RNA–Protein interactions for RNA: ENST00000296271.3

RHO-201, Transcript of rhodopsin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHO, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHO-201ENST00000296271 PAEPP09466 180 aa12.4□□□□□ -0.42
RHO-201ENST00000296271 CDH5P33151 784 aaPredicted RBP12.4□□□□□ -0.42
RHO-201ENST00000296271 MAN1A1P33908 653 aa12.4□□□□□ -0.42
RHO-201ENST00000296271 PHKA2P46019 1235 aa12.4□□□□□ -0.42
RHO-201ENST00000296271 OTUD4Q01804 1114 aaKnown RBP12.4□□□□□ -0.42
RHO-201ENST00000296271 SNAPC2Q13487 334 aa12.4□□□□□ -0.42
RHO-201ENST00000296271 HIC1Q14526 733 aa12.4□□□□□ -0.42
RHO-201ENST00000296271 CNGA2Q16280 664 aa12.4□□□□□ -0.42
RHO-201ENST00000296271 TFDP3Q5H9I0 405 aa12.4□□□□□ -0.42
RHO-201ENST00000296271 LDLRAD1Q5T700 205 aa12.4□□□□□ -0.42
RHO-201ENST00000296271 MTHFD1LQ6UB35 978 aa12.4□□□□□ -0.42
RHO-201ENST00000296271 TRMT10CQ7L0Y3 403 aaKnown RBP12.4□□□□□ -0.42
RHO-201ENST00000296271 CCDC33Q8N5R6 958 aa12.4□□□□□ -0.42
RHO-201ENST00000296271 ACTL9Q8TC94 416 aa12.4□□□□□ -0.42
RHO-201ENST00000296271 GRK7Q8WTQ7 553 aa12.4□□□□□ -0.42
RHO-201ENST00000296271 BRI3BPQ8WY22 251 aa12.4□□□□□ -0.42
RHO-201ENST00000296271 RUNDC3BQ96NL0 473 aa12.4□□□□□ -0.42
RHO-201ENST00000296271 MPHOSPH6Q99547 160 aaKnown RBP12.4□□□□□ -0.42
RHO-201ENST00000296271 TUT1Q9H6E5 874 aaKnown RBP12.4□□□□□ -0.42
RHO-201ENST00000296271 KCNK9Q9NPC2 374 aa12.4□□□□□ -0.42
RHO-201ENST00000296271 FAM49BQ9NUQ9 324 aa12.4□□□□□ -0.42
RHO-201ENST00000296271 GPATCH2LQ9NWQ4 482 aa12.4□□□□□ -0.42
RHO-201ENST00000296271 HTTP42858 3142 aa12.4□□□□□ -0.42
RHO-201ENST00000296271 PLXNA1Q9UIW2 1896 aa12.4□□□□□ -0.42
RHO-201ENST00000296271 KAT6AQ92794 2004 aa12.4□□□□□ -0.42
RHO-201ENST00000296271 TMEM120BA0PK00 339 aa12.4□□□□□ -0.42
RHO-201ENST00000296271 ASAP2O43150 1006 aa12.4□□□□□ -0.42
RHO-201ENST00000296271 GAS2O43903 313 aaKnown RBP12.4□□□□□ -0.42
RHO-201ENST00000296271 OASLQ15646 514 aaKnown RBP12.4□□□□□ -0.42
RHO-201ENST00000296271 CCDC142Q17RM4 750 aa12.4□□□□□ -0.42
RHO-201ENST00000296271 MSS51Q4VC12 460 aa12.4□□□□□ -0.42
RHO-201ENST00000296271 TAX1BP1Q86VP1 789 aa12.4□□□□□ -0.42
RHO-201ENST00000296271 SRRM1Q8IYB3 904 aaKnown RBP12.4□□□□□ -0.42
RHO-201ENST00000296271 CCDC13Q8IYE1 715 aa12.4□□□□□ -0.42
RHO-201ENST00000296271 OTUD6BQ8N6M0 293 aa12.4□□□□□ -0.42
RHO-201ENST00000296271 ALLCQ8N6M5 410 aa12.4□□□□□ -0.42
RHO-201ENST00000296271 FBXO41Q8TF61 875 aa12.4□□□□□ -0.42
RHO-201ENST00000296271 MAIP1Q8WWC4 291 aa12.4□□□□□ -0.42
RHO-201ENST00000296271 C18orf25Q96B23 403 aaPredicted RBP12.4□□□□□ -0.42
RHO-201ENST00000296271 CHMP6Q96FZ7 201 aa12.4□□□□□ -0.42
RHO-201ENST00000296271 TMEM176AQ96HP8 235 aa12.4□□□□□ -0.42
RHO-201ENST00000296271 MS4A4AQ96JQ5 239 aa12.4□□□□□ -0.42
RHO-201ENST00000296271 APOL6Q9BWW8 343 aa12.4□□□□□ -0.42
RHO-201ENST00000296271 EIF2AQ9BY44 585 aaKnown RBP12.4□□□□□ -0.42
RHO-201ENST00000296271 PRMT7Q9NVM4 692 aaPredicted RBP12.4□□□□□ -0.42
RHO-201ENST00000296271 NAALADL1Q9UQQ1 740 aa12.4□□□□□ -0.42
RHO-201ENST00000296271 CAPN7Q9Y6W3 813 aa12.4□□□□□ -0.42
RHO-201ENST00000296271 ASB14A6NK59 587 aa12.39□□□□□ -0.43
RHO-201ENST00000296271 SIGLEC16A6NMB1 481 aa12.39□□□□□ -0.43
RHO-201ENST00000296271 A6NNZ2 444 aa12.39□□□□□ -0.43
RHO-201ENST00000296271 DNM1LO00429 736 aa12.39□□□□□ -0.43
RHO-201ENST00000296271 TJP3O95049 919 aa12.39□□□□□ -0.43
RHO-201ENST00000296271 GCAP28676 217 aa12.39□□□□□ -0.43
RHO-201ENST00000296271 MIPP30301 263 aa12.39□□□□□ -0.43
RHO-201ENST00000296271 GBP1P32455 592 aa12.39□□□□□ -0.43
RHO-201ENST00000296271 GPD2P43304 727 aa12.39□□□□□ -0.43
RHO-201ENST00000296271 MAGEA4P43358 317 aa12.39□□□□□ -0.43
RHO-201ENST00000296271 YWHAEP62258 255 aaKnown RBP12.39□□□□□ -0.43
RHO-201ENST00000296271 EFTUD2Q15029 972 aaKnown RBP eCLIP12.39□□□□□ -0.43
RHO-201ENST00000296271 TUBB8Q3ZCM7 444 aa12.39□□□□□ -0.43
RHO-201ENST00000296271 ARMC9Q7Z3E5 817 aa12.39□□□□□ -0.43
RHO-201ENST00000296271 UNC45BQ8IWX7 931 aa12.39□□□□□ -0.43
RHO-201ENST00000296271 CCDC89Q8N998 374 aa12.39□□□□□ -0.43
RHO-201ENST00000296271 RBM41Q96IZ5 413 aaKnown RBP12.39□□□□□ -0.43
RHO-201ENST00000296271 ELAC2Q9BQ52 826 aaKnown RBP12.39□□□□□ -0.43
RHO-201ENST00000296271 SNTG2Q9NY99 539 aa12.39□□□□□ -0.43
RHO-201ENST00000296271 CCL15-CCL14A0A0B4J2E2 113 aa12.39□□□□□ -0.43
RHO-201ENST00000296271 E5RJQ4 531 aa12.39□□□□□ -0.43
RHO-201ENST00000296271 HGSO14964 777 aaPredicted RBP12.39□□□□□ -0.43
RHO-201ENST00000296271 SPAG7O75391 227 aa12.39□□□□□ -0.43
RHO-201ENST00000296271 VIMP08670 466 aaKnown RBP12.39□□□□□ -0.43
RHO-201ENST00000296271 TFE3P19532 575 aaPredicted RBP12.39□□□□□ -0.43
RHO-201ENST00000296271 IGFBP6P24592 240 aaPredicted RBP12.39□□□□□ -0.43
RHO-201ENST00000296271 ATP11AP98196 1134 aa12.39□□□□□ -0.43
RHO-201ENST00000296271 LAMC2Q13753 1193 aa12.39□□□□□ -0.43
RHO-201ENST00000296271 PIGHQ14442 188 aaPredicted RBP12.39□□□□□ -0.43
RHO-201ENST00000296271 TMEM132DQ14C87 1099 aa12.39□□□□□ -0.43
RHO-201ENST00000296271 SURF1Q15526 300 aa12.39□□□□□ -0.43
RHO-201ENST00000296271 GRIK4Q16099 956 aa12.39□□□□□ -0.43
RHO-201ENST00000296271 CCL15Q16663 113 aa12.39□□□□□ -0.43
RHO-201ENST00000296271 FAM102AQ5T9C2 384 aaPredicted RBP12.39□□□□□ -0.43
RHO-201ENST00000296271 KIF12Q96FN5 646 aa12.39□□□□□ -0.43
RHO-201ENST00000296271 MRPL45Q9BRJ2 306 aaKnown RBP12.39□□□□□ -0.43
RHO-201ENST00000296271 TMEM109Q9BVC6 243 aa12.39□□□□□ -0.43
RHO-201ENST00000296271 CALN1Q9BXU9 219 aa12.39□□□□□ -0.43
RHO-201ENST00000296271 B3GNT5Q9BYG0 378 aa12.39□□□□□ -0.43
RHO-201ENST00000296271 DPP3Q9NY33 737 aa12.39□□□□□ -0.43
RHO-201ENST00000296271 TUBGCP4Q9UGJ1 667 aa12.39□□□□□ -0.43
RHO-201ENST00000296271 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.39□□□□□ -0.43
RHO-201ENST00000296271 CEP83Q9Y592 693 aa12.39□□□□□ -0.43
RHO-201ENST00000296271 A0A087WUV0 522 aaPredicted RBP12.38□□□□□ -0.43
RHO-201ENST00000296271 POC1B-GALNT4F8VUJ3 575 aa12.38□□□□□ -0.43
RHO-201ENST00000296271 DNALI1O14645 258 aaPredicted RBP12.38□□□□□ -0.43
RHO-201ENST00000296271 GABBR2O75899 941 aa12.38□□□□□ -0.43
RHO-201ENST00000296271 NPTXRO95502 500 aa12.38□□□□□ -0.43
RHO-201ENST00000296271 PFKMP08237 780 aa12.38□□□□□ -0.43
RHO-201ENST00000296271 KDELR1P24390 212 aa12.38□□□□□ -0.43
RHO-201ENST00000296271 AKAP5P24588 427 aa12.38□□□□□ -0.43
RHO-201ENST00000296271 SLC26A2P50443 739 aa12.38□□□□□ -0.43
RHO-201ENST00000296271 VCPP55072 806 aaKnown RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms