RNA–Protein interactions for RNA: ENST00000297350.8

TNFRSF11B-201, Transcript of TNF receptor superfamily member 11b, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF11B, Length 2,402 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11B-201ENST00000297350 SPRED3Q2MJR0 410 aa10.52□□□□□ -0.73
TNFRSF11B-201ENST00000297350 FAM47CQ5HY64 1035 aa10.52□□□□□ -0.73
TNFRSF11B-201ENST00000297350 KAZNQ674X7 775 aa10.52□□□□□ -0.73
TNFRSF11B-201ENST00000297350 CYP4F22Q6NT55 531 aa10.52□□□□□ -0.73
TNFRSF11B-201ENST00000297350 C4orf22Q6V702 233 aa10.52□□□□□ -0.73
TNFRSF11B-201ENST00000297350 ZBTB33Q86T24 672 aa10.52□□□□□ -0.73
TNFRSF11B-201ENST00000297350 PLCD3Q8N3E9 789 aa10.52□□□□□ -0.73
TNFRSF11B-201ENST00000297350 WDTC1Q8N5D0 677 aa10.52□□□□□ -0.73
TNFRSF11B-201ENST00000297350 MGARPQ8TDB4 240 aa10.52□□□□□ -0.73
TNFRSF11B-201ENST00000297350 APBB2Q92870 758 aa10.52□□□□□ -0.73
TNFRSF11B-201ENST00000297350 VPS37BQ9H9H4 285 aa10.52□□□□□ -0.73
TNFRSF11B-201ENST00000297350 POLR2AP24928 1970 aaKnown RBP10.52□□□□□ -0.73
TNFRSF11B-201ENST00000297350 ZBTB42B2RXF5 422 aa10.51□□□□□ -0.73
TNFRSF11B-201ENST00000297350 CXCL11O14625 94 aa10.51□□□□□ -0.73
TNFRSF11B-201ENST00000297350 HNRNPCL1O60812 293 aaKnown RBP10.51□□□□□ -0.73
TNFRSF11B-201ENST00000297350 RNF8O76064 485 aa10.51□□□□□ -0.73
TNFRSF11B-201ENST00000297350 DESP17661 470 aa10.51□□□□□ -0.73
TNFRSF11B-201ENST00000297350 STIP1P31948 543 aaKnown RBP10.51□□□□□ -0.73
TNFRSF11B-201ENST00000297350 PSMC1P62191 440 aaKnown RBP10.51□□□□□ -0.73
TNFRSF11B-201ENST00000297350 IRX3P78415 501 aaPredicted RBP10.51□□□□□ -0.73
TNFRSF11B-201ENST00000297350 PLCB3Q01970 1234 aa10.51□□□□□ -0.73
TNFRSF11B-201ENST00000297350 MYO1EQ12965 1108 aa10.51□□□□□ -0.73
TNFRSF11B-201ENST00000297350 MPP2Q14168 576 aa10.51□□□□□ -0.73
TNFRSF11B-201ENST00000297350 LRRC14Q15048 493 aa10.51□□□□□ -0.73
TNFRSF11B-201ENST00000297350 ZNF484Q5JVG2 852 aa10.51□□□□□ -0.73
TNFRSF11B-201ENST00000297350 TMEM63BQ5T3F8 832 aa10.51□□□□□ -0.73
TNFRSF11B-201ENST00000297350 CYP4X1Q8N118 509 aa10.51□□□□□ -0.73
TNFRSF11B-201ENST00000297350 CMASQ8NFW8 434 aaPredicted RBP10.51□□□□□ -0.73
TNFRSF11B-201ENST00000297350 RSAD2Q8WXG1 361 aa10.51□□□□□ -0.73
TNFRSF11B-201ENST00000297350 TFAP2BQ92481 460 aa10.51□□□□□ -0.73
TNFRSF11B-201ENST00000297350 USP6NLQ92738 828 aa10.51□□□□□ -0.73
TNFRSF11B-201ENST00000297350 MCRS1Q96EZ8 462 aa10.51□□□□□ -0.73
TNFRSF11B-201ENST00000297350 RAB3IPQ96QF0 476 aaPredicted RBP10.51□□□□□ -0.73
TNFRSF11B-201ENST00000297350 PITPNM3Q9BZ71 974 aa10.51□□□□□ -0.73
TNFRSF11B-201ENST00000297350 ACSS3Q9H6R3 686 aa10.51□□□□□ -0.73
TNFRSF11B-201ENST00000297350 ABCF3Q9NUQ8 709 aa10.51□□□□□ -0.73
TNFRSF11B-201ENST00000297350 ASNSD1Q9NWL6 643 aa10.51□□□□□ -0.73
TNFRSF11B-201ENST00000297350 BTBD7Q9P203 1132 aa10.51□□□□□ -0.73
TNFRSF11B-201ENST00000297350 ZMYND8Q9ULU4 1186 aaPredicted RBP10.51□□□□□ -0.73
TNFRSF11B-201ENST00000297350 COL1A2P08123 1366 aa10.51□□□□□ -0.73
TNFRSF11B-201ENST00000297350 A0A0G2JLL6 359 aaPredicted RBP10.5□□□□□ -0.73
TNFRSF11B-201ENST00000297350 CFAP69A5D8W1 941 aa10.5□□□□□ -0.73
TNFRSF11B-201ENST00000297350 ZNF487B1APH4 448 aa10.5□□□□□ -0.73
TNFRSF11B-201ENST00000297350 TM9SF1O15321 606 aa10.5□□□□□ -0.73
TNFRSF11B-201ENST00000297350 LRCH4O75427 683 aa10.5□□□□□ -0.73
TNFRSF11B-201ENST00000297350 USP2O75604 605 aaPredicted RBP10.5□□□□□ -0.73
TNFRSF11B-201ENST00000297350 TOMM70O94826 608 aa10.5□□□□□ -0.73
TNFRSF11B-201ENST00000297350 UBOX5O94941 541 aa10.5□□□□□ -0.73
TNFRSF11B-201ENST00000297350 ATP6V1G2O95670 118 aa10.5□□□□□ -0.73
TNFRSF11B-201ENST00000297350 VDRP11473 427 aa10.5□□□□□ -0.73
TNFRSF11B-201ENST00000297350 CETPP11597 493 aa10.5□□□□□ -0.73
TNFRSF11B-201ENST00000297350 ALADP13716 330 aa10.5□□□□□ -0.73
TNFRSF11B-201ENST00000297350 NQO1P15559 274 aaKnown RBP10.5□□□□□ -0.73
TNFRSF11B-201ENST00000297350 KRT15P19012 456 aa10.5□□□□□ -0.73
TNFRSF11B-201ENST00000297350 KDELR1P24390 212 aa10.5□□□□□ -0.73
TNFRSF11B-201ENST00000297350 GCAP28676 217 aa10.5□□□□□ -0.73
TNFRSF11B-201ENST00000297350 SNX16P57768 344 aa10.5□□□□□ -0.73
TNFRSF11B-201ENST00000297350 NCALDP61601 193 aa10.5□□□□□ -0.73
TNFRSF11B-201ENST00000297350 MKRN4PQ13434 485 aaPredicted RBP10.5□□□□□ -0.73
TNFRSF11B-201ENST00000297350 VGLL4Q14135 290 aa10.5□□□□□ -0.73
TNFRSF11B-201ENST00000297350 WDR72Q3MJ13 1102 aa10.5□□□□□ -0.73
TNFRSF11B-201ENST00000297350 PTPN20Q4JDL3 420 aa10.5□□□□□ -0.73
TNFRSF11B-201ENST00000297350 DAB2IPQ5VWQ8 1189 aa10.5□□□□□ -0.73
TNFRSF11B-201ENST00000297350 DENND1BQ6P3S1 775 aa10.5□□□□□ -0.73
TNFRSF11B-201ENST00000297350 PRRT2Q7Z6L0 340 aaPredicted RBP10.5□□□□□ -0.73
TNFRSF11B-201ENST00000297350 NCAPG2Q86XI2 1143 aa10.5□□□□□ -0.73
TNFRSF11B-201ENST00000297350 ZBED8Q8IZ13 594 aa10.5□□□□□ -0.73
TNFRSF11B-201ENST00000297350 PDIK1LQ8N165 341 aa10.5□□□□□ -0.73
TNFRSF11B-201ENST00000297350 SLC4A11Q8NBS3 891 aa10.5□□□□□ -0.73
TNFRSF11B-201ENST00000297350 DHRS4Q9BTZ2 278 aa10.5□□□□□ -0.73
TNFRSF11B-201ENST00000297350 SYNCQ9H7C4 482 aa10.5□□□□□ -0.73
TNFRSF11B-201ENST00000297350 ECT2Q9H8V3 914 aa10.5□□□□□ -0.73
TNFRSF11B-201ENST00000297350 DNAJC17Q9NVM6 304 aaKnown RBP10.5□□□□□ -0.73
TNFRSF11B-201ENST00000297350 USH1CQ9Y6N9 552 aa10.5□□□□□ -0.73
TNFRSF11B-201ENST00000297350 MCF2LO15068 1137 aa10.5□□□□□ -0.73
TNFRSF11B-201ENST00000297350 WFS1O76024 890 aa10.5□□□□□ -0.73
TNFRSF11B-201ENST00000297350 SRGAP2CP0DJJ0 459 aa10.5□□□□□ -0.73
TNFRSF11B-201ENST00000297350 CD19P15391 556 aa10.5□□□□□ -0.73
TNFRSF11B-201ENST00000297350 YARSP54577 528 aaKnown RBP10.5□□□□□ -0.73
TNFRSF11B-201ENST00000297350 RAD23BP54727 409 aa10.5□□□□□ -0.73
TNFRSF11B-201ENST00000297350 MBTD1Q05BQ5 628 aa10.5□□□□□ -0.73
TNFRSF11B-201ENST00000297350 PDIA2Q13087 525 aaKnown RBP10.5□□□□□ -0.73
TNFRSF11B-201ENST00000297350 XYLT1Q86Y38 959 aa10.5□□□□□ -0.73
TNFRSF11B-201ENST00000297350 NAT8LQ8N9F0 302 aa10.5□□□□□ -0.73
TNFRSF11B-201ENST00000297350 PYROXD1Q8WU10 500 aa10.5□□□□□ -0.73
TNFRSF11B-201ENST00000297350 L3MBTL3Q96JM7 780 aaPredicted RBP10.5□□□□□ -0.73
TNFRSF11B-201ENST00000297350 CDT1Q9H211 546 aa10.5□□□□□ -0.73
TNFRSF11B-201ENST00000297350 KLHL11Q9NVR0 708 aa10.5□□□□□ -0.73
TNFRSF11B-201ENST00000297350 TBK1Q9UHD2 729 aa10.5□□□□□ -0.73
TNFRSF11B-201ENST00000297350 ATP2C2O75185 946 aa10.49□□□□□ -0.73
TNFRSF11B-201ENST00000297350 CILPO75339 1184 aa10.49□□□□□ -0.73
TNFRSF11B-201ENST00000297350 TCF4P15884 667 aa10.49□□□□□ -0.73
TNFRSF11B-201ENST00000297350 CREB1P16220 341 aa10.49□□□□□ -0.73
TNFRSF11B-201ENST00000297350 RFC1P35251 1148 aaPredicted RBP10.49□□□□□ -0.73
TNFRSF11B-201ENST00000297350 IREB2P48200 963 aaKnown RBP10.49□□□□□ -0.73
TNFRSF11B-201ENST00000297350 CTCFP49711 727 aaPredicted RBP10.49□□□□□ -0.73
TNFRSF11B-201ENST00000297350 OTUD4Q01804 1114 aaKnown RBP10.49□□□□□ -0.73
TNFRSF11B-201ENST00000297350 RNASELQ05823 741 aaKnown RBP10.49□□□□□ -0.73
TNFRSF11B-201ENST00000297350 PTPN11Q06124 597 aaPredicted RBP10.49□□□□□ -0.73
TNFRSF11B-201ENST00000297350 INCA1Q0VD86 236 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms