RNA–Protein interactions for RNA: ENST00000297267.13

FNDC1-201, Transcript of fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC1, Length 6,552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC1-201ENST00000297267 YAF2Q8IY57 180 aa16.07■□□□□ 0.16
FNDC1-201ENST00000297267 ZNF786Q8N393 782 aa16.07■□□□□ 0.16
FNDC1-201ENST00000297267 ZMAT2Q96NC0 199 aaKnown RBP16.07■□□□□ 0.16
FNDC1-201ENST00000297267 GPR63Q9BZJ6 419 aa16.07■□□□□ 0.16
FNDC1-201ENST00000297267 NUDT5Q9UKK9 219 aa16.07■□□□□ 0.16
FNDC1-201ENST00000297267 ACAT1P24752 427 aaKnown RBP16.07■□□□□ 0.16
FNDC1-201ENST00000297267 ATN1P54259 1190 aaPredicted RBP16.07■□□□□ 0.16
FNDC1-201ENST00000297267 NBPF20Q3BBV1 942 aa16.07■□□□□ 0.16
FNDC1-201ENST00000297267 NT5DC3Q86UY8 548 aa16.07■□□□□ 0.16
FNDC1-201ENST00000297267 PARP8Q8N3A8 854 aa16.07■□□□□ 0.16
FNDC1-201ENST00000297267 PRCCQ92733 491 aaPredicted RBP16.07■□□□□ 0.16
FNDC1-201ENST00000297267 PGLYRP2Q96PD5 576 aa16.07■□□□□ 0.16
FNDC1-201ENST00000297267 NFIBO00712 420 aa16.06■□□□□ 0.16
FNDC1-201ENST00000297267 MYO1DO94832 1006 aa16.06■□□□□ 0.16
FNDC1-201ENST00000297267 CPSF4O95639 269 aaKnown RBP16.06■□□□□ 0.16
FNDC1-201ENST00000297267 ZCCHC23Q6ZST2 131 aa16.06■□□□□ 0.16
FNDC1-201ENST00000297267 JADE3Q92613 823 aa16.06■□□□□ 0.16
FNDC1-201ENST00000297267 THAP11Q96EK4 314 aa16.06■□□□□ 0.16
FNDC1-201ENST00000297267 ERP44Q9BS26 406 aa16.06■□□□□ 0.16
FNDC1-201ENST00000297267 TMCC1O94876 653 aa16.06■□□□□ 0.16
FNDC1-201ENST00000297267 ACAD10Q6JQN1 1059 aa16.06■□□□□ 0.16
FNDC1-201ENST00000297267 ZNF571Q7Z3V5 609 aaPredicted RBP16.06■□□□□ 0.16
FNDC1-201ENST00000297267 E2F7Q96AV8 911 aa16.06■□□□□ 0.16
FNDC1-201ENST00000297267 CNDP1Q96KN2 507 aa16.06■□□□□ 0.16
FNDC1-201ENST00000297267 GLI1P08151 1106 aa16.06■□□□□ 0.16
FNDC1-201ENST00000297267 SLC1A1P43005 524 aa16.06■□□□□ 0.16
FNDC1-201ENST00000297267 GEMIN4P57678 1058 aaKnown RBP16.06■□□□□ 0.16
FNDC1-201ENST00000297267 NR1H3Q13133 447 aa16.06■□□□□ 0.16
FNDC1-201ENST00000297267 RABL6Q3YEC7 729 aaPredicted RBP16.06■□□□□ 0.16
FNDC1-201ENST00000297267 PTAR1Q7Z6K3 402 aaPredicted RBP16.06■□□□□ 0.16
FNDC1-201ENST00000297267 NMD3Q96D46 503 aaKnown RBP16.06■□□□□ 0.16
FNDC1-201ENST00000297267 ZBTB10Q96DT7 871 aa16.06■□□□□ 0.16
FNDC1-201ENST00000297267 NT5C1AQ9BXI3 368 aa16.06■□□□□ 0.16
FNDC1-201ENST00000297267 NOD2Q9HC29 1040 aa16.06■□□□□ 0.16
FNDC1-201ENST00000297267 ARHGAP31Q2M1Z3 1444 aa16.06■□□□□ 0.16
FNDC1-201ENST00000297267 ITIH2P19823 946 aa16.06■□□□□ 0.16
FNDC1-201ENST00000297267 RFX5P48382 616 aaPredicted RBP16.06■□□□□ 0.16
FNDC1-201ENST00000297267 PDIA5Q14554 519 aa16.06■□□□□ 0.16
FNDC1-201ENST00000297267 CCDC60Q8IWA6 550 aaPredicted RBP16.06■□□□□ 0.16
FNDC1-201ENST00000297267 GLIS3Q8NEA6 775 aa16.06■□□□□ 0.16
FNDC1-201ENST00000297267 ZSCAN18Q8TBC5 510 aaPredicted RBP16.06■□□□□ 0.16
FNDC1-201ENST00000297267 RANBP17Q9H2T7 1088 aaKnown RBP16.06■□□□□ 0.16
FNDC1-201ENST00000297267 TMEM8AQ9HCN3 771 aa16.06■□□□□ 0.16
FNDC1-201ENST00000297267 NMRK2Q9NPI5 230 aa16.06■□□□□ 0.16
FNDC1-201ENST00000297267 ITIH6Q6UXX5 1313 aa16.06■□□□□ 0.16
FNDC1-201ENST00000297267 NR5A2O00482 541 aa16.06■□□□□ 0.16
FNDC1-201ENST00000297267 PIGHQ14442 188 aaPredicted RBP16.06■□□□□ 0.16
FNDC1-201ENST00000297267 ZNF34Q8IZ26 560 aa16.06■□□□□ 0.16
FNDC1-201ENST00000297267 ATXN3LQ9H3M9 355 aa16.06■□□□□ 0.16
FNDC1-201ENST00000297267 PCDHB7Q9Y5E2 793 aa16.06■□□□□ 0.16
FNDC1-201ENST00000297267 PCDHAC2Q9Y5I4 1007 aa16.06■□□□□ 0.16
FNDC1-201ENST00000297267 NCAPD2Q15021 1401 aa16.06■□□□□ 0.16
FNDC1-201ENST00000297267 CCT8L1PA6NM43 557 aa16.05■□□□□ 0.16
FNDC1-201ENST00000297267 C5orf58C9J3I9 102 aa16.05■□□□□ 0.16
FNDC1-201ENST00000297267 H0Y626 953 aa16.05■□□□□ 0.16
FNDC1-201ENST00000297267 PCNAP12004 261 aa16.05■□□□□ 0.16
FNDC1-201ENST00000297267 TAF1CQ15572 869 aaPredicted RBP16.05■□□□□ 0.16
FNDC1-201ENST00000297267 SAPCD2Q86UD0 394 aa16.05■□□□□ 0.16
FNDC1-201ENST00000297267 CCT7Q99832 543 aa16.05■□□□□ 0.16
FNDC1-201ENST00000297267 CCSER1Q9C0I3 900 aa16.05■□□□□ 0.16
FNDC1-201ENST00000297267 HERC5Q9UII4 1024 aaKnown RBP16.05■□□□□ 0.16
FNDC1-201ENST00000297267 PACSIN3Q9UKS6 424 aa16.05■□□□□ 0.16
FNDC1-201ENST00000297267 VN1R5Q7Z5H4 357 aa16.05■□□□□ 0.16
FNDC1-201ENST00000297267 TFAP2DQ7Z6R9 452 aa16.05■□□□□ 0.16
FNDC1-201ENST00000297267 PHF21BQ96EK2 531 aa16.05■□□□□ 0.16
FNDC1-201ENST00000297267 WDCPQ9H6R7 721 aa16.05■□□□□ 0.16
FNDC1-201ENST00000297267 CACNA2D2Q9NY47 1150 aa16.05■□□□□ 0.16
FNDC1-201ENST00000297267 MAP3K20Q9NYL2 800 aaKnown RBP16.05■□□□□ 0.16
FNDC1-201ENST00000297267 TBC1D4O60343 1298 aa16.05■□□□□ 0.16
FNDC1-201ENST00000297267 TNIP3Q96KP6 325 aa16.05■□□□□ 0.16
FNDC1-201ENST00000297267 ACSS2Q9NR19 701 aa16.05■□□□□ 0.16
FNDC1-201ENST00000297267 WDR47O94967 919 aa16.05■□□□□ 0.16
FNDC1-201ENST00000297267 SERPINB3P29508 390 aa16.05■□□□□ 0.16
FNDC1-201ENST00000297267 FAM182AQ5T1J6 154 aa16.05■□□□□ 0.16
FNDC1-201ENST00000297267 TRIM72Q6ZMU5 477 aa16.05■□□□□ 0.16
FNDC1-201ENST00000297267 ISCUQ9H1K1 167 aa16.05■□□□□ 0.16
FNDC1-201ENST00000297267 POMCP01189 267 aa16.05■□□□□ 0.16
FNDC1-201ENST00000297267 EPHB2P29323 1055 aa16.05■□□□□ 0.16
FNDC1-201ENST00000297267 CELF2O95319 508 aaKnown RBP16.04■□□□□ 0.16
FNDC1-201ENST00000297267 CDH8P55286 799 aa16.04■□□□□ 0.16
FNDC1-201ENST00000297267 RPL10AP62906 217 aaKnown RBP16.04■□□□□ 0.16
FNDC1-201ENST00000297267 CDC16Q13042 620 aa16.04■□□□□ 0.16
FNDC1-201ENST00000297267 CUL2Q13617 745 aa16.04■□□□□ 0.16
FNDC1-201ENST00000297267 ALFQ53S48 1182 aa16.04■□□□□ 0.16
FNDC1-201ENST00000297267 DNAJC9Q8WXX5 260 aa16.04■□□□□ 0.16
FNDC1-201ENST00000297267 ALDH8A1Q9H2A2 487 aaPredicted RBP16.04■□□□□ 0.16
FNDC1-201ENST00000297267 GTF2A1LQ9UNN4 478 aa16.04■□□□□ 0.16
FNDC1-201ENST00000297267 ARHGEF37A1IGU5 675 aa16.04■□□□□ 0.16
FNDC1-201ENST00000297267 CFAP73A6NFT4 308 aa16.04■□□□□ 0.16
FNDC1-201ENST00000297267 RBP3P10745 1247 aa16.04■□□□□ 0.16
FNDC1-201ENST00000297267 CRADDP78560 199 aa16.04■□□□□ 0.16
FNDC1-201ENST00000297267 ANKS1AQ92625 1134 aa16.04■□□□□ 0.16
FNDC1-201ENST00000297267 VMP1Q96GC9 406 aa16.04■□□□□ 0.16
FNDC1-201ENST00000297267 LACRTQ9GZZ8 138 aa16.04■□□□□ 0.16
FNDC1-201ENST00000297267 RNF112Q9ULX5 631 aa16.04■□□□□ 0.16
FNDC1-201ENST00000297267 ZFXP17010 805 aaPredicted RBP16.04■□□□□ 0.16
FNDC1-201ENST00000297267 CYP11B2P19099 503 aa16.04■□□□□ 0.16
FNDC1-201ENST00000297267 TGM2P21980 687 aa16.04■□□□□ 0.16
FNDC1-201ENST00000297267 TRPC1P48995 793 aa16.04■□□□□ 0.16
FNDC1-201ENST00000297267 POM121L1PQ3SYA9 428 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms