RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 LRRC8BQ6P9F7 803 aa14.5□□□□□ -0.09
PRKCB-201ENST00000303531 BTNL9Q6UXG8 535 aa14.5□□□□□ -0.09
PRKCB-201ENST00000303531 DENND5BQ6ZUT9 1274 aa14.5□□□□□ -0.09
PRKCB-201ENST00000303531 FKBP9P1Q75LS8 142 aa14.5□□□□□ -0.09
PRKCB-201ENST00000303531 FBXO36Q8NEA4 188 aa14.5□□□□□ -0.09
PRKCB-201ENST00000303531 ZMAT2Q96NC0 199 aaKnown RBP14.5□□□□□ -0.09
PRKCB-201ENST00000303531 SHCBP1LQ9BZQ2 653 aa14.5□□□□□ -0.09
PRKCB-201ENST00000303531 TMBIM4Q9HC24 238 aa14.5□□□□□ -0.09
PRKCB-201ENST00000303531 GID8Q9NWU2 228 aa14.5□□□□□ -0.09
PRKCB-201ENST00000303531 DPP3Q9NY33 737 aa14.5□□□□□ -0.09
PRKCB-201ENST00000303531 PCDHB8Q9UN66 801 aa14.5□□□□□ -0.09
PRKCB-201ENST00000303531 ENO4A6NNW6 628 aa14.49□□□□□ -0.09
PRKCB-201ENST00000303531 HNRNPH1P31943 449 aaKnown RBP14.49□□□□□ -0.09
PRKCB-201ENST00000303531 KCNK10P57789 538 aa14.49□□□□□ -0.09
PRKCB-201ENST00000303531 VPS72Q15906 364 aa14.49□□□□□ -0.09
PRKCB-201ENST00000303531 AMHR2Q16671 573 aa14.49□□□□□ -0.09
PRKCB-201ENST00000303531 MGAT5BQ3V5L5 792 aa14.49□□□□□ -0.09
PRKCB-201ENST00000303531 KCNT1Q5JUK3 1230 aa14.49□□□□□ -0.09
PRKCB-201ENST00000303531 MTMR12Q9C0I1 747 aa14.49□□□□□ -0.09
PRKCB-201ENST00000303531 EPHB2P29323 1055 aa14.49□□□□□ -0.09
PRKCB-201ENST00000303531 PKN3Q6P5Z2 889 aa14.49□□□□□ -0.09
PRKCB-201ENST00000303531 SGF29Q96ES7 293 aa14.49□□□□□ -0.09
PRKCB-201ENST00000303531 C17orf80Q9BSJ5 609 aa14.49□□□□□ -0.09
PRKCB-201ENST00000303531 FUCA2Q9BTY2 467 aa14.49□□□□□ -0.09
PRKCB-201ENST00000303531 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.49□□□□□ -0.097e-6■■□□□ 11.6
PRKCB-201ENST00000303531 CDV3Q9UKY7 258 aaKnown RBP14.49□□□□□ -0.09
PRKCB-201ENST00000303531 MAP3K6O95382 1288 aa14.49□□□□□ -0.09
PRKCB-201ENST00000303531 GTF2H3Q13889 308 aa14.49□□□□□ -0.09
PRKCB-201ENST00000303531 ANKS3Q6ZW76 656 aa14.49□□□□□ -0.09
PRKCB-201ENST00000303531 SNX31Q8N9S9 440 aa14.49□□□□□ -0.09
PRKCB-201ENST00000303531 FDFT1P37268 417 aa14.49□□□□□ -0.09
PRKCB-201ENST00000303531 TAF6P49848 677 aa14.49□□□□□ -0.09
PRKCB-201ENST00000303531 ACTRT1Q8TDG2 376 aa14.49□□□□□ -0.09
PRKCB-201ENST00000303531 SH3GL3Q99963 347 aa14.49□□□□□ -0.09
PRKCB-201ENST00000303531 CDKAL1Q5VV42 579 aa14.49□□□□□ -0.09
PRKCB-201ENST00000303531 MOXD1Q6UVY6 613 aa14.49□□□□□ -0.09
PRKCB-201ENST00000303531 DCP1BQ8IZD4 617 aaKnown RBP14.49□□□□□ -0.09
PRKCB-201ENST00000303531 DEFB129Q9H1M3 183 aa14.49□□□□□ -0.09
PRKCB-201ENST00000303531 WHRNQ9P202 907 aa14.49□□□□□ -0.09
PRKCB-201ENST00000303531 BLOC1S6Q9UL45 172 aa14.49□□□□□ -0.09
PRKCB-201ENST00000303531 LZTS1Q9Y250 596 aa14.49□□□□□ -0.09
PRKCB-201ENST00000303531 ALDH1A1P00352 501 aa14.49□□□□□ -0.09
PRKCB-201ENST00000303531 TRPC1P48995 793 aa14.49□□□□□ -0.09
PRKCB-201ENST00000303531 EZH2Q15910 746 aaKnown RBP14.49□□□□□ -0.09
PRKCB-201ENST00000303531 TFDP3Q5H9I0 405 aa14.49□□□□□ -0.09
PRKCB-201ENST00000303531 LRRC6Q86X45 466 aa14.49□□□□□ -0.09
PRKCB-201ENST00000303531 OSGEPQ9NPF4 335 aa14.49□□□□□ -0.09
PRKCB-201ENST00000303531 STK25O00506 426 aa14.48□□□□□ -0.09
PRKCB-201ENST00000303531 ARP10275 920 aa14.48□□□□□ -0.09
PRKCB-201ENST00000303531 TGM2P21980 687 aa14.48□□□□□ -0.09
PRKCB-201ENST00000303531 MUTP22033 750 aa14.48□□□□□ -0.09
PRKCB-201ENST00000303531 DGKDQ16760 1214 aa14.48□□□□□ -0.09
PRKCB-201ENST00000303531 CYB5D1Q6P9G0 228 aa14.48□□□□□ -0.09
PRKCB-201ENST00000303531 APOL5Q9BWW9 433 aa14.48□□□□□ -0.09
PRKCB-201ENST00000303531 V9GYQ6 96 aa14.48□□□□□ -0.09
PRKCB-201ENST00000303531 PPP3CCP48454 512 aa14.48□□□□□ -0.09
PRKCB-201ENST00000303531 RGS4P49798 205 aa14.48□□□□□ -0.09
PRKCB-201ENST00000303531 PARK7Q99497 189 aaKnown RBP14.48□□□□□ -0.09
PRKCB-201ENST00000303531 HEY2Q9UBP5 337 aa14.48□□□□□ -0.09
PRKCB-201ENST00000303531 ITM2BQ9Y287 266 aa14.48□□□□□ -0.09
PRKCB-201ENST00000303531 M0QYT0 321 aa14.48□□□□□ -0.09
PRKCB-201ENST00000303531 CYP2B6P20813 491 aa14.48□□□□□ -0.09
PRKCB-201ENST00000303531 SREBF1P36956 1147 aa14.48□□□□□ -0.09
PRKCB-201ENST00000303531 NUDT2P50583 147 aa14.48□□□□□ -0.09
PRKCB-201ENST00000303531 LINC00523Q86TU6 105 aa14.48□□□□□ -0.09
PRKCB-201ENST00000303531 PLD3Q8IV08 490 aa14.48□□□□□ -0.09
PRKCB-201ENST00000303531 RAET1EQ8TD07 263 aa14.48□□□□□ -0.09
PRKCB-201ENST00000303531 MAGEB18Q96M61 343 aa14.48□□□□□ -0.09
PRKCB-201ENST00000303531 L1RE1Q9UN81 338 aa14.48□□□□□ -0.09
PRKCB-201ENST00000303531 LMTK2Q8IWU2 1503 aa14.48□□□□□ -0.09
PRKCB-201ENST00000303531 CNTNAP4Q9C0A0 1308 aa14.48□□□□□ -0.09
PRKCB-201ENST00000303531 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.48□□□□□ -0.09
PRKCB-201ENST00000303531 AP5Z1O43299 807 aa14.48□□□□□ -0.09
PRKCB-201ENST00000303531 KDM1AO60341 852 aa14.48□□□□□ -0.09
PRKCB-201ENST00000303531 RHOBTB1O94844 696 aa14.48□□□□□ -0.09
PRKCB-201ENST00000303531 VHLP40337 213 aa14.48□□□□□ -0.09
PRKCB-201ENST00000303531 PLOD1Q02809 727 aaPredicted RBP14.48□□□□□ -0.09
PRKCB-201ENST00000303531 SGO1Q5FBB7 561 aa14.48□□□□□ -0.09
PRKCB-201ENST00000303531 ZRANB3Q5FWF4 1079 aa14.48□□□□□ -0.09
PRKCB-201ENST00000303531 ZNF571Q7Z3V5 609 aaPredicted RBP14.48□□□□□ -0.09
PRKCB-201ENST00000303531 ADCK2Q7Z695 626 aa14.48□□□□□ -0.09
PRKCB-201ENST00000303531 B4GALNT2Q8NHY0 566 aa14.48□□□□□ -0.09
PRKCB-201ENST00000303531 INPP5DQ92835 1189 aa14.48□□□□□ -0.09
PRKCB-201ENST00000303531 GFM2Q969S9 779 aaKnown RBP14.48□□□□□ -0.09
PRKCB-201ENST00000303531 DDX28Q9NUL7 540 aaKnown RBP14.48□□□□□ -0.09
PRKCB-201ENST00000303531 RPS6KL1Q9Y6S9 549 aa14.48□□□□□ -0.09
PRKCB-201ENST00000303531 FAM205AQ6ZU69 1335 aa14.48□□□□□ -0.09
PRKCB-201ENST00000303531 CLASP2O75122 1294 aaKnown RBP14.48□□□□□ -0.09
PRKCB-201ENST00000303531 DEAF1O75398 565 aaPredicted RBP14.48□□□□□ -0.09
PRKCB-201ENST00000303531 CHRM3P20309 590 aa14.48□□□□□ -0.09
PRKCB-201ENST00000303531 PNPLA4P41247 253 aa14.48□□□□□ -0.09
PRKCB-201ENST00000303531 GMPSP49915 693 aaPredicted RBP14.48□□□□□ -0.09
PRKCB-201ENST00000303531 CHSY1Q86X52 802 aa14.48□□□□□ -0.09
PRKCB-201ENST00000303531 ACER1Q8TDN7 264 aa14.48□□□□□ -0.09
PRKCB-201ENST00000303531 POP1Q99575 1024 aaKnown RBP14.48□□□□□ -0.09
PRKCB-201ENST00000303531 ARHGAP20Q9P2F6 1191 aa14.48□□□□□ -0.09
PRKCB-201ENST00000303531 CLTCQ00610 1675 aaKnown RBP14.48□□□□□ -0.09
PRKCB-201ENST00000303531 F8VZ95 297 aa14.48□□□□□ -0.09
PRKCB-201ENST00000303531 OGTO15294 1046 aa14.48□□□□□ -0.09
PRKCB-201ENST00000303531 PMPCBO75439 489 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms