RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 MGAT3Q09327 533 aa15.3■□□□□ 0.04
SHCBP1-201ENST00000303383 DSTYKQ6XUX3 929 aa15.3■□□□□ 0.04
SHCBP1-201ENST00000303383 ZNF296Q8WUU4 475 aaPredicted RBP15.3■□□□□ 0.04
SHCBP1-201ENST00000303383 RUFY1Q96T51 708 aa15.3■□□□□ 0.04
SHCBP1-201ENST00000303383 ADAM2Q99965 735 aa15.3■□□□□ 0.04
SHCBP1-201ENST00000303383 HEMGNQ9BXL5 484 aa15.3■□□□□ 0.04
SHCBP1-201ENST00000303383 ERVK-5Q9HDB9 667 aa15.3■□□□□ 0.04
SHCBP1-201ENST00000303383 GDF3Q9NR23 364 aa15.3■□□□□ 0.04
SHCBP1-201ENST00000303383 INPP5FQ9Y2H2 1132 aa15.3■□□□□ 0.04
SHCBP1-201ENST00000303383 TRIM17Q9Y577 477 aa15.3■□□□□ 0.04
SHCBP1-201ENST00000303383 MEIS3P2A8K0S8 358 aa15.3■□□□□ 0.04
SHCBP1-201ENST00000303383 CYB561D2O14569 222 aa15.3■□□□□ 0.04
SHCBP1-201ENST00000303383 PTGESO14684 152 aa15.3■□□□□ 0.04
SHCBP1-201ENST00000303383 RFC1P35251 1148 aaPredicted RBP15.3■□□□□ 0.04
SHCBP1-201ENST00000303383 FAM193AP78312 1265 aa15.3■□□□□ 0.04
SHCBP1-201ENST00000303383 HTRA3P83110 453 aa15.3■□□□□ 0.04
SHCBP1-201ENST00000303383 CUL1Q13616 776 aa15.3■□□□□ 0.04
SHCBP1-201ENST00000303383 DHX34Q14147 1143 aaKnown RBP15.3■□□□□ 0.04
SHCBP1-201ENST00000303383 CCDC137Q6PK04 289 aaKnown RBP15.3■□□□□ 0.04
SHCBP1-201ENST00000303383 XYLT1Q86Y38 959 aa15.3■□□□□ 0.04
SHCBP1-201ENST00000303383 CASKIN2Q8WXE0 1202 aa15.3■□□□□ 0.04
SHCBP1-201ENST00000303383 RNF25Q96BH1 459 aaPredicted RBP15.3■□□□□ 0.04
SHCBP1-201ENST00000303383 RBM41Q96IZ5 413 aaKnown RBP15.3■□□□□ 0.04
SHCBP1-201ENST00000303383 RUNDC3BQ96NL0 473 aa15.3■□□□□ 0.04
SHCBP1-201ENST00000303383 BEGAINQ9BUH8 593 aa15.3■□□□□ 0.04
SHCBP1-201ENST00000303383 GDAP2Q9NXN4 497 aa15.3■□□□□ 0.04
SHCBP1-201ENST00000303383 SCNN1GP51170 649 aa15.3■□□□□ 0.04
SHCBP1-201ENST00000303383 EMC1Q8N766 993 aa15.3■□□□□ 0.04
SHCBP1-201ENST00000303383 KLHL11Q9NVR0 708 aa15.3■□□□□ 0.04
SHCBP1-201ENST00000303383 TNFRSF8P28908 595 aa15.29■□□□□ 0.04
SHCBP1-201ENST00000303383 ZNF618Q5T7W0 954 aa15.29■□□□□ 0.04
SHCBP1-201ENST00000303383 RSAD1Q9HA92 442 aa15.29■□□□□ 0.04
SHCBP1-201ENST00000303383 ARL5CA6NH57 179 aa15.29■□□□□ 0.04
SHCBP1-201ENST00000303383 E5RJQ4 531 aa15.29■□□□□ 0.04
SHCBP1-201ENST00000303383 SPTLC1O15269 473 aa15.29■□□□□ 0.04
SHCBP1-201ENST00000303383 SKIP12755 728 aa15.29■□□□□ 0.04
SHCBP1-201ENST00000303383 PRMT2P55345 433 aa15.29■□□□□ 0.04
SHCBP1-201ENST00000303383 LPIN1Q14693 890 aa15.29■□□□□ 0.04
SHCBP1-201ENST00000303383 PPP1R7Q15435 360 aa15.29■□□□□ 0.04
SHCBP1-201ENST00000303383 KAZNQ674X7 775 aa15.29■□□□□ 0.04
SHCBP1-201ENST00000303383 KATNAL2Q8IYT4 538 aa15.29■□□□□ 0.04
SHCBP1-201ENST00000303383 DDX27Q96GQ7 796 aaKnown RBP15.29■□□□□ 0.04
SHCBP1-201ENST00000303383 PPP1R10Q96QC0 940 aaKnown RBP15.29■□□□□ 0.04
SHCBP1-201ENST00000303383 TSEN34Q9BSV6 310 aaKnown RBP15.29■□□□□ 0.04
SHCBP1-201ENST00000303383 DPEP3Q9H4B8 488 aa15.29■□□□□ 0.04
SHCBP1-201ENST00000303383 FAM114A2Q9NRY5 505 aa15.29■□□□□ 0.04
SHCBP1-201ENST00000303383 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.29■□□□□ 0.04
SHCBP1-201ENST00000303383 CENPFP49454 3210 aa15.29■□□□□ 0.04
SHCBP1-201ENST00000303383 FAM187AA6NFU0 413 aa15.29■□□□□ 0.04
SHCBP1-201ENST00000303383 SETSIPP0DME0 302 aa15.29■□□□□ 0.04
SHCBP1-201ENST00000303383 LRPAP1P30533 357 aa15.29■□□□□ 0.04
SHCBP1-201ENST00000303383 GOLGA6L1Q8N7Z2 621 aa15.29■□□□□ 0.04
SHCBP1-201ENST00000303383 PRELID2Q8N945 189 aa15.29■□□□□ 0.04
SHCBP1-201ENST00000303383 EXD1Q8NHP7 514 aa15.29■□□□□ 0.04
SHCBP1-201ENST00000303383 JOSD2Q8TAC2 188 aa15.29■□□□□ 0.04
SHCBP1-201ENST00000303383 AENQ8WTP8 325 aaKnown RBP15.29■□□□□ 0.04
SHCBP1-201ENST00000303383 TRIM51Q9BSJ1 452 aa15.29■□□□□ 0.04
SHCBP1-201ENST00000303383 TRPV6Q9H1D0 765 aa15.29■□□□□ 0.04
SHCBP1-201ENST00000303383 PTPN22Q9Y2R2 807 aa15.29■□□□□ 0.04
SHCBP1-201ENST00000303383 LRRD1A4D1F6 860 aa15.28■□□□□ 0.04
SHCBP1-201ENST00000303383 CASTOR2A6NHX0 329 aa15.28■□□□□ 0.04
SHCBP1-201ENST00000303383 PI4K2BG5E9Z4 385 aa15.28■□□□□ 0.04
SHCBP1-201ENST00000303383 MAP2K7O14733 419 aa15.28■□□□□ 0.04
SHCBP1-201ENST00000303383 RARAP10276 462 aa15.28■□□□□ 0.04
SHCBP1-201ENST00000303383 RALAP11233 206 aa15.28■□□□□ 0.04
SHCBP1-201ENST00000303383 YY1P25490 414 aa15.28■□□□□ 0.04
SHCBP1-201ENST00000303383 SNX1Q13596 522 aa15.28■□□□□ 0.04
SHCBP1-201ENST00000303383 RCOR2Q8IZ40 523 aa15.28■□□□□ 0.04
SHCBP1-201ENST00000303383 TOP6BLQ8N6T0 577 aa15.28■□□□□ 0.04
SHCBP1-201ENST00000303383 C1orf54Q8WWF1 131 aa15.28■□□□□ 0.04
SHCBP1-201ENST00000303383 CCDC114Q96M63 670 aa15.28■□□□□ 0.04
SHCBP1-201ENST00000303383 MED10Q9BTT4 135 aa15.28■□□□□ 0.04
SHCBP1-201ENST00000303383 OSBPL8Q9BZF1 889 aa15.28■□□□□ 0.04
SHCBP1-201ENST00000303383 ZWILCHQ9H900 591 aa15.28■□□□□ 0.04
SHCBP1-201ENST00000303383 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.28■□□□□ 0.04
SHCBP1-201ENST00000303383 ASNSD1Q9NWL6 643 aa15.28■□□□□ 0.04
SHCBP1-201ENST00000303383 DDX56Q9NY93 547 aaKnown RBP15.28■□□□□ 0.04
SHCBP1-201ENST00000303383 PODXLO00592 558 aa15.28■□□□□ 0.04
SHCBP1-201ENST00000303383 DAPK3O43293 454 aa15.28■□□□□ 0.04
SHCBP1-201ENST00000303383 CCDC130P13994 396 aa15.28■□□□□ 0.04
SHCBP1-201ENST00000303383 A0A1W2PQ45 241 aaPredicted RBP15.27■□□□□ 0.04
SHCBP1-201ENST00000303383 A0A1W2PQY0 241 aa15.27■□□□□ 0.04
SHCBP1-201ENST00000303383 TCRBV7S2A1N4TA0A589 114 aa15.27■□□□□ 0.04
SHCBP1-201ENST00000303383 POMCP01189 267 aa15.27■□□□□ 0.04
SHCBP1-201ENST00000303383 LMO2P25791 158 aa15.27■□□□□ 0.04
SHCBP1-201ENST00000303383 BCAT1P54687 386 aa15.27■□□□□ 0.04
SHCBP1-201ENST00000303383 OGDHQ02218 1023 aa15.27■□□□□ 0.04
SHCBP1-201ENST00000303383 DDX42Q86XP3 938 aaKnown RBP eCLIP15.27■□□□□ 0.04
SHCBP1-201ENST00000303383 CACNG4Q9UBN1 327 aa15.27■□□□□ 0.04
SHCBP1-201ENST00000303383 FSCN2O14926 492 aa15.27■□□□□ 0.04
SHCBP1-201ENST00000303383 HCRTO43612 131 aa15.27■□□□□ 0.04
SHCBP1-201ENST00000303383 GRAP2O75791 330 aa15.27■□□□□ 0.04
SHCBP1-201ENST00000303383 KRT7P08729 469 aa15.27■□□□□ 0.04
SHCBP1-201ENST00000303383 PLA2G4AP47712 749 aa15.27■□□□□ 0.04
SHCBP1-201ENST00000303383 BST2Q10589 180 aaKnown RBP15.27■□□□□ 0.04
SHCBP1-201ENST00000303383 PPP1R15BQ5SWA1 713 aa15.27■□□□□ 0.04
SHCBP1-201ENST00000303383 AGMOQ6ZNB7 445 aa15.27■□□□□ 0.04
SHCBP1-201ENST00000303383 JAMLQ86YT9 394 aa15.27■□□□□ 0.04
SHCBP1-201ENST00000303383 SENP8Q96LD8 212 aa15.27■□□□□ 0.04
SHCBP1-201ENST00000303383 PTCH2Q9Y6C5 1203 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms