RNA–Protein interactions for RNA: ENST00000302787.2

LETM1-201, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LETM1, Length 5,462 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-201ENST00000302787 ORC1Q13415 861 aa21.91■■□□□ 1.1
LETM1-201ENST00000302787 KCNT1Q5JUK3 1230 aa21.91■■□□□ 1.1
LETM1-201ENST00000302787 HIST1H2AHQ96KK5 128 aa21.91■■□□□ 1.1
LETM1-201ENST00000302787 HIST1H2AJQ99878 128 aa21.91■■□□□ 1.1
LETM1-201ENST00000302787 H2AFJQ9BTM1 129 aa21.91■■□□□ 1.1
LETM1-201ENST00000302787 DEFB129Q9H1M3 183 aa21.91■■□□□ 1.1
LETM1-201ENST00000302787 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP21.91■■□□□ 1.1
LETM1-201ENST00000302787 PRPF4O43172 522 aaKnown RBP eCLIP21.9■■□□□ 1.17e-8■■■□□ 14.7
LETM1-201ENST00000302787 RPS6KA5O75582 802 aa21.9■■□□□ 1.1
LETM1-201ENST00000302787 RRM1P23921 792 aa21.9■■□□□ 1.1
LETM1-201ENST00000302787 SLC47A2Q86VL8 602 aa21.9■■□□□ 1.1
LETM1-201ENST00000302787 CYGBQ8WWM9 190 aa21.9■■□□□ 1.1
LETM1-201ENST00000302787 NAMPTP43490 491 aa21.9■■□□□ 1.1
LETM1-201ENST00000302787 TBX2Q13207 712 aaPredicted RBP21.9■■□□□ 1.1
LETM1-201ENST00000302787 NOTUMQ6P988 496 aa21.9■■□□□ 1.1
LETM1-201ENST00000302787 LRRN4CLQ8ND94 238 aa21.9■■□□□ 1.1
LETM1-201ENST00000302787 TMC2Q8TDI7 906 aa21.9■■□□□ 1.1
LETM1-201ENST00000302787 SLC30A1Q9Y6M5 507 aa21.9■■□□□ 1.1
LETM1-201ENST00000302787 CAP2P40123 477 aa21.9■■□□□ 1.1
LETM1-201ENST00000302787 PTK2BQ14289 1009 aa21.9■■□□□ 1.1
LETM1-201ENST00000302787 CLEC4FQ8N1N0 589 aa21.9■■□□□ 1.1
LETM1-201ENST00000302787 MTMR8Q96EF0 704 aa21.9■■□□□ 1.1
LETM1-201ENST00000302787 CD274Q9NZQ7 290 aa21.9■■□□□ 1.1
LETM1-201ENST00000302787 DENND5BQ6ZUT9 1274 aa21.9■■□□□ 1.1
LETM1-201ENST00000302787 GMCL1P1Q8NEA9 526 aa21.9■■□□□ 1.1
LETM1-201ENST00000302787 GMCL1Q96IK5 515 aa21.9■■□□□ 1.1
LETM1-201ENST00000302787 HAO1Q9UJM8 370 aa21.9■■□□□ 1.1
LETM1-201ENST00000302787 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.9■■□□□ 1.1
LETM1-201ENST00000302787 HSPA1AP0DMV8 641 aaKnown RBP21.9■■□□□ 1.1
LETM1-201ENST00000302787 HSPA1BP0DMV9 641 aaKnown RBP21.9■■□□□ 1.1
LETM1-201ENST00000302787 TAF6P49848 677 aa21.9■■□□□ 1.1
LETM1-201ENST00000302787 GMPSP49915 693 aaPredicted RBP21.9■■□□□ 1.1
LETM1-201ENST00000302787 MRPS35P82673 323 aaKnown RBP21.9■■□□□ 1.1
LETM1-201ENST00000302787 OTUD4Q01804 1114 aaKnown RBP21.9■■□□□ 1.1
LETM1-201ENST00000302787 KCNMA1Q12791 1236 aa21.9■■□□□ 1.1
LETM1-201ENST00000302787 CGRRF1Q99675 332 aa21.9■■□□□ 1.1
LETM1-201ENST00000302787 MEGF6O75095 1541 aa21.89■■□□□ 1.1
LETM1-201ENST00000302787 GTPBP10A4D1E9 387 aaKnown RBP21.89■■□□□ 1.1
LETM1-201ENST00000302787 KRT16P08779 473 aa21.89■■□□□ 1.1
LETM1-201ENST00000302787 FAM200BP0CF97 657 aa21.89■■□□□ 1.1
LETM1-201ENST00000302787 PTK6Q13882 451 aa21.89■■□□□ 1.1
LETM1-201ENST00000302787 KRT72Q14CN4 511 aa21.89■■□□□ 1.1
LETM1-201ENST00000302787 LOC102724159A0A0B4J2E5 919 aa21.89■■□□□ 1.09
LETM1-201ENST00000302787 PJA2O43164 708 aa21.89■■□□□ 1.09
LETM1-201ENST00000302787 PNPLA4P41247 253 aa21.89■■□□□ 1.09
LETM1-201ENST00000302787 PWP2Q15269 919 aaKnown RBP21.89■■□□□ 1.09
LETM1-201ENST00000302787 DNAAF5Q86Y56 855 aa21.89■■□□□ 1.09
LETM1-201ENST00000302787 TTC30BQ8N4P2 665 aa21.89■■□□□ 1.09
LETM1-201ENST00000302787 EFHBQ8N7U6 833 aa21.89■■□□□ 1.09
LETM1-201ENST00000302787 TAS1R2Q8TE23 839 aa21.89■■□□□ 1.09
LETM1-201ENST00000302787 ENO4A6NNW6 628 aa21.89■■□□□ 1.09
LETM1-201ENST00000302787 PROSCO94903 275 aa21.89■■□□□ 1.09
LETM1-201ENST00000302787 C6orf222P0C671 652 aaPredicted RBP21.89■■□□□ 1.09
LETM1-201ENST00000302787 MAP4P27816 1152 aaKnown RBP21.89■■□□□ 1.09
LETM1-201ENST00000302787 C16orf96A6NNT2 1141 aa21.89■■□□□ 1.09
LETM1-201ENST00000302787 ZSCAN9O15535 394 aaPredicted RBP21.89■■□□□ 1.09
LETM1-201ENST00000302787 VCPP55072 806 aaKnown RBP21.89■■□□□ 1.09
LETM1-201ENST00000302787 ZDHHC15Q96MV8 337 aa21.89■■□□□ 1.09
LETM1-201ENST00000302787 TRPC7Q9HCX4 862 aa21.89■■□□□ 1.09
LETM1-201ENST00000302787 NWD1Q149M9 1564 aa21.89■■□□□ 1.09
LETM1-201ENST00000302787 SYNDIG1LA6NDD5 238 aa21.88■■□□□ 1.09
LETM1-201ENST00000302787 GLRA3O75311 464 aa21.88■■□□□ 1.09
LETM1-201ENST00000302787 RANBP1P43487 201 aa21.88■■□□□ 1.09
LETM1-201ENST00000302787 CYP24A1Q07973 514 aa21.88■■□□□ 1.09
LETM1-201ENST00000302787 LINC00523Q86TU6 105 aa21.88■■□□□ 1.09
LETM1-201ENST00000302787 GID8Q9NWU2 228 aa21.88■■□□□ 1.09
LETM1-201ENST00000302787 LAMC2Q13753 1193 aa21.88■■□□□ 1.09
LETM1-201ENST00000302787 ZC3H12BQ5HYM0 836 aaKnown RBP21.88■■□□□ 1.09
LETM1-201ENST00000302787 SLC30A9Q6PML9 568 aa21.88■■□□□ 1.09
LETM1-201ENST00000302787 SPOCD1Q6ZMY3 1216 aa21.88■■□□□ 1.09
LETM1-201ENST00000302787 TXNRD3Q86VQ6 643 aa21.88■■□□□ 1.09
LETM1-201ENST00000302787 GFM2Q969S9 779 aaKnown RBP21.88■■□□□ 1.09
LETM1-201ENST00000302787 PYGLP06737 847 aa21.88■■□□□ 1.09
LETM1-201ENST00000302787 HOXD10P28358 340 aa21.88■■□□□ 1.09
LETM1-201ENST00000302787 SERPINB10P48595 397 aa21.88■■□□□ 1.09
LETM1-201ENST00000302787 C11orf63Q6NUN7 778 aa21.88■■□□□ 1.09
LETM1-201ENST00000302787 TAGAPQ8N103 731 aa21.88■■□□□ 1.09
LETM1-201ENST00000302787 EHD4Q9H223 541 aa21.88■■□□□ 1.09
LETM1-201ENST00000302787 SUFUQ9UMX1 484 aa21.88■■□□□ 1.09
LETM1-201ENST00000302787 ZBTB39O15060 712 aa21.88■■□□□ 1.09
LETM1-201ENST00000302787 SOX11P35716 441 aa21.88■■□□□ 1.09
LETM1-201ENST00000302787 CLEC16AQ2KHT3 1053 aa21.88■■□□□ 1.09
LETM1-201ENST00000302787 EXD1Q8NHP7 514 aa21.88■■□□□ 1.09
LETM1-201ENST00000302787 ZNF518BQ9C0D4 1074 aa21.88■■□□□ 1.09
LETM1-201ENST00000302787 LATS2Q9NRM7 1088 aa21.88■■□□□ 1.09
LETM1-201ENST00000302787 VDRP11473 427 aa21.87■■□□□ 1.09
LETM1-201ENST00000302787 PTENP60484 403 aa21.87■■□□□ 1.09
LETM1-201ENST00000302787 DGKDQ16760 1214 aa21.87■■□□□ 1.09
LETM1-201ENST00000302787 LAYNQ6UX15 382 aa21.87■■□□□ 1.09
LETM1-201ENST00000302787 DEPDC5O75140 1603 aa21.87■■□□□ 1.09
LETM1-201ENST00000302787 A0A087X0B3 334 aa21.87■■□□□ 1.09
LETM1-201ENST00000302787 TRPC5OSA6NMA1 111 aa21.87■■□□□ 1.09
LETM1-201ENST00000302787 SUPT20HL2P0C7V6 817 aa21.87■■□□□ 1.09
LETM1-201ENST00000302787 TGM2P21980 687 aa21.87■■□□□ 1.09
LETM1-201ENST00000302787 KCNA4P22459 653 aa21.87■■□□□ 1.09
LETM1-201ENST00000302787 CASP7P55210 303 aa21.87■■□□□ 1.09
LETM1-201ENST00000302787 PSMC6P62333 389 aa21.87■■□□□ 1.09
LETM1-201ENST00000302787 PDK2Q15119 407 aa21.87■■□□□ 1.09
LETM1-201ENST00000302787 AGBL3Q8NEM8 1001 aa21.87■■□□□ 1.09
LETM1-201ENST00000302787 PRMT6Q96LA8 375 aaPredicted RBP21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms