RNA–Protein interactions for RNA: ENST00000288599.9

NCOA1-201, Transcript of nuclear receptor coactivator 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCOA1, Length 6,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOA1-201ENST00000288599 SMURF1Q9HCE7 757 aa4.56□□□□□ -1.68
NCOA1-201ENST00000288599 RRAGDQ9NQL2 400 aaPredicted RBP4.56□□□□□ -1.68
NCOA1-201ENST00000288599 SEC14L5O43304 696 aa4.55□□□□□ -1.68
NCOA1-201ENST00000288599 RHOBTB1O94844 696 aa4.55□□□□□ -1.68
NCOA1-201ENST00000288599 MFN2O95140 757 aa4.55□□□□□ -1.68
NCOA1-201ENST00000288599 DNTTP04053 509 aa4.55□□□□□ -1.68
NCOA1-201ENST00000288599 FCER1AP12319 257 aa4.55□□□□□ -1.68
NCOA1-201ENST00000288599 SLC26A3P40879 764 aa4.55□□□□□ -1.68
NCOA1-201ENST00000288599 MAPKAPK2P49137 400 aa4.55□□□□□ -1.68
NCOA1-201ENST00000288599 PRKAG1P54619 331 aa4.55□□□□□ -1.68
NCOA1-201ENST00000288599 TMBIM6P55061 237 aa4.55□□□□□ -1.68
NCOA1-201ENST00000288599 OCA2Q04671 838 aa4.55□□□□□ -1.68
NCOA1-201ENST00000288599 MTMR3Q13615 1198 aa4.55□□□□□ -1.68
NCOA1-201ENST00000288599 LPIN1Q14693 890 aa4.55□□□□□ -1.68
NCOA1-201ENST00000288599 GLB1LQ6UWU2 654 aa4.55□□□□□ -1.68
NCOA1-201ENST00000288599 NEK10Q6ZWH5 1172 aa4.55□□□□□ -1.68
NCOA1-201ENST00000288599 ADSSL1Q8N142 457 aa4.55□□□□□ -1.68
NCOA1-201ENST00000288599 TTLL6Q8N841 843 aa4.55□□□□□ -1.68
NCOA1-201ENST00000288599 MB21D1Q8N884 522 aa4.55□□□□□ -1.68
NCOA1-201ENST00000288599 PSMA8Q8TAA3 256 aa4.55□□□□□ -1.68
NCOA1-201ENST00000288599 TCEAL3Q969E4 200 aa4.55□□□□□ -1.68
NCOA1-201ENST00000288599 FAM162AQ96A26 154 aa4.55□□□□□ -1.68
NCOA1-201ENST00000288599 NPLQ9BXD5 320 aaPredicted RBP4.55□□□□□ -1.68
NCOA1-201ENST00000288599 EPB41L5Q9HCM4 733 aa4.55□□□□□ -1.68
NCOA1-201ENST00000288599 LATS2Q9NRM7 1088 aa4.55□□□□□ -1.68
NCOA1-201ENST00000288599 FAM118AQ9NWS6 357 aa4.55□□□□□ -1.68
NCOA1-201ENST00000288599 HERC5Q9UII4 1024 aaKnown RBP4.55□□□□□ -1.68
NCOA1-201ENST00000288599 SCAF8Q9UPN6 1271 aaKnown RBP4.55□□□□□ -1.68
NCOA1-201ENST00000288599 AIM2O14862 343 aa4.55□□□□□ -1.68
NCOA1-201ENST00000288599 CYP2E1P05181 493 aaPredicted RBP4.55□□□□□ -1.68
NCOA1-201ENST00000288599 GDI2P50395 445 aaKnown RBP4.55□□□□□ -1.68
NCOA1-201ENST00000288599 KLC1Q07866 573 aa4.55□□□□□ -1.68
NCOA1-201ENST00000288599 ADCY2Q08462 1091 aa4.55□□□□□ -1.68
NCOA1-201ENST00000288599 DMPKQ09013 629 aa4.55□□□□□ -1.68
NCOA1-201ENST00000288599 MTX1Q13505 466 aa4.55□□□□□ -1.68
NCOA1-201ENST00000288599 EIF2S3LQ2VIR3 472 aaKnown RBP4.55□□□□□ -1.68
NCOA1-201ENST00000288599 HEATR6Q6AI08 1181 aaKnown RBP4.55□□□□□ -1.68
NCOA1-201ENST00000288599 PYHIN1Q6K0P9 492 aa4.55□□□□□ -1.68
NCOA1-201ENST00000288599 TMTC3Q6ZXV5 915 aa4.55□□□□□ -1.68
NCOA1-201ENST00000288599 PEX26Q7Z412 305 aa4.55□□□□□ -1.68
NCOA1-201ENST00000288599 PXKQ7Z7A4 578 aa4.55□□□□□ -1.68
NCOA1-201ENST00000288599 ITIH5Q86UX2 942 aa4.55□□□□□ -1.68
NCOA1-201ENST00000288599 ZNF454Q8N9F8 522 aa4.55□□□□□ -1.68
NCOA1-201ENST00000288599 TDRD7Q8NHU6 1098 aaKnown RBP4.55□□□□□ -1.68
NCOA1-201ENST00000288599 SNRNP27Q8WVK2 155 aaKnown RBP4.55□□□□□ -1.68
NCOA1-201ENST00000288599 RFT1Q96AA3 541 aa4.55□□□□□ -1.68
NCOA1-201ENST00000288599 CAMKK2Q96RR4 588 aa4.55□□□□□ -1.68
NCOA1-201ENST00000288599 COQ7Q99807 217 aa4.55□□□□□ -1.68
NCOA1-201ENST00000288599 SLC29A3Q9BZD2 475 aa4.55□□□□□ -1.68
NCOA1-201ENST00000288599 SEMA6CQ9H3T2 930 aa4.55□□□□□ -1.68
NCOA1-201ENST00000288599 MTMR4Q9NYA4 1195 aa4.55□□□□□ -1.68
NCOA1-201ENST00000288599 PCDHA5Q9Y5H7 936 aa4.55□□□□□ -1.68
NCOA1-201ENST00000288599 ITIH6Q6UXX5 1313 aa4.55□□□□□ -1.68
NCOA1-201ENST00000288599 CRB1P82279 1406 aa4.55□□□□□ -1.68
NCOA1-201ENST00000288599 LINC00854A0A1B0GVQ3 168 aa4.55□□□□□ -1.68
NCOA1-201ENST00000288599 CCNT1O60563 726 aaKnown RBP4.55□□□□□ -1.68
NCOA1-201ENST00000288599 DNAJA2O60884 412 aa4.55□□□□□ -1.68
NCOA1-201ENST00000288599 SLC25A12O75746 678 aa4.55□□□□□ -1.68
NCOA1-201ENST00000288599 BPNT1O95861 308 aa4.55□□□□□ -1.68
NCOA1-201ENST00000288599 HLA-DQA2P01906 255 aa4.55□□□□□ -1.68
NCOA1-201ENST00000288599 KITP10721 976 aa4.55□□□□□ -1.68
NCOA1-201ENST00000288599 ITGA4P13612 1032 aa4.55□□□□□ -1.68
NCOA1-201ENST00000288599 SOX11P35716 441 aa4.55□□□□□ -1.68
NCOA1-201ENST00000288599 NUP107P57740 925 aa4.55□□□□□ -1.68
NCOA1-201ENST00000288599 C1QBPQ07021 282 aaKnown RBP4.55□□□□□ -1.68
NCOA1-201ENST00000288599 KLHL40Q2TBA0 621 aa4.55□□□□□ -1.68
NCOA1-201ENST00000288599 TLK2Q86UE8 772 aa4.55□□□□□ -1.68
NCOA1-201ENST00000288599 GLYCTKQ8IVS8 523 aa4.55□□□□□ -1.68
NCOA1-201ENST00000288599 GPR135Q8IZ08 494 aa4.55□□□□□ -1.68
NCOA1-201ENST00000288599 MSL3Q8N5Y2 521 aaKnown RBP4.55□□□□□ -1.68
NCOA1-201ENST00000288599 TRPV3Q8NET8 790 aa4.55□□□□□ -1.68
NCOA1-201ENST00000288599 CYFIP2Q96F07 1278 aa4.55□□□□□ -1.68
NCOA1-201ENST00000288599 STRBPQ96SI9 672 aaKnown RBP4.55□□□□□ -1.68
NCOA1-201ENST00000288599 USP31Q70CQ4 1352 aa4.55□□□□□ -1.68
NCOA1-201ENST00000288599 PIK3C2AO00443 1686 aa4.55□□□□□ -1.68
NCOA1-201ENST00000288599 MDFIC2A0A1B0GVS7 189 aa4.55□□□□□ -1.68
NCOA1-201ENST00000288599 HMX3A6NHT5 357 aa4.55□□□□□ -1.68
NCOA1-201ENST00000288599 PPM1BO75688 479 aa4.55□□□□□ -1.68
NCOA1-201ENST00000288599 MTA2O94776 668 aa4.55□□□□□ -1.68
NCOA1-201ENST00000288599 TGM2P21980 687 aa4.55□□□□□ -1.68
NCOA1-201ENST00000288599 GSTM2P28161 218 aa4.55□□□□□ -1.68
NCOA1-201ENST00000288599 GPC1P35052 558 aa4.55□□□□□ -1.68
NCOA1-201ENST00000288599 SLCO1A2P46721 670 aa4.55□□□□□ -1.68
NCOA1-201ENST00000288599 EPHB3P54753 998 aa4.55□□□□□ -1.68
NCOA1-201ENST00000288599 CDC16Q13042 620 aa4.55□□□□□ -1.68
NCOA1-201ENST00000288599 ART3Q13508 389 aa4.55□□□□□ -1.68
NCOA1-201ENST00000288599 CUL2Q13617 745 aa4.55□□□□□ -1.68
NCOA1-201ENST00000288599 KLHL35Q6PF15 583 aa4.55□□□□□ -1.68
NCOA1-201ENST00000288599 FIP1L1Q6UN15 594 aaKnown RBP4.55□□□□□ -1.68
NCOA1-201ENST00000288599 BTNL9Q6UXG8 535 aa4.55□□□□□ -1.68
NCOA1-201ENST00000288599 LRRC20Q8TCA0 184 aa4.55□□□□□ -1.68
NCOA1-201ENST00000288599 GTF3C2Q8WUA4 911 aaPredicted RBP4.55□□□□□ -1.68
NCOA1-201ENST00000288599 HEXIM2Q96MH2 286 aaKnown RBP4.55□□□□□ -1.68
NCOA1-201ENST00000288599 FAM129BQ96TA1 746 aa4.55□□□□□ -1.68
NCOA1-201ENST00000288599 UPF3AQ9H1J1 476 aaKnown RBP4.55□□□□□ -1.68
NCOA1-201ENST00000288599 TTYH1Q9H313 450 aaPredicted RBP4.55□□□□□ -1.68
NCOA1-201ENST00000288599 SPTLC3Q9NUV7 552 aa4.55□□□□□ -1.68
NCOA1-201ENST00000288599 C2orf72A6NCS6 295 aa4.55□□□□□ -1.68
NCOA1-201ENST00000288599 HNRNPDLO14979 420 aaKnown RBP4.55□□□□□ -1.68
NCOA1-201ENST00000288599 KATNA1O75449 491 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms