RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 USH1CQ9Y6N9 552 aa25.62■■□□□ 1.69
SPTSSA-201ENST00000298130 ARID2Q68CP9 1835 aa25.62■■□□□ 1.69
SPTSSA-201ENST00000298130 C2orf71A6NGG8 1288 aa25.62■■□□□ 1.69
SPTSSA-201ENST00000298130 C3orf70A6NLC5 250 aaPredicted RBP25.62■■□□□ 1.69
SPTSSA-201ENST00000298130 STAM2O75886 525 aa25.62■■□□□ 1.69
SPTSSA-201ENST00000298130 KRT3P12035 628 aa25.62■■□□□ 1.69
SPTSSA-201ENST00000298130 IGDCC3Q8IVU1 814 aa25.62■■□□□ 1.69
SPTSSA-201ENST00000298130 RNF149Q8NC42 400 aa25.62■■□□□ 1.69
SPTSSA-201ENST00000298130 SLC35B2Q8TB61 432 aa25.62■■□□□ 1.69
SPTSSA-201ENST00000298130 TCP10LQ8TDR4 215 aa25.62■■□□□ 1.69
SPTSSA-201ENST00000298130 TRAPPC12Q8WVT3 735 aa25.62■■□□□ 1.69
SPTSSA-201ENST00000298130 STK32BQ9NY57 414 aa25.62■■□□□ 1.69
SPTSSA-201ENST00000298130 ZMYND8Q9ULU4 1186 aaPredicted RBP25.62■■□□□ 1.69
SPTSSA-201ENST00000298130 PRPF4O43172 522 aaKnown RBP eCLIP25.61■■□□□ 1.693e-10■■■■□ 25.2
SPTSSA-201ENST00000298130 ADCY3O60266 1144 aa25.61■■□□□ 1.69
SPTSSA-201ENST00000298130 UPP2O95045 317 aa25.61■■□□□ 1.69
SPTSSA-201ENST00000298130 GM2AP17900 193 aa25.61■■□□□ 1.69
SPTSSA-201ENST00000298130 UBA1P22314 1058 aaKnown RBP25.61■■□□□ 1.69
SPTSSA-201ENST00000298130 GCLCP48506 637 aaPredicted RBP25.61■■□□□ 1.69
SPTSSA-201ENST00000298130 ACVR2BQ13705 512 aa25.61■■□□□ 1.69
SPTSSA-201ENST00000298130 STXBP2Q15833 593 aa25.61■■□□□ 1.69
SPTSSA-201ENST00000298130 PPP1R15BQ5SWA1 713 aa25.61■■□□□ 1.69
SPTSSA-201ENST00000298130 SH3PXD2AQ5TCZ1 1133 aa25.61■■□□□ 1.69
SPTSSA-201ENST00000298130 MTDHQ86UE4 582 aaKnown RBP25.61■■□□□ 1.69
SPTSSA-201ENST00000298130 ZC3H18Q86VM9 953 aaKnown RBP25.61■■□□□ 1.69
SPTSSA-201ENST00000298130 BRSK2Q8IWQ3 736 aa25.61■■□□□ 1.69
SPTSSA-201ENST00000298130 SCYL3Q8IZE3 742 aa25.61■■□□□ 1.69
SPTSSA-201ENST00000298130 RFWD2Q8NHY2 731 aa25.61■■□□□ 1.69
SPTSSA-201ENST00000298130 RSAD2Q8WXG1 361 aa25.61■■□□□ 1.69
SPTSSA-201ENST00000298130 PTPRN2Q92932 1015 aa25.61■■□□□ 1.69
SPTSSA-201ENST00000298130 GRAMD1AQ96CP6 724 aa25.61■■□□□ 1.69
SPTSSA-201ENST00000298130 CDHR1Q96JP9 859 aa25.61■■□□□ 1.69
SPTSSA-201ENST00000298130 CALN1Q9BXU9 219 aa25.61■■□□□ 1.69
SPTSSA-201ENST00000298130 NIF3L1Q9GZT8 377 aa25.61■■□□□ 1.69
SPTSSA-201ENST00000298130 SUFUQ9UMX1 484 aa25.61■■□□□ 1.69
SPTSSA-201ENST00000298130 COL11A1P12107 1806 aaPredicted RBP25.61■■□□□ 1.69
SPTSSA-201ENST00000298130 ATP2A1O14983 1001 aa25.61■■□□□ 1.69
SPTSSA-201ENST00000298130 B4GALT5O43286 388 aa25.61■■□□□ 1.69
SPTSSA-201ENST00000298130 AVILO75366 819 aa25.61■■□□□ 1.69
SPTSSA-201ENST00000298130 CCND1P24385 295 aa25.61■■□□□ 1.69
SPTSSA-201ENST00000298130 GEMIN4P57678 1058 aaKnown RBP25.61■■□□□ 1.69
SPTSSA-201ENST00000298130 PSMC1P62191 440 aaKnown RBP25.61■■□□□ 1.69
SPTSSA-201ENST00000298130 MMRN1Q13201 1228 aa25.61■■□□□ 1.69
SPTSSA-201ENST00000298130 SEPT7Q16181 437 aaKnown RBP25.61■■□□□ 1.69
SPTSSA-201ENST00000298130 ZNF699Q32M78 642 aa25.61■■□□□ 1.69
SPTSSA-201ENST00000298130 C10orf82Q8WW14 230 aa25.61■■□□□ 1.69
SPTSSA-201ENST00000298130 PCDH9Q9HC56 1237 aa25.61■■□□□ 1.69
SPTSSA-201ENST00000298130 METTL5Q9NRN9 209 aaKnown RBP25.61■■□□□ 1.69
SPTSSA-201ENST00000298130 HMGXB4Q9UGU5 601 aa25.61■■□□□ 1.69
SPTSSA-201ENST00000298130 MCL1Q07820 350 aa25.61■■□□□ 1.69
SPTSSA-201ENST00000298130 TMEM132AQ24JP5 1023 aa25.61■■□□□ 1.69
SPTSSA-201ENST00000298130 CCHCR1Q8TD31 782 aa25.61■■□□□ 1.69
SPTSSA-201ENST00000298130 CPXM1Q96SM3 734 aa25.61■■□□□ 1.69
SPTSSA-201ENST00000298130 FAM167BQ9BTA0 163 aa25.61■■□□□ 1.69
SPTSSA-201ENST00000298130 SYNCQ9H7C4 482 aa25.61■■□□□ 1.69
SPTSSA-201ENST00000298130 DRG1Q9Y295 367 aaKnown RBP25.61■■□□□ 1.69
SPTSSA-201ENST00000298130 PIGRP01833 764 aa25.6■■□□□ 1.69
SPTSSA-201ENST00000298130 ITGAVP06756 1048 aa25.6■■□□□ 1.69
SPTSSA-201ENST00000298130 GMPSP49915 693 aaPredicted RBP25.6■■□□□ 1.69
SPTSSA-201ENST00000298130 PIGHQ14442 188 aaPredicted RBP25.6■■□□□ 1.69
SPTSSA-201ENST00000298130 LONP2Q86WA8 852 aa25.6■■□□□ 1.69
SPTSSA-201ENST00000298130 RFX6Q8HWS3 928 aa25.6■■□□□ 1.69
SPTSSA-201ENST00000298130 PALM2Q8IXS6 379 aa25.6■■□□□ 1.69
SPTSSA-201ENST00000298130 NKD2Q969F2 451 aaPredicted RBP25.6■■□□□ 1.69
SPTSSA-201ENST00000298130 MIEF2Q96C03 454 aa25.6■■□□□ 1.69
SPTSSA-201ENST00000298130 TXLNGQ9NUQ3 528 aa25.6■■□□□ 1.69
SPTSSA-201ENST00000298130 FARP1Q9Y4F1 1045 aaPredicted RBP25.6■■□□□ 1.69
SPTSSA-201ENST00000298130 A0A0G2JND7 137 aa25.6■■□□□ 1.69
SPTSSA-201ENST00000298130 FAM189A1O60320 539 aa25.6■■□□□ 1.69
SPTSSA-201ENST00000298130 MSCO60682 206 aa25.6■■□□□ 1.69
SPTSSA-201ENST00000298130 YARSP54577 528 aaKnown RBP25.6■■□□□ 1.69
SPTSSA-201ENST00000298130 SLC25A11Q02978 314 aaKnown RBP25.6■■□□□ 1.69
SPTSSA-201ENST00000298130 LY6KQ17RY6 165 aa25.6■■□□□ 1.69
SPTSSA-201ENST00000298130 DRICH1Q6PGQ1 229 aaPredicted RBP25.6■■□□□ 1.69
SPTSSA-201ENST00000298130 SLC7A6OSQ96CW6 309 aaPredicted RBP25.6■■□□□ 1.69
SPTSSA-201ENST00000298130 PRR11Q96HE9 360 aaPredicted RBP25.6■■□□□ 1.69
SPTSSA-201ENST00000298130 PAX7P23759 505 aa25.59■■□□□ 1.69
SPTSSA-201ENST00000298130 CCDC142Q17RM4 750 aa25.59■■□□□ 1.69
SPTSSA-201ENST00000298130 LRRC6Q86X45 466 aa25.59■■□□□ 1.69
SPTSSA-201ENST00000298130 TDRPQ86YL5 185 aa25.59■■□□□ 1.69
SPTSSA-201ENST00000298130 TTC8Q8TAM2 541 aa25.59■■□□□ 1.69
SPTSSA-201ENST00000298130 TBC1D10AQ9BXI6 508 aa25.59■■□□□ 1.69
SPTSSA-201ENST00000298130 XPO7Q9UIA9 1087 aaKnown RBP25.59■■□□□ 1.69
SPTSSA-201ENST00000298130 SMG5Q9UPR3 1016 aaKnown RBP25.59■■□□□ 1.69
SPTSSA-201ENST00000298130 SHOC2Q9UQ13 582 aa25.59■■□□□ 1.69
SPTSSA-201ENST00000298130 PSME4Q14997 1843 aa25.59■■□□□ 1.69
SPTSSA-201ENST00000298130 KAT6AQ92794 2004 aa25.59■■□□□ 1.69
SPTSSA-201ENST00000298130 MAGEB2O15479 319 aa25.59■■□□□ 1.69
SPTSSA-201ENST00000298130 ASPAP45381 313 aa25.59■■□□□ 1.69
SPTSSA-201ENST00000298130 STAT5BP51692 787 aa25.59■■□□□ 1.69
SPTSSA-201ENST00000298130 NR1H3Q13133 447 aa25.59■■□□□ 1.69
SPTSSA-201ENST00000298130 DUOXA2Q1HG44 320 aa25.59■■□□□ 1.69
SPTSSA-201ENST00000298130 NLRP9Q7RTR0 991 aa25.59■■□□□ 1.69
SPTSSA-201ENST00000298130 TWNKQ96RR1 684 aa25.59■■□□□ 1.69
SPTSSA-201ENST00000298130 FOXP3Q9BZS1 431 aa25.59■■□□□ 1.69
SPTSSA-201ENST00000298130 SPDYE16A6NNV3 312 aaPredicted RBP25.58■■□□□ 1.69
SPTSSA-201ENST00000298130 ATP2A2P16615 1042 aaKnown RBP25.58■■□□□ 1.69
SPTSSA-201ENST00000298130 CCDC125Q86Z20 511 aa25.58■■□□□ 1.69
SPTSSA-201ENST00000298130 KCTD6Q8NC69 237 aa25.58■■□□□ 1.69
SPTSSA-201ENST00000298130 FAM13CQ8NE31 585 aa25.58■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms