RNA–Protein interactions for RNA: ENST00000304060.9

ZNF440-201, Transcript of zinc finger protein 440, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF440, Length 4,189 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440-201ENST00000304060 CEP295NLQ96MC4 621 aa6.27□□□□□ -1.41
ZNF440-201ENST00000304060 TMEM134Q9H6X4 195 aa6.27□□□□□ -1.41
ZNF440-201ENST00000304060 HOOK1Q9UJC3 728 aaKnown RBP6.27□□□□□ -1.41
ZNF440-201ENST00000304060 SDK1Q7Z5N4 2213 aa6.27□□□□□ -1.41
ZNF440-201ENST00000304060 SMIM28A0A1B0GU29 152 aa6.27□□□□□ -1.41
ZNF440-201ENST00000304060 PAPLNO95428 1278 aa6.27□□□□□ -1.41
ZNF440-201ENST00000304060 GLRA2P23416 452 aa6.27□□□□□ -1.41
ZNF440-201ENST00000304060 ARL2P36404 184 aa6.27□□□□□ -1.41
ZNF440-201ENST00000304060 GRIA2P42262 883 aa6.27□□□□□ -1.41
ZNF440-201ENST00000304060 ZSCAN23Q3MJ62 389 aa6.27□□□□□ -1.41
ZNF440-201ENST00000304060 ZC3H12AQ5D1E8 599 aaKnown RBP6.27□□□□□ -1.41
ZNF440-201ENST00000304060 TDRD10Q5VZ19 366 aaKnown RBP6.27□□□□□ -1.41
ZNF440-201ENST00000304060 XKR5Q6UX68 686 aa6.27□□□□□ -1.41
ZNF440-201ENST00000304060 GPR155Q7Z3F1 870 aa6.27□□□□□ -1.41
ZNF440-201ENST00000304060 RASEFQ8IZ41 740 aa6.27□□□□□ -1.41
ZNF440-201ENST00000304060 SHKBP1Q8TBC3 707 aa6.27□□□□□ -1.41
ZNF440-201ENST00000304060 RNF217Q8TC41 542 aa6.27□□□□□ -1.41
ZNF440-201ENST00000304060 HNRNPLLQ8WVV9 542 aaKnown RBP6.27□□□□□ -1.41
ZNF440-201ENST00000304060 PSMG2Q969U7 264 aa6.27□□□□□ -1.41
ZNF440-201ENST00000304060 SH2D3AQ9BRG2 576 aa6.27□□□□□ -1.41
ZNF440-201ENST00000304060 RNF39Q9H2S5 420 aa6.27□□□□□ -1.41
ZNF440-201ENST00000304060 GPRC5CQ9NQ84 441 aa6.27□□□□□ -1.41
ZNF440-201ENST00000304060 LRWD1Q9UFC0 647 aa6.27□□□□□ -1.41
ZNF440-201ENST00000304060 MIA3Q5JRA6 1907 aa6.27□□□□□ -1.41
ZNF440-201ENST00000304060 TYW5A2RUC4 315 aaKnown RBP6.27□□□□□ -1.41
ZNF440-201ENST00000304060 FAM205CA6NFA0 338 aa6.27□□□□□ -1.41
ZNF440-201ENST00000304060 ARHGAP33O14559 1287 aa6.27□□□□□ -1.41
ZNF440-201ENST00000304060 RNASEH1O60930 286 aaKnown RBP6.27□□□□□ -1.41
ZNF440-201ENST00000304060 TOM1L1O75674 476 aa6.27□□□□□ -1.41
ZNF440-201ENST00000304060 TNNC2P02585 160 aa6.27□□□□□ -1.41
ZNF440-201ENST00000304060 HLA-EP13747 358 aa6.27□□□□□ -1.41
ZNF440-201ENST00000304060 ABCB4P21439 1286 aa6.27□□□□□ -1.41
ZNF440-201ENST00000304060 HOXA11P31270 313 aaPredicted RBP6.27□□□□□ -1.41
ZNF440-201ENST00000304060 EIF2DP41214 584 aaKnown RBP6.27□□□□□ -1.41
ZNF440-201ENST00000304060 RAP1GAPP47736 663 aa6.27□□□□□ -1.41
ZNF440-201ENST00000304060 GTF2A1P52655 376 aaPredicted RBP6.27□□□□□ -1.41
ZNF440-201ENST00000304060 EPHA5P54756 1037 aa6.27□□□□□ -1.41
ZNF440-201ENST00000304060 SRSF5Q13243 272 aaKnown RBP6.27□□□□□ -1.41
ZNF440-201ENST00000304060 CMTM8Q8IZV2 173 aa6.27□□□□□ -1.41
ZNF440-201ENST00000304060 TMEM86AQ8N2M4 240 aa6.27□□□□□ -1.41
ZNF440-201ENST00000304060 CHCHD4Q8N4Q1 142 aa6.27□□□□□ -1.41
ZNF440-201ENST00000304060 OXR1Q8N573 874 aa6.27□□□□□ -1.41
ZNF440-201ENST00000304060 ST13P5Q8NFI4 369 aaPredicted RBP6.27□□□□□ -1.41
ZNF440-201ENST00000304060 ADAMTS14Q8WXS8 1223 aa6.27□□□□□ -1.41
ZNF440-201ENST00000304060 SNX19Q92543 992 aa6.27□□□□□ -1.41
ZNF440-201ENST00000304060 VN1R3Q9BXE9 311 aa6.27□□□□□ -1.41
ZNF440-201ENST00000304060 SNX25Q9H3E2 840 aa6.27□□□□□ -1.41
ZNF440-201ENST00000304060 FZD8Q9H461 694 aa6.27□□□□□ -1.41
ZNF440-201ENST00000304060 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.27□□□□□ -1.41
ZNF440-201ENST00000304060 SPAARA0A1B0GVQ0 90 aa6.26□□□□□ -1.41
ZNF440-201ENST00000304060 HNRNPDLO14979 420 aaKnown RBP6.26□□□□□ -1.41
ZNF440-201ENST00000304060 EXTL3O43909 919 aa6.26□□□□□ -1.41
ZNF440-201ENST00000304060 U2AF2P26368 475 aaKnown RBP eCLIP6.26□□□□□ -1.41
ZNF440-201ENST00000304060 GRK6P43250 576 aa6.26□□□□□ -1.41
ZNF440-201ENST00000304060 CLCNKBP51801 687 aa6.26□□□□□ -1.41
ZNF440-201ENST00000304060 COL28A1Q2UY09 1125 aa6.26□□□□□ -1.41
ZNF440-201ENST00000304060 TMEM196Q5HYL7 178 aa6.26□□□□□ -1.41
ZNF440-201ENST00000304060 ZPBP2Q6X784 338 aa6.26□□□□□ -1.41
ZNF440-201ENST00000304060 MINDY1Q8N5J2 469 aa6.26□□□□□ -1.41
ZNF440-201ENST00000304060 MAB21L3Q8N8X9 362 aa6.26□□□□□ -1.41
ZNF440-201ENST00000304060 KIAA1524Q8TCG1 905 aa6.26□□□□□ -1.41
ZNF440-201ENST00000304060 ZNF274Q96GC6 653 aaPredicted RBP6.26□□□□□ -1.41
ZNF440-201ENST00000304060 PGLYRP2Q96PD5 576 aa6.26□□□□□ -1.41
ZNF440-201ENST00000304060 POLR3CQ9BUI4 534 aaPredicted RBP6.26□□□□□ -1.41
ZNF440-201ENST00000304060 SRRTQ9BXP5 876 aaKnown RBP6.26□□□□□ -1.41
ZNF440-201ENST00000304060 TPSD1Q9BZJ3 242 aa6.26□□□□□ -1.41
ZNF440-201ENST00000304060 DUSP15Q9H1R2 295 aaPredicted RBP6.26□□□□□ -1.41
ZNF440-201ENST00000304060 LMBRD1Q9NUN5 540 aa6.26□□□□□ -1.41
ZNF440-201ENST00000304060 TELO2Q9Y4R8 837 aa6.26□□□□□ -1.41
ZNF440-201ENST00000304060 TEX51A0A1B0GUA7 166 aa6.26□□□□□ -1.41
ZNF440-201ENST00000304060 GOLGA8CPA6NN73 597 aa6.26□□□□□ -1.41
ZNF440-201ENST00000304060 IL18RAPO95256 599 aa6.26□□□□□ -1.41
ZNF440-201ENST00000304060 KLF8O95600 359 aaPredicted RBP6.26□□□□□ -1.41
ZNF440-201ENST00000304060 LDHAP00338 332 aaKnown RBP6.26□□□□□ -1.41
ZNF440-201ENST00000304060 P4HA1P13674 534 aa6.26□□□□□ -1.41
ZNF440-201ENST00000304060 KCNE1P15382 129 aa6.26□□□□□ -1.41
ZNF440-201ENST00000304060 LHX1P48742 406 aa6.26□□□□□ -1.41
ZNF440-201ENST00000304060 RARRES1P49788 294 aa6.26□□□□□ -1.41
ZNF440-201ENST00000304060 SLC8A3P57103 927 aa6.26□□□□□ -1.41
ZNF440-201ENST00000304060 TMEM132DQ14C87 1099 aa6.26□□□□□ -1.41
ZNF440-201ENST00000304060 RABEP1Q15276 862 aa6.26□□□□□ -1.41
ZNF440-201ENST00000304060 MAP9Q49MG5 647 aa6.26□□□□□ -1.41
ZNF440-201ENST00000304060 CDR2LQ86X02 465 aaPredicted RBP6.26□□□□□ -1.41
ZNF440-201ENST00000304060 TXLNBQ8N3L3 684 aa6.26□□□□□ -1.41
ZNF440-201ENST00000304060 ZSCAN1Q8NBB4 408 aa6.26□□□□□ -1.41
ZNF440-201ENST00000304060 CCDC150Q8NCX0 1101 aa6.26□□□□□ -1.41
ZNF440-201ENST00000304060 ASAP3Q8TDY4 903 aa6.26□□□□□ -1.41
ZNF440-201ENST00000304060 RABGGTAQ92696 567 aa6.26□□□□□ -1.41
ZNF440-201ENST00000304060 PDZD7Q9H5P4 517 aa6.26□□□□□ -1.41
ZNF440-201ENST00000304060 RGL1Q9NZL6 768 aa6.26□□□□□ -1.41
ZNF440-201ENST00000304060 SMC3Q9UQE7 1217 aa6.26□□□□□ -1.41
ZNF440-201ENST00000304060 V9GYY5 206 aaPredicted RBP6.26□□□□□ -1.41
ZNF440-201ENST00000304060 STK36Q9NRP7 1315 aa6.26□□□□□ -1.41
ZNF440-201ENST00000304060 MEIS3P2A8K0S8 358 aa6.26□□□□□ -1.41
ZNF440-201ENST00000304060 SMTNL1A8MU46 457 aa6.26□□□□□ -1.41
ZNF440-201ENST00000304060 EPB41L2O43491 1005 aaKnown RBP6.26□□□□□ -1.41
ZNF440-201ENST00000304060 MBL2P11226 248 aaPredicted RBP6.26□□□□□ -1.41
ZNF440-201ENST00000304060 TNFRSF4P43489 277 aa6.26□□□□□ -1.41
ZNF440-201ENST00000304060 ARRB1P49407 418 aaPredicted RBP6.26□□□□□ -1.41
ZNF440-201ENST00000304060 CCT8P50990 548 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms