RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 RPL10AP62906 217 aaKnown RBP13.9□□□□□ -0.18
CASC4-201ENST00000299957 CYTH1Q15438 398 aa13.9□□□□□ -0.18
CASC4-201ENST00000299957 C15orf59Q2T9L4 293 aaPredicted RBP13.9□□□□□ -0.18
CASC4-201ENST00000299957 LAYNQ6UX15 382 aa13.9□□□□□ -0.18
CASC4-201ENST00000299957 ZDHHC24Q6UX98 284 aa13.9□□□□□ -0.18
CASC4-201ENST00000299957 KCPQ6ZWJ8 1503 aa13.9□□□□□ -0.18
CASC4-201ENST00000299957 ANO5Q75V66 913 aa13.9□□□□□ -0.18
CASC4-201ENST00000299957 ACOT1Q86TX2 421 aa13.9□□□□□ -0.18
CASC4-201ENST00000299957 ZNF75CPQ92670 426 aaPredicted RBP13.9□□□□□ -0.18
CASC4-201ENST00000299957 TBC1D10AQ9BXI6 508 aa13.9□□□□□ -0.18
CASC4-201ENST00000299957 NUF2Q9BZD4 464 aa13.9□□□□□ -0.18
CASC4-201ENST00000299957 GEMIN8Q9NWZ8 242 aaKnown RBP13.9□□□□□ -0.18
CASC4-201ENST00000299957 GRHL1Q9NZI5 618 aa13.9□□□□□ -0.18
CASC4-201ENST00000299957 UBP1Q9NZI7 540 aa13.9□□□□□ -0.18
CASC4-201ENST00000299957 ADA2Q9NZK5 511 aa13.9□□□□□ -0.18
CASC4-201ENST00000299957 KBTBD13C9JR72 458 aa13.9□□□□□ -0.18
CASC4-201ENST00000299957 MOCS2O96007 188 aaPredicted RBP13.9□□□□□ -0.18
CASC4-201ENST00000299957 TXNP10599 105 aaKnown RBP13.9□□□□□ -0.18
CASC4-201ENST00000299957 CLK2P49760 499 aaKnown RBP13.9□□□□□ -0.18
CASC4-201ENST00000299957 POLNQ7Z5Q5 900 aa13.9□□□□□ -0.18
CASC4-201ENST00000299957 LCA5Q86VQ0 697 aa13.9□□□□□ -0.18
CASC4-201ENST00000299957 RTKN2Q8IZC4 609 aa13.9□□□□□ -0.18
CASC4-201ENST00000299957 DAW1Q8N136 415 aa13.9□□□□□ -0.18
CASC4-201ENST00000299957 CKAP2Q8WWK9 683 aa13.9□□□□□ -0.18
CASC4-201ENST00000299957 PFDN4Q9NQP4 134 aa13.9□□□□□ -0.18
CASC4-201ENST00000299957 PXMP2Q9NR77 195 aa13.9□□□□□ -0.18
CASC4-201ENST00000299957 GTSE1Q9NYZ3 720 aa13.9□□□□□ -0.18
CASC4-201ENST00000299957 ANGPTL2Q9UKU9 493 aa13.9□□□□□ -0.18
CASC4-201ENST00000299957 USP12O75317 370 aa13.9□□□□□ -0.18
CASC4-201ENST00000299957 ZWINTO95229 277 aa13.9□□□□□ -0.18
CASC4-201ENST00000299957 TCF4P15884 667 aa13.9□□□□□ -0.18
CASC4-201ENST00000299957 DPEP1P16444 411 aa13.9□□□□□ -0.18
CASC4-201ENST00000299957 PIGHQ14442 188 aaPredicted RBP13.9□□□□□ -0.18
CASC4-201ENST00000299957 KBTBD12Q3ZCT8 623 aa13.9□□□□□ -0.18
CASC4-201ENST00000299957 PREPLQ4J6C6 727 aaPredicted RBP13.9□□□□□ -0.18
CASC4-201ENST00000299957 MYLK4Q86YV6 388 aaPredicted RBP13.9□□□□□ -0.18
CASC4-201ENST00000299957 PPIL6Q8IXY8 311 aa13.9□□□□□ -0.18
CASC4-201ENST00000299957 SIX6OS1Q8N1H7 587 aa13.9□□□□□ -0.18
CASC4-201ENST00000299957 MKL1Q969V6 931 aa13.9□□□□□ -0.18
CASC4-201ENST00000299957 E2F7Q96AV8 911 aa13.9□□□□□ -0.18
CASC4-201ENST00000299957 HDAC11Q96DB2 347 aa13.9□□□□□ -0.18
CASC4-201ENST00000299957 NSL1Q96IY1 281 aa13.9□□□□□ -0.18
CASC4-201ENST00000299957 CPB2Q96IY4 423 aa13.9□□□□□ -0.18
CASC4-201ENST00000299957 MYOZ2Q9NPC6 264 aa13.9□□□□□ -0.18
CASC4-201ENST00000299957 ZNRF3Q9ULT6 936 aa13.9□□□□□ -0.18
CASC4-201ENST00000299957 RIPK3Q9Y572 518 aa13.9□□□□□ -0.18
CASC4-201ENST00000299957 FAM237BA0A1B0GVD1 139 aa13.9□□□□□ -0.19
CASC4-201ENST00000299957 DNAJC6O75061 913 aa13.9□□□□□ -0.19
CASC4-201ENST00000299957 ZMPSTE24O75844 475 aa13.9□□□□□ -0.19
CASC4-201ENST00000299957 PDE5AO76074 875 aa13.9□□□□□ -0.19
CASC4-201ENST00000299957 KCNA4P22459 653 aa13.9□□□□□ -0.19
CASC4-201ENST00000299957 GLRBP48167 497 aa13.9□□□□□ -0.19
CASC4-201ENST00000299957 MARSP56192 900 aaKnown RBP13.9□□□□□ -0.19
CASC4-201ENST00000299957 CENPCQ03188 943 aa13.9□□□□□ -0.19
CASC4-201ENST00000299957 KPNB1Q14974 876 aaKnown RBP13.9□□□□□ -0.19
CASC4-201ENST00000299957 DBN1Q16643 649 aa13.9□□□□□ -0.19
CASC4-201ENST00000299957 LY6KQ17RY6 165 aa13.9□□□□□ -0.19
CASC4-201ENST00000299957 SGSM1Q2NKQ1 1148 aa13.9□□□□□ -0.19
CASC4-201ENST00000299957 TDRD10Q5VZ19 366 aaKnown RBP13.9□□□□□ -0.19
CASC4-201ENST00000299957 FAM131BQ86XD5 332 aa13.9□□□□□ -0.19
CASC4-201ENST00000299957 TEX2Q8IWB9 1127 aa13.9□□□□□ -0.19
CASC4-201ENST00000299957 GLIS1Q8NBF1 620 aa13.9□□□□□ -0.19
CASC4-201ENST00000299957 ZNF280CQ8ND82 737 aa13.9□□□□□ -0.19
CASC4-201ENST00000299957 PCYOX1Q9UHG3 505 aa13.9□□□□□ -0.19
CASC4-201ENST00000299957 CES2O00748 559 aa13.89□□□□□ -0.19
CASC4-201ENST00000299957 DSG3P32926 999 aa13.89□□□□□ -0.19
CASC4-201ENST00000299957 CXCL9Q07325 125 aa13.89□□□□□ -0.19
CASC4-201ENST00000299957 MAMLD1Q13495 774 aa13.89□□□□□ -0.19
CASC4-201ENST00000299957 RASGEF1CQ8N431 466 aa13.89□□□□□ -0.19
CASC4-201ENST00000299957 ANKEF1Q9NU02 776 aa13.89□□□□□ -0.19
CASC4-201ENST00000299957 HOXC10Q9NYD6 342 aa13.89□□□□□ -0.19
CASC4-201ENST00000299957 SLC17A7Q9P2U7 560 aa13.89□□□□□ -0.19
CASC4-201ENST00000299957 RGPD5Q99666 1765 aa13.89□□□□□ -0.19
CASC4-201ENST00000299957 APOL1O14791 398 aa13.89□□□□□ -0.19
CASC4-201ENST00000299957 PFDN1O60925 122 aa13.89□□□□□ -0.19
CASC4-201ENST00000299957 CCNE2O96020 404 aa13.89□□□□□ -0.19
CASC4-201ENST00000299957 JAM2P57087 298 aa13.89□□□□□ -0.19
CASC4-201ENST00000299957 SPIRE1Q08AE8 756 aa13.89□□□□□ -0.19
CASC4-201ENST00000299957 SLC1A5Q15758 541 aa13.89□□□□□ -0.19
CASC4-201ENST00000299957 COBLL1Q53SF7 1204 aa13.89□□□□□ -0.19
CASC4-201ENST00000299957 HYIQ5T013 277 aa13.89□□□□□ -0.19
CASC4-201ENST00000299957 DENND5BQ6ZUT9 1274 aa13.89□□□□□ -0.19
CASC4-201ENST00000299957 SYDE1Q6ZW31 735 aaPredicted RBP13.89□□□□□ -0.19
CASC4-201ENST00000299957 ART4Q93070 314 aa13.89□□□□□ -0.19
CASC4-201ENST00000299957 DDX56Q9NY93 547 aaKnown RBP13.89□□□□□ -0.19
CASC4-201ENST00000299957 SENP1Q9P0U3 644 aa13.89□□□□□ -0.19
CASC4-201ENST00000299957 FAM155BO75949 473 aa13.89□□□□□ -0.19
CASC4-201ENST00000299957 NUDT17P0C025 328 aa13.89□□□□□ -0.19
CASC4-201ENST00000299957 SRGAP2BP0DMP2 458 aa13.89□□□□□ -0.19
CASC4-201ENST00000299957 ATF7IP2Q5U623 682 aa13.89□□□□□ -0.19
CASC4-201ENST00000299957 EFCAB12Q6NXP0 572 aa13.89□□□□□ -0.19
CASC4-201ENST00000299957 C4orf19Q8IY42 314 aa13.89□□□□□ -0.19
CASC4-201ENST00000299957 EXD1Q8NHP7 514 aa13.89□□□□□ -0.19
CASC4-201ENST00000299957 TEKT4Q8WW24 435 aa13.89□□□□□ -0.19
CASC4-201ENST00000299957 TMA16Q96EY4 203 aaKnown RBP13.89□□□□□ -0.19
CASC4-201ENST00000299957 ASTN2O75129 1339 aaPredicted RBP13.88□□□□□ -0.19
CASC4-201ENST00000299957 IGLV3-22A0A075B6J6 115 aa13.88□□□□□ -0.19
CASC4-201ENST00000299957 WNT10BO00744 389 aa13.88□□□□□ -0.19
CASC4-201ENST00000299957 DNALI1O14645 258 aaPredicted RBP13.88□□□□□ -0.19
CASC4-201ENST00000299957 VTNP04004 478 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms