RNA–Protein interactions for RNA: ENST00000293968.11

CCNF-201, Transcript of cyclin F, humanhuman

TSL 1 (best)

Gene CCNF, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-201ENST00000293968 RABGEF1Q9UJ41 708 aa15.43■□□□□ 0.06
CCNF-201ENST00000293968 SHOC2Q9UQ13 582 aa15.43■□□□□ 0.06
CCNF-201ENST00000293968 KIF13BQ9NQT8 1826 aa15.43■□□□□ 0.06
CCNF-201ENST00000293968 COPEO14579 308 aa15.43■□□□□ 0.06
CCNF-201ENST00000293968 GCLCP48506 637 aaPredicted RBP15.43■□□□□ 0.06
CCNF-201ENST00000293968 CACNA2D1P54289 1103 aa15.43■□□□□ 0.06
CCNF-201ENST00000293968 ALDH18A1P54886 795 aaKnown RBP15.43■□□□□ 0.06
CCNF-201ENST00000293968 ARHGAP24Q8N264 748 aa15.43■□□□□ 0.06
CCNF-201ENST00000293968 KCTD6Q8NC69 237 aa15.43■□□□□ 0.06
CCNF-201ENST00000293968 TARS2Q9BW92 718 aaKnown RBP15.43■□□□□ 0.06
CCNF-201ENST00000293968 NUB1Q9Y5A7 615 aa15.43■□□□□ 0.06
CCNF-201ENST00000293968 PCDHA10Q9Y5I2 948 aa15.43■□□□□ 0.06
CCNF-201ENST00000293968 IQANK1A0A1B0GTG1 560 aa15.42■□□□□ 0.06
CCNF-201ENST00000293968 EXTL3O43909 919 aa15.42■□□□□ 0.06
CCNF-201ENST00000293968 MAP3K6O95382 1288 aa15.42■□□□□ 0.06
CCNF-201ENST00000293968 FAAP100Q0VG06 881 aa15.42■□□□□ 0.06
CCNF-201ENST00000293968 RASA2Q15283 850 aa15.42■□□□□ 0.06
CCNF-201ENST00000293968 GPAT2Q6NUI2 795 aa15.42■□□□□ 0.06
CCNF-201ENST00000293968 EMC1Q8N766 993 aa15.42■□□□□ 0.06
CCNF-201ENST00000293968 ZNF333Q96JL9 665 aa15.42■□□□□ 0.06
CCNF-201ENST00000293968 CLPTM1LQ96KA5 538 aa15.42■□□□□ 0.06
CCNF-201ENST00000293968 TCRBV7S3A2A0A539 114 aa15.42■□□□□ 0.06
CCNF-201ENST00000293968 CLUHO75153 1309 aa15.42■□□□□ 0.06
CCNF-201ENST00000293968 TBX10O75333 385 aa15.42■□□□□ 0.06
CCNF-201ENST00000293968 SNUPNO95149 360 aaKnown RBP15.42■□□□□ 0.06
CCNF-201ENST00000293968 ICAM1P05362 532 aa15.42■□□□□ 0.06
CCNF-201ENST00000293968 ORC1Q13415 861 aa15.42■□□□□ 0.06
CCNF-201ENST00000293968 NCOA4Q13772 614 aa15.42■□□□□ 0.06
CCNF-201ENST00000293968 WDR72Q3MJ13 1102 aa15.42■□□□□ 0.06
CCNF-201ENST00000293968 CFAP157Q5JU67 520 aa15.42■□□□□ 0.06
CCNF-201ENST00000293968 ARID3BQ8IVW6 561 aaPredicted RBP15.42■□□□□ 0.06
CCNF-201ENST00000293968 SMC1BQ8NDV3 1235 aa15.42■□□□□ 0.06
CCNF-201ENST00000293968 MECRQ9BV79 373 aa15.42■□□□□ 0.06
CCNF-201ENST00000293968 PCDH9Q9HC56 1237 aa15.42■□□□□ 0.06
CCNF-201ENST00000293968 NXF1Q9UBU9 619 aaKnown RBP15.42■□□□□ 0.06
CCNF-201ENST00000293968 LRCH1Q9Y2L9 728 aa15.42■□□□□ 0.06
CCNF-201ENST00000293968 K7ERI5 159 aa15.42■□□□□ 0.06
CCNF-201ENST00000293968 KRT76Q01546 638 aa15.42■□□□□ 0.06
CCNF-201ENST00000293968 FAXCQ5TGI0 409 aa15.42■□□□□ 0.06
CCNF-201ENST00000293968 PLEKHA7Q6IQ23 1121 aa15.42■□□□□ 0.06
CCNF-201ENST00000293968 DARS2Q6PI48 645 aaKnown RBP15.42■□□□□ 0.06
CCNF-201ENST00000293968 TDRPQ86YL5 185 aa15.42■□□□□ 0.06
CCNF-201ENST00000293968 OR5B17Q8NGF7 314 aa15.42■□□□□ 0.06
CCNF-201ENST00000293968 ACAP3Q96P50 834 aa15.42■□□□□ 0.06
CCNF-201ENST00000293968 SMYD3Q9H7B4 428 aa15.42■□□□□ 0.06
CCNF-201ENST00000293968 PTPRJQ12913 1337 aa15.41■□□□□ 0.06
CCNF-201ENST00000293968 hCG_1818297A0A087WSY0 165 aa15.41■□□□□ 0.06
CCNF-201ENST00000293968 CAP2P40123 477 aa15.41■□□□□ 0.06
CCNF-201ENST00000293968 ELK3P41970 407 aa15.41■□□□□ 0.06
CCNF-201ENST00000293968 OSTNP61366 133 aa15.41■□□□□ 0.06
CCNF-201ENST00000293968 ATP6V0A1Q93050 837 aa15.41■□□□□ 0.06
CCNF-201ENST00000293968 MTO1Q9Y2Z2 717 aaKnown RBP15.41■□□□□ 0.06
CCNF-201ENST00000293968 ZBTB12Q9Y330 459 aaPredicted RBP15.41■□□□□ 0.06
CCNF-201ENST00000293968 PMM2O15305 246 aa15.41■□□□□ 0.06
CCNF-201ENST00000293968 AVILO75366 819 aa15.41■□□□□ 0.06
CCNF-201ENST00000293968 FAM155BO75949 473 aa15.41■□□□□ 0.06
CCNF-201ENST00000293968 AMPD1P23109 780 aa15.41■□□□□ 0.06
CCNF-201ENST00000293968 CDK16Q00536 496 aa15.41■□□□□ 0.06
CCNF-201ENST00000293968 PTP4A2Q12974 167 aa15.41■□□□□ 0.06
CCNF-201ENST00000293968 TRPC3Q13507 836 aa15.41■□□□□ 0.06
CCNF-201ENST00000293968 C1orf146Q5VVC0 180 aa15.41■□□□□ 0.06
CCNF-201ENST00000293968 ENDOVQ8N8Q3 282 aaKnown RBP15.41■□□□□ 0.06
CCNF-201ENST00000293968 TMEM35BQ8NCS4 154 aa15.41■□□□□ 0.06
CCNF-201ENST00000293968 CCDC110Q8TBZ0 833 aa15.41■□□□□ 0.06
CCNF-201ENST00000293968 NMUR2Q9GZQ4 415 aa15.41■□□□□ 0.06
CCNF-201ENST00000293968 ANKEF1Q9NU02 776 aa15.41■□□□□ 0.06
CCNF-201ENST00000293968 TAS2R1Q9NYW7 299 aa15.41■□□□□ 0.06
CCNF-201ENST00000293968 UBIAD1Q9Y5Z9 338 aa15.41■□□□□ 0.06
CCNF-201ENST00000293968 H7C0C1 242 aa15.41■□□□□ 0.06
CCNF-201ENST00000293968 PIK3R2O00459 728 aa15.41■□□□□ 0.06
CCNF-201ENST00000293968 CALB1P05937 261 aa15.41■□□□□ 0.06
CCNF-201ENST00000293968 KRT19P08727 400 aa15.41■□□□□ 0.06
CCNF-201ENST00000293968 RPL22P35268 128 aaKnown RBP15.41■□□□□ 0.06
CCNF-201ENST00000293968 ATP5OP48047 213 aa15.41■□□□□ 0.06
CCNF-201ENST00000293968 EIF3EP60228 445 aaKnown RBP15.41■□□□□ 0.06
CCNF-201ENST00000293968 OGDHQ02218 1023 aa15.41■□□□□ 0.06
CCNF-201ENST00000293968 KBTBD12Q3ZCT8 623 aa15.41■□□□□ 0.06
CCNF-201ENST00000293968 ZACNQ401N2 412 aa15.41■□□□□ 0.06
CCNF-201ENST00000293968 EFHC2Q5JST6 749 aa15.41■□□□□ 0.06
CCNF-201ENST00000293968 RELL1Q8IUW5 271 aa15.41■□□□□ 0.06
CCNF-201ENST00000293968 CPT1BQ92523 772 aa15.41■□□□□ 0.06
CCNF-201ENST00000293968 OXNAD1Q96HP4 312 aaPredicted RBP15.41■□□□□ 0.06
CCNF-201ENST00000293968 TUBB6Q9BUF5 446 aa15.41■□□□□ 0.06
CCNF-201ENST00000293968 TIPINQ9BVW5 301 aa15.41■□□□□ 0.06
CCNF-201ENST00000293968 TELO2Q9Y4R8 837 aa15.41■□□□□ 0.06
CCNF-201ENST00000293968 ZC3H11AO75152 810 aaKnown RBP eCLIP15.4■□□□□ 0.062e-9■□□□□ 8.9
CCNF-201ENST00000293968 C1QBPQ07021 282 aaKnown RBP15.4■□□□□ 0.06
CCNF-201ENST00000293968 PGM5Q15124 567 aa15.4■□□□□ 0.06
CCNF-201ENST00000293968 PCGF5Q86SE9 256 aa15.4■□□□□ 0.06
CCNF-201ENST00000293968 LRRN4Q8WUT4 740 aa15.4■□□□□ 0.06
CCNF-201ENST00000293968 NRG4Q8WWG1 115 aa15.4■□□□□ 0.06
CCNF-201ENST00000293968 ST6GALNAC4Q9H4F1 302 aa15.4■□□□□ 0.06
CCNF-201ENST00000293968 TRIM49D1C9J1S8 452 aa15.4■□□□□ 0.06
CCNF-201ENST00000293968 MCF2LO15068 1137 aa15.4■□□□□ 0.06
CCNF-201ENST00000293968 HNRNPCL1O60812 293 aaKnown RBP15.4■□□□□ 0.06
CCNF-201ENST00000293968 CHRNA5P30532 468 aa15.4■□□□□ 0.06
CCNF-201ENST00000293968 ZNF200P98182 395 aaPredicted RBP15.4■□□□□ 0.06
CCNF-201ENST00000293968 TFAMQ00059 246 aaKnown RBP15.4■□□□□ 0.06
CCNF-201ENST00000293968 MTMR2Q13614 643 aa15.4■□□□□ 0.06
CCNF-201ENST00000293968 BMPR2Q13873 1038 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms