RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 FAM49AQ9H0Q0 323 aaPredicted RBP19.31■□□□□ 0.68
PDLIM3-201ENST00000284767 PDZD7Q9H5P4 517 aa19.31■□□□□ 0.68
PDLIM3-201ENST00000284767 LGALS13Q9UHV8 139 aa19.31■□□□□ 0.68
PDLIM3-201ENST00000284767 SLC15A5A6NIM6 579 aa19.3■□□□□ 0.68
PDLIM3-201ENST00000284767 MAGEB2O15479 319 aa19.3■□□□□ 0.68
PDLIM3-201ENST00000284767 CCNB1P14635 433 aa19.3■□□□□ 0.68
PDLIM3-201ENST00000284767 BRAFP15056 766 aa19.3■□□□□ 0.68
PDLIM3-201ENST00000284767 CYP2B6P20813 491 aa19.3■□□□□ 0.68
PDLIM3-201ENST00000284767 MSH2P43246 934 aa19.3■□□□□ 0.68
PDLIM3-201ENST00000284767 KIZQ2M2Z5 673 aa19.3■□□□□ 0.68
PDLIM3-201ENST00000284767 OLFML2BQ68BL8 750 aa19.3■□□□□ 0.68
PDLIM3-201ENST00000284767 KIAA0319LQ8IZA0 1049 aa19.3■□□□□ 0.68
PDLIM3-201ENST00000284767 FITM2Q8N6M3 262 aa19.3■□□□□ 0.68
PDLIM3-201ENST00000284767 GRK7Q8WTQ7 553 aa19.3■□□□□ 0.68
PDLIM3-201ENST00000284767 TGS1Q96RS0 853 aaKnown RBP19.3■□□□□ 0.68
PDLIM3-201ENST00000284767 PRMT7Q9NVM4 692 aaPredicted RBP19.3■□□□□ 0.68
PDLIM3-201ENST00000284767 POLIQ9UNA4 740 aa19.3■□□□□ 0.68
PDLIM3-201ENST00000284767 ANK1P16157 1881 aa19.3■□□□□ 0.68
PDLIM3-201ENST00000284767 THAP12O43422 761 aa19.3■□□□□ 0.68
PDLIM3-201ENST00000284767 STAG3L1P0CL83 205 aa19.3■□□□□ 0.68
PDLIM3-201ENST00000284767 CHKAP35790 457 aa19.3■□□□□ 0.68
PDLIM3-201ENST00000284767 LACTBP83111 547 aaPredicted RBP19.3■□□□□ 0.68
PDLIM3-201ENST00000284767 TRPC3Q13507 836 aa19.3■□□□□ 0.68
PDLIM3-201ENST00000284767 DGKDQ16760 1214 aa19.3■□□□□ 0.68
PDLIM3-201ENST00000284767 MCOLN2Q8IZK6 566 aa19.3■□□□□ 0.68
PDLIM3-201ENST00000284767 C11orf70Q9BRQ4 267 aa19.3■□□□□ 0.68
PDLIM3-201ENST00000284767 KLHL14Q9P2G3 628 aa19.3■□□□□ 0.68
PDLIM3-201ENST00000284767 NXF1Q9UBU9 619 aaKnown RBP19.3■□□□□ 0.68
PDLIM3-201ENST00000284767 ACTL7BQ9Y614 415 aa19.3■□□□□ 0.68
PDLIM3-201ENST00000284767 KAT6AQ92794 2004 aa19.29■□□□□ 0.68
PDLIM3-201ENST00000284767 LACTBL1A8MY62 500 aa19.29■□□□□ 0.68
PDLIM3-201ENST00000284767 WFS1O76024 890 aa19.29■□□□□ 0.68
PDLIM3-201ENST00000284767 STX2P32856 288 aa19.29■□□□□ 0.68
PDLIM3-201ENST00000284767 RAP1GAPP47736 663 aa19.29■□□□□ 0.68
PDLIM3-201ENST00000284767 MORN1Q5T089 497 aa19.29■□□□□ 0.68
PDLIM3-201ENST00000284767 XYLT2Q9H1B5 865 aa19.29■□□□□ 0.68
PDLIM3-201ENST00000284767 RPF1Q9H9Y2 349 aaKnown RBP19.29■□□□□ 0.68
PDLIM3-201ENST00000284767 CYP1A1P04798 512 aaPredicted RBP19.29■□□□□ 0.68
PDLIM3-201ENST00000284767 TBXAS1P24557 533 aaPredicted RBP19.29■□□□□ 0.68
PDLIM3-201ENST00000284767 IVDP26440 423 aa19.29■□□□□ 0.68
PDLIM3-201ENST00000284767 ATP11AP98196 1134 aa19.29■□□□□ 0.68
PDLIM3-201ENST00000284767 HIC1Q14526 733 aa19.29■□□□□ 0.68
PDLIM3-201ENST00000284767 MTFR1Q15390 333 aa19.29■□□□□ 0.68
PDLIM3-201ENST00000284767 IQSEC1Q6DN90 963 aa19.29■□□□□ 0.68
PDLIM3-201ENST00000284767 PPP1R21Q6ZMI0 780 aa19.29■□□□□ 0.68
PDLIM3-201ENST00000284767 C1orf54Q8WWF1 131 aa19.29■□□□□ 0.68
PDLIM3-201ENST00000284767 TRAIPQ9BWF2 469 aa19.29■□□□□ 0.68
PDLIM3-201ENST00000284767 NFKBIZQ9BYH8 718 aa19.29■□□□□ 0.68
PDLIM3-201ENST00000284767 CXCL16Q9H2A7 254 aa19.29■□□□□ 0.68
PDLIM3-201ENST00000284767 CDHR5Q9HBB8 845 aa19.29■□□□□ 0.68
PDLIM3-201ENST00000284767 NKIRAS1Q9NYS0 192 aa19.29■□□□□ 0.68
PDLIM3-201ENST00000284767 GAS8O95995 478 aa19.28■□□□□ 0.68
PDLIM3-201ENST00000284767 PAX7P23759 505 aa19.28■□□□□ 0.68
PDLIM3-201ENST00000284767 MAP2K5Q13163 448 aa19.28■□□□□ 0.68
PDLIM3-201ENST00000284767 ORC1Q13415 861 aa19.28■□□□□ 0.68
PDLIM3-201ENST00000284767 ZNF699Q32M78 642 aa19.28■□□□□ 0.68
PDLIM3-201ENST00000284767 JADE1Q6IE81 842 aa19.28■□□□□ 0.68
PDLIM3-201ENST00000284767 KIF2BQ8N4N8 673 aa19.28■□□□□ 0.68
PDLIM3-201ENST00000284767 GDAP1Q8TB36 358 aa19.28■□□□□ 0.68
PDLIM3-201ENST00000284767 FAM81BQ96LP2 452 aa19.28■□□□□ 0.68
PDLIM3-201ENST00000284767 CISHQ9NSE2 258 aa19.28■□□□□ 0.68
PDLIM3-201ENST00000284767 CTNNAL1Q9UBT7 734 aa19.28■□□□□ 0.68
PDLIM3-201ENST00000284767 SIX4Q9UIU6 781 aa19.28■□□□□ 0.68
PDLIM3-201ENST00000284767 ANAPC7Q9UJX3 599 aa19.28■□□□□ 0.68
PDLIM3-201ENST00000284767 BRD2P25440 801 aaKnown RBP19.28■□□□□ 0.68
PDLIM3-201ENST00000284767 NSFP46459 744 aaKnown RBP19.28■□□□□ 0.68
PDLIM3-201ENST00000284767 CCNG1P51959 295 aa19.28■□□□□ 0.68
PDLIM3-201ENST00000284767 ITGA8P53708 1063 aa19.28■□□□□ 0.68
PDLIM3-201ENST00000284767 GRM1Q13255 1194 aa19.28■□□□□ 0.68
PDLIM3-201ENST00000284767 MPP2Q14168 576 aa19.28■□□□□ 0.68
PDLIM3-201ENST00000284767 BZW1Q7L1Q6 419 aaKnown RBP19.28■□□□□ 0.68
PDLIM3-201ENST00000284767 UBR7Q8N806 425 aa19.28■□□□□ 0.68
PDLIM3-201ENST00000284767 PRCCQ92733 491 aaPredicted RBP19.28■□□□□ 0.68
PDLIM3-201ENST00000284767 RAB3IPQ96QF0 476 aaPredicted RBP19.28■□□□□ 0.68
PDLIM3-201ENST00000284767 MROH7Q68CQ1 1323 aa19.27■□□□□ 0.68
PDLIM3-201ENST00000284767 B4GALT4O60513 344 aa19.27■□□□□ 0.68
PDLIM3-201ENST00000284767 TSPAN1O60635 241 aa19.27■□□□□ 0.68
PDLIM3-201ENST00000284767 DIAPH2O60879 1101 aa19.27■□□□□ 0.68
PDLIM3-201ENST00000284767 CDH16O75309 829 aa19.27■□□□□ 0.68
PDLIM3-201ENST00000284767 CDH8P55286 799 aa19.27■□□□□ 0.68
PDLIM3-201ENST00000284767 BPIFB4P59827 614 aa19.27■□□□□ 0.68
PDLIM3-201ENST00000284767 BEX3Q00994 111 aa19.27■□□□□ 0.68
PDLIM3-201ENST00000284767 KYNUQ16719 465 aa19.27■□□□□ 0.68
PDLIM3-201ENST00000284767 C1orf127Q8N9H9 656 aa19.27■□□□□ 0.68
PDLIM3-201ENST00000284767 ZNF606Q8WXB4 792 aa19.27■□□□□ 0.68
PDLIM3-201ENST00000284767 RMDN2Q96LZ7 410 aa19.27■□□□□ 0.68
PDLIM3-201ENST00000284767 ANKRD27Q96NW4 1050 aa19.27■□□□□ 0.68
PDLIM3-201ENST00000284767 NIF3L1Q9GZT8 377 aa19.27■□□□□ 0.68
PDLIM3-201ENST00000284767 MLXIPLQ9NP71 852 aa19.27■□□□□ 0.68
PDLIM3-201ENST00000284767 RNF19AQ9NV58 838 aa19.27■□□□□ 0.68
PDLIM3-201ENST00000284767 NINJ2Q9NZG7 142 aa19.27■□□□□ 0.68
PDLIM3-201ENST00000284767 GNEQ9Y223 722 aaKnown RBP19.27■□□□□ 0.68
PDLIM3-201ENST00000284767 HOXD8P13378 290 aaPredicted RBP19.27■□□□□ 0.67
PDLIM3-201ENST00000284767 ATF2P15336 505 aa19.27■□□□□ 0.67
PDLIM3-201ENST00000284767 ASPAP45381 313 aa19.27■□□□□ 0.67
PDLIM3-201ENST00000284767 AP3M2P53677 418 aa19.27■□□□□ 0.67
PDLIM3-201ENST00000284767 NOMO3P69849 1222 aa19.27■□□□□ 0.67
PDLIM3-201ENST00000284767 CENPCQ03188 943 aa19.27■□□□□ 0.67
PDLIM3-201ENST00000284767 SGSM1Q2NKQ1 1148 aa19.27■□□□□ 0.67
PDLIM3-201ENST00000284767 CGB2Q6NT52 195 aa19.27■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms