-201ENST00000304494 SPATA17Q96L03 361 aa28.21■■■□□ 2.11
CDKN2A-201ENST00000304494 SLC46A2Q9BY10 475 aa28.21■■■□□ 2.11
CDKN2A-201ENST00000304494 MAN2B1O00754 1011 aa28.2■■■□□ 2.1
CDKN2A-201ENST00000304494 TRIM66O15016 1216 aa28.2■■■□□ 2.1
CDKN2A-201ENST00000304494 BDNFP23560 247 aa28.2■■■□□ 2.1
CDKN2A-201ENST00000304494 ANXA13P27216 316 aa28.2■■■□□ 2.1
CDKN2A-201ENST00000304494 AVPR1AP37288 418 aa28.2■■■□□ 2.1
CDKN2A-201ENST00000304494 GRIK1P39086 918 aa28.2■■■□□ 2.1
CDKN2A-201ENST00000304494 COBLL1Q53SF7 1204 aa28.2■■■□□ 2.1
CDKN2A-201ENST00000304494 B3GALNT2Q8NCR0 500 aa28.2■■■□□ 2.1
CDKN2A-201ENST00000304494 STKLD1Q8NE28 680 aa28.2■■■□□ 2.1
CDKN2A-201ENST00000304494 SMYD3Q9H7B4 428 aa28.2■■■□□ 2.1
CDKN2A-201ENST00000304494 LTB4R2Q9NPC1 389 aa28.2■■■□□ 2.1
CDKN2A-201ENST00000304494 DLGAP2Q9P1A6 1054 aa28.2■■■□□ 2.1
CDKN2A-201ENST00000304494 NME7Q9Y5B8 376 aa28.2■■■□□ 2.1
CDKN2A-201ENST00000304494 NUP210Q8TEM1 1887 aaPredicted RBP28.19■■■□□ 2.1
CDKN2A-201ENST00000304494 FAM170BA6NMN3 283 aa28.19■■■□□ 2.1
CDKN2A-201ENST00000304494 PIK3CAP42336 1068 aa28.19■■■□□ 2.1
CDKN2A-201ENST00000304494 C1orf220Q5T0J3 134 aa28.19■■■□□ 2.1
CDKN2A-201ENST00000304494 ELOA2Q8IYF1 753 aaPredicted RBP28.19■■■□□ 2.1
CDKN2A-201ENST00000304494 CMTM8Q8IZV2 173 aa28.19■■■□□ 2.1
CDKN2A-201ENST00000304494 CELF5Q8N6W0 485 aaKnown RBP28.19■■■□□ 2.1
CDKN2A-201ENST00000304494 CSGALNACT1Q8TDX6 532 aa28.19■■■□□ 2.1
CDKN2A-201ENST00000304494 BCO2Q9BYV7 579 aa28.19■■■□□ 2.1
CDKN2A-201ENST00000304494 DPEP3Q9H4B8 488 aa28.19■■■□□ 2.1
CDKN2A-201ENST00000304494 EHD2Q9NZN4 543 aa28.19■■■□□ 2.1
CDKN2A-201ENST00000304494 PCDHA5Q9Y5H7 936 aa28.19■■■□□ 2.1
CDKN2A-201ENST00000304494 NCAM2O15394 837 aa28.18■■■□□ 2.1
CDKN2A-201ENST00000304494 KINO60870 393 aaKnown RBP28.18■■■□□ 2.1
CDKN2A-201ENST00000304494 PRAMEF12O95522 483 aa28.18■■■□□ 2.1
CDKN2A-201ENST00000304494 GLULP15104 373 aa28.18■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms