RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 APBB1IPQ7Z5R6 666 aaPredicted RBP22.55■■□□□ 1.2
SMCO4-201ENST00000298966 DDX27Q96GQ7 796 aaKnown RBP22.55■■□□□ 1.2
SMCO4-201ENST00000298966 CORO1BQ9BR76 489 aa22.55■■□□□ 1.2
SMCO4-201ENST00000298966 KCNF1Q9H3M0 494 aa22.55■■□□□ 1.2
SMCO4-201ENST00000298966 TRIP11Q15643 1979 aa22.55■■□□□ 1.2
SMCO4-201ENST00000298966 ANKRD63C9JTQ0 380 aa22.54■■□□□ 1.2
SMCO4-201ENST00000298966 EXTL3O43909 919 aa22.54■■□□□ 1.2
SMCO4-201ENST00000298966 ADSSP30520 456 aa22.54■■□□□ 1.2
SMCO4-201ENST00000298966 CASP4P49662 377 aa22.54■■□□□ 1.2
SMCO4-201ENST00000298966 POU5F1Q01860 360 aaKnown RBP22.54■■□□□ 1.2
SMCO4-201ENST00000298966 BFSP1Q12934 665 aa22.54■■□□□ 1.2
SMCO4-201ENST00000298966 CSRP2Q16527 193 aa22.54■■□□□ 1.2
SMCO4-201ENST00000298966 KYAT1Q16773 422 aa22.54■■□□□ 1.2
SMCO4-201ENST00000298966 FAM78AQ5JUQ0 283 aa22.54■■□□□ 1.2
SMCO4-201ENST00000298966 SLC39A4Q6P5W5 647 aa22.54■■□□□ 1.2
SMCO4-201ENST00000298966 PRR23CQ6ZRP0 262 aa22.54■■□□□ 1.2
SMCO4-201ENST00000298966 LRRC8AQ8IWT6 810 aa22.54■■□□□ 1.2
SMCO4-201ENST00000298966 ZNF461Q8TAF7 563 aa22.54■■□□□ 1.2
SMCO4-201ENST00000298966 TMC2Q8TDI7 906 aa22.54■■□□□ 1.2
SMCO4-201ENST00000298966 UROC1Q96N76 676 aa22.54■■□□□ 1.2
SMCO4-201ENST00000298966 ZNF334Q9HCZ1 680 aaPredicted RBP22.54■■□□□ 1.2
SMCO4-201ENST00000298966 TRPV5Q9NQA5 729 aa22.54■■□□□ 1.2
SMCO4-201ENST00000298966 DAAM1Q9Y4D1 1078 aa22.54■■□□□ 1.2
SMCO4-201ENST00000298966 PIAS3Q9Y6X2 628 aa22.54■■□□□ 1.2
SMCO4-201ENST00000298966 TTLL13PA6NNM8 815 aa22.53■■□□□ 1.2
SMCO4-201ENST00000298966 PMM2O15305 246 aa22.53■■□□□ 1.2
SMCO4-201ENST00000298966 P4HA2O15460 535 aa22.53■■□□□ 1.2
SMCO4-201ENST00000298966 FOXD2O60548 495 aaPredicted RBP22.53■■□□□ 1.2
SMCO4-201ENST00000298966 MICAL2O94851 1124 aa22.53■■□□□ 1.2
SMCO4-201ENST00000298966 KCNA4P22459 653 aa22.53■■□□□ 1.2
SMCO4-201ENST00000298966 GDI1P31150 447 aa22.53■■□□□ 1.2
SMCO4-201ENST00000298966 CLCNKBP51801 687 aa22.53■■□□□ 1.2
SMCO4-201ENST00000298966 ROR1Q01973 937 aa22.53■■□□□ 1.2
SMCO4-201ENST00000298966 KCNH2Q12809 1159 aa22.53■■□□□ 1.2
SMCO4-201ENST00000298966 SNRNP35Q16560 246 aaKnown RBP22.53■■□□□ 1.2
SMCO4-201ENST00000298966 PRSS36Q5K4E3 855 aa22.53■■□□□ 1.2
SMCO4-201ENST00000298966 PDZD4Q76G19 769 aaPredicted RBP22.53■■□□□ 1.2
SMCO4-201ENST00000298966 CNGA4Q8IV77 575 aa22.53■■□□□ 1.2
SMCO4-201ENST00000298966 CACTINQ8WUQ7 758 aaKnown RBP22.53■■□□□ 1.2
SMCO4-201ENST00000298966 DDX1Q92499 740 aaKnown RBP22.53■■□□□ 1.2
SMCO4-201ENST00000298966 SLC35C1Q96A29 364 aa22.53■■□□□ 1.2
SMCO4-201ENST00000298966 TCEAL4Q96EI5 215 aa22.53■■□□□ 1.2
SMCO4-201ENST00000298966 ACO2Q99798 780 aaKnown RBP22.53■■□□□ 1.2
SMCO4-201ENST00000298966 TARS2Q9BW92 718 aaKnown RBP22.53■■□□□ 1.2
SMCO4-201ENST00000298966 EDEM3Q9BZQ6 932 aa22.53■■□□□ 1.2
SMCO4-201ENST00000298966 EIF2AK3Q9NZJ5 1116 aaKnown RBP22.53■■□□□ 1.2
SMCO4-201ENST00000298966 AGO2Q9UKV8 859 aaKnown RBP22.53■■□□□ 1.2
SMCO4-201ENST00000298966 TNFSF13BQ9Y275 285 aa22.53■■□□□ 1.2
SMCO4-201ENST00000298966 COL4A2P08572 1712 aa22.53■■□□□ 1.2
SMCO4-201ENST00000298966 A0A0B4J269 797 aa22.52■■□□□ 1.2
SMCO4-201ENST00000298966 ZNF233A6NK53 670 aa22.52■■□□□ 1.2
SMCO4-201ENST00000298966 CLDN3O15551 220 aa22.52■■□□□ 1.2
SMCO4-201ENST00000298966 PSMC3P17980 439 aa22.52■■□□□ 1.2
SMCO4-201ENST00000298966 CNR2P34972 360 aa22.52■■□□□ 1.2
SMCO4-201ENST00000298966 SATB1Q01826 763 aa22.52■■□□□ 1.2
SMCO4-201ENST00000298966 CETN1Q12798 172 aa22.52■■□□□ 1.2
SMCO4-201ENST00000298966 DCAF4L1Q3SXM0 396 aa22.52■■□□□ 1.2
SMCO4-201ENST00000298966 GLRA4Q5JXX5 417 aa22.52■■□□□ 1.2
SMCO4-201ENST00000298966 CYP4A22Q5TCH4 519 aa22.52■■□□□ 1.2
SMCO4-201ENST00000298966 CCDC112Q8NEF3 446 aa22.52■■□□□ 1.2
SMCO4-201ENST00000298966 DEPDC1BQ8WUY9 529 aa22.52■■□□□ 1.2
SMCO4-201ENST00000298966 ASB16Q96NS5 453 aa22.52■■□□□ 1.2
SMCO4-201ENST00000298966 PCIF1Q9H4Z3 704 aa22.52■■□□□ 1.2
SMCO4-201ENST00000298966 A0A1W2PQJ5 194 aa22.51■■□□□ 1.19
SMCO4-201ENST00000298966 WDR27A2RRH5 827 aa22.51■■□□□ 1.19
SMCO4-201ENST00000298966 I3L4J1 428 aa22.51■■□□□ 1.19
SMCO4-201ENST00000298966 ABLIM3O94929 683 aa22.51■■□□□ 1.19
SMCO4-201ENST00000298966 PROZP22891 400 aa22.51■■□□□ 1.19
SMCO4-201ENST00000298966 IGFBP6P24592 240 aaPredicted RBP22.51■■□□□ 1.19
SMCO4-201ENST00000298966 MSNP26038 577 aaKnown RBP22.51■■□□□ 1.19
SMCO4-201ENST00000298966 GTF2H1P32780 548 aa22.51■■□□□ 1.19
SMCO4-201ENST00000298966 VAMP7P51809 220 aa22.51■■□□□ 1.19
SMCO4-201ENST00000298966 MCL1Q07820 350 aa22.51■■□□□ 1.19
SMCO4-201ENST00000298966 SURF1Q15526 300 aa22.51■■□□□ 1.19
SMCO4-201ENST00000298966 UPP1Q16831 310 aa22.51■■□□□ 1.19
SMCO4-201ENST00000298966 DCAF17Q5H9S7 520 aaPredicted RBP22.51■■□□□ 1.19
SMCO4-201ENST00000298966 TCERG1LQ5VWI1 586 aa22.51■■□□□ 1.19
SMCO4-201ENST00000298966 SLC8B1Q6J4K2 584 aa22.51■■□□□ 1.19
SMCO4-201ENST00000298966 MPZL3Q6UWV2 235 aa22.51■■□□□ 1.19
SMCO4-201ENST00000298966 VITQ6UXI7 678 aa22.51■■□□□ 1.19
SMCO4-201ENST00000298966 SMARCD2Q92925 531 aa22.51■■□□□ 1.19
SMCO4-201ENST00000298966 PPP1R10Q96QC0 940 aaKnown RBP22.51■■□□□ 1.19
SMCO4-201ENST00000298966 MSTO1Q9BUK6 570 aa22.51■■□□□ 1.19
SMCO4-201ENST00000298966 IKZF4Q9H2S9 585 aa22.51■■□□□ 1.19
SMCO4-201ENST00000298966 CYP4F11Q9HBI6 524 aa22.51■■□□□ 1.19
SMCO4-201ENST00000298966 CHURC1-FNTBB4DL54 471 aa22.5■■□□□ 1.19
SMCO4-201ENST00000298966 TISP43B9A030 160 aa22.5■■□□□ 1.19
SMCO4-201ENST00000298966 ZNF263O14978 683 aa22.5■■□□□ 1.19
SMCO4-201ENST00000298966 CHRNB1P11230 501 aa22.5■■□□□ 1.19
SMCO4-201ENST00000298966 ATF2P15336 505 aa22.5■■□□□ 1.19
SMCO4-201ENST00000298966 MATR3P43243 847 aaKnown RBP eCLIP22.5■■□□□ 1.19
SMCO4-201ENST00000298966 BRCC3P46736 316 aa22.5■■□□□ 1.19
SMCO4-201ENST00000298966 FNTBP49356 437 aa22.5■■□□□ 1.19
SMCO4-201ENST00000298966 ARPP19P56211 112 aa22.5■■□□□ 1.19
SMCO4-201ENST00000298966 SYCP1Q15431 976 aa22.5■■□□□ 1.19
SMCO4-201ENST00000298966 ATF7IP2Q5U623 682 aa22.5■■□□□ 1.19
SMCO4-201ENST00000298966 EEF1DP3Q658K8 133 aa22.5■■□□□ 1.19
SMCO4-201ENST00000298966 CD300LGQ6UXG3 332 aa22.5■■□□□ 1.19
SMCO4-201ENST00000298966 TCEAL8Q8IYN2 117 aa22.5■■□□□ 1.19
SMCO4-201ENST00000298966 ELMOD1Q8N336 334 aa22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms