RNA–Protein interactions for RNA: ENST00000284273.5

UBASH3B-201, Transcript of ubiquitin associated and SH3 domain containing B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBASH3B, Length 6,912 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBASH3B-201ENST00000284273 C9orf72Q96LT7 481 aa12.35□□□□□ -0.43
UBASH3B-201ENST00000284273 SOHLH2Q9NX45 425 aa12.35□□□□□ -0.43
UBASH3B-201ENST00000284273 TRPM5Q9NZQ8 1165 aa12.35□□□□□ -0.43
UBASH3B-201ENST00000284273 MYPNQ86TC9 1320 aa12.35□□□□□ -0.43
UBASH3B-201ENST00000284273 IL18RAPO95256 599 aa12.35□□□□□ -0.43
UBASH3B-201ENST00000284273 KRT4P19013 534 aa12.35□□□□□ -0.43
UBASH3B-201ENST00000284273 CDCA5Q96FF9 252 aa12.35□□□□□ -0.43
UBASH3B-201ENST00000284273 TMEM60Q9H2L4 133 aa12.35□□□□□ -0.43
UBASH3B-201ENST00000284273 TLR8Q9NR97 1041 aaKnown RBP12.35□□□□□ -0.43
UBASH3B-201ENST00000284273 TRMT6Q9UJA5 497 aaKnown RBP12.35□□□□□ -0.43
UBASH3B-201ENST00000284273 ZCCHC11Q5TAX3 1644 aaKnown RBP12.35□□□□□ -0.43
UBASH3B-201ENST00000284273 CDC42EP1Q00587 391 aa12.34□□□□□ -0.43
UBASH3B-201ENST00000284273 PDIA6Q15084 440 aa12.34□□□□□ -0.43
UBASH3B-201ENST00000284273 CCDC81Q6ZN84 652 aa12.34□□□□□ -0.43
UBASH3B-201ENST00000284273 HMX1Q9NP08 348 aaPredicted RBP12.34□□□□□ -0.43
UBASH3B-201ENST00000284273 EXOSC4Q9NPD3 245 aaKnown RBP12.34□□□□□ -0.43
UBASH3B-201ENST00000284273 THG1LQ9NWX6 298 aaKnown RBP12.34□□□□□ -0.43
UBASH3B-201ENST00000284273 EIF2S1P05198 315 aaKnown RBP12.34□□□□□ -0.43
UBASH3B-201ENST00000284273 GYS1P13807 737 aa12.34□□□□□ -0.43
UBASH3B-201ENST00000284273 CTNNB1P35222 781 aa12.34□□□□□ -0.43
UBASH3B-201ENST00000284273 OXCT1P55809 520 aa12.34□□□□□ -0.43
UBASH3B-201ENST00000284273 APBA1Q02410 837 aa12.34□□□□□ -0.43
UBASH3B-201ENST00000284273 NFIAQ12857 509 aa12.34□□□□□ -0.43
UBASH3B-201ENST00000284273 TKFCQ3LXA3 575 aa12.34□□□□□ -0.43
UBASH3B-201ENST00000284273 RIN2Q8WYP3 895 aaPredicted RBP12.34□□□□□ -0.43
UBASH3B-201ENST00000284273 RELTQ969Z4 430 aa12.34□□□□□ -0.43
UBASH3B-201ENST00000284273 RNPC3Q96LT9 517 aaKnown RBP12.34□□□□□ -0.43
UBASH3B-201ENST00000284273 PLEKHG2Q9H7P9 1386 aa12.34□□□□□ -0.43
UBASH3B-201ENST00000284273 MYMKA6NI61 221 aa12.34□□□□□ -0.43
UBASH3B-201ENST00000284273 STRNO43815 780 aa12.34□□□□□ -0.43
UBASH3B-201ENST00000284273 VCLP18206 1134 aa12.34□□□□□ -0.43
UBASH3B-201ENST00000284273 KRT20P35900 424 aa12.34□□□□□ -0.43
UBASH3B-201ENST00000284273 FMO5P49326 533 aa12.34□□□□□ -0.43
UBASH3B-201ENST00000284273 NDUFV1P49821 464 aa12.34□□□□□ -0.43
UBASH3B-201ENST00000284273 GRIN3AQ8TCU5 1115 aa12.34□□□□□ -0.43
UBASH3B-201ENST00000284273 EIF2AQ9BY44 585 aaKnown RBP12.34□□□□□ -0.43
UBASH3B-201ENST00000284273 CAPN1P07384 714 aa12.34□□□□□ -0.43
UBASH3B-201ENST00000284273 HIC1Q14526 733 aa12.34□□□□□ -0.43
UBASH3B-201ENST00000284273 PCSK9Q8NBP7 692 aaKnown RBP12.34□□□□□ -0.43
UBASH3B-201ENST00000284273 MTFR1LQ9H019 292 aa12.34□□□□□ -0.43
UBASH3B-201ENST00000284273 TBC1D3BA6NDS4 549 aa12.34□□□□□ -0.43
UBASH3B-201ENST00000284273 CLK2P49760 499 aaKnown RBP12.34□□□□□ -0.43
UBASH3B-201ENST00000284273 AP3M2P53677 418 aa12.34□□□□□ -0.43
UBASH3B-201ENST00000284273 EIF3BP55884 814 aaKnown RBP12.34□□□□□ -0.43
UBASH3B-201ENST00000284273 ZNF284Q2VY69 593 aa12.34□□□□□ -0.43
UBASH3B-201ENST00000284273 TRIM72Q6ZMU5 477 aa12.34□□□□□ -0.43
UBASH3B-201ENST00000284273 MOB2Q70IA6 237 aa12.34□□□□□ -0.43
UBASH3B-201ENST00000284273 RCOR2Q8IZ40 523 aa12.34□□□□□ -0.43
UBASH3B-201ENST00000284273 EXD1Q8NHP7 514 aa12.34□□□□□ -0.43
UBASH3B-201ENST00000284273 ZNF669Q96BR6 464 aaPredicted RBP12.34□□□□□ -0.43
UBASH3B-201ENST00000284273 UTP6Q9NYH9 597 aaKnown RBP12.34□□□□□ -0.43
UBASH3B-201ENST00000284273 TRPC4Q9UBN4 977 aa12.34□□□□□ -0.43
UBASH3B-201ENST00000284273 KDM6AO15550 1401 aaPredicted RBP12.34□□□□□ -0.43
UBASH3B-201ENST00000284273 EXTL3O43909 919 aa12.34□□□□□ -0.43
UBASH3B-201ENST00000284273 CAND2O75155 1236 aa12.34□□□□□ -0.43
UBASH3B-201ENST00000284273 LUC7L3O95232 432 aaKnown RBP12.34□□□□□ -0.43
UBASH3B-201ENST00000284273 PRIM2P49643 509 aa12.34□□□□□ -0.43
UBASH3B-201ENST00000284273 SFSWAPQ12872 951 aaKnown RBP12.34□□□□□ -0.43
UBASH3B-201ENST00000284273 SHC4Q6S5L8 630 aa12.34□□□□□ -0.43
UBASH3B-201ENST00000284273 TFB1MQ8WVM0 346 aaKnown RBP12.34□□□□□ -0.43
UBASH3B-201ENST00000284273 CDHR2Q9BYE9 1310 aa12.33□□□□□ -0.43
UBASH3B-201ENST00000284273 GNG14A0A1W2PPG7 69 aa12.33□□□□□ -0.43
UBASH3B-201ENST00000284273 C2orf81A6NN90 581 aa12.33□□□□□ -0.43
UBASH3B-201ENST00000284273 H0YC42 278 aa12.33□□□□□ -0.43
UBASH3B-201ENST00000284273 ARP10275 920 aa12.33□□□□□ -0.43
UBASH3B-201ENST00000284273 ADORA2AP29274 412 aa12.33□□□□□ -0.43
UBASH3B-201ENST00000284273 PLA2G4AP47712 749 aa12.33□□□□□ -0.43
UBASH3B-201ENST00000284273 KCNJ1P48048 391 aa12.33□□□□□ -0.43
UBASH3B-201ENST00000284273 C16orf86Q6ZW13 317 aa12.33□□□□□ -0.43
UBASH3B-201ENST00000284273 SETD3Q86TU7 594 aaPredicted RBP12.33□□□□□ -0.43
UBASH3B-201ENST00000284273 SYTL1Q8IYJ3 562 aa12.33□□□□□ -0.43
UBASH3B-201ENST00000284273 BCL2L14Q9BZR8 327 aa12.33□□□□□ -0.43
UBASH3B-201ENST00000284273 NEUROD4Q9HD90 331 aa12.33□□□□□ -0.43
UBASH3B-201ENST00000284273 PKD2L2Q9NZM6 624 aa12.33□□□□□ -0.43
UBASH3B-201ENST00000284273 RASA1P20936 1047 aa12.33□□□□□ -0.44
UBASH3B-201ENST00000284273 OCA2Q04671 838 aa12.33□□□□□ -0.44
UBASH3B-201ENST00000284273 PTAR1Q7Z6K3 402 aaPredicted RBP12.33□□□□□ -0.44
UBASH3B-201ENST00000284273 DNAAF5Q86Y56 855 aa12.33□□□□□ -0.44
UBASH3B-201ENST00000284273 OMDQ99983 421 aa12.33□□□□□ -0.44
UBASH3B-201ENST00000284273 PRMT7Q9NVM4 692 aaPredicted RBP12.33□□□□□ -0.44
UBASH3B-201ENST00000284273 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.33□□□□□ -0.44
UBASH3B-201ENST00000284273 SPATA31A6Q5VVP1 1343 aa12.33□□□□□ -0.44
UBASH3B-201ENST00000284273 TMEM150BA6NC51 233 aa12.33□□□□□ -0.44
UBASH3B-201ENST00000284273 DYRK3O43781 588 aa12.33□□□□□ -0.44
UBASH3B-201ENST00000284273 PGK1P00558 417 aa12.33□□□□□ -0.44
UBASH3B-201ENST00000284273 IL10P22301 178 aa12.33□□□□□ -0.44
UBASH3B-201ENST00000284273 RFC5P40937 340 aa12.33□□□□□ -0.44
UBASH3B-201ENST00000284273 ATG9AQ7Z3C6 839 aa12.33□□□□□ -0.44
UBASH3B-201ENST00000284273 ARHGEF26Q96DR7 871 aa12.33□□□□□ -0.44
UBASH3B-201ENST00000284273 EMILIN2Q9BXX0 1053 aa12.33□□□□□ -0.44
UBASH3B-201ENST00000284273 HECW2Q9P2P5 1572 aa12.33□□□□□ -0.44
UBASH3B-201ENST00000284273 FDX1P10109 184 aa12.33□□□□□ -0.44
UBASH3B-201ENST00000284273 CCR4P51679 360 aa12.33□□□□□ -0.44
UBASH3B-201ENST00000284273 CLCN6P51797 869 aa12.33□□□□□ -0.44
UBASH3B-201ENST00000284273 GRAMD4Q6IC98 578 aa12.33□□□□□ -0.44
UBASH3B-201ENST00000284273 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.33□□□□□ -0.44
UBASH3B-201ENST00000284273 RUVBL2Q9Y230 463 aaKnown RBP12.33□□□□□ -0.44
UBASH3B-201ENST00000284273 MIF4GDA9UHW6 222 aaKnown RBP12.33□□□□□ -0.44
UBASH3B-201ENST00000284273 TCP11X1B4DZS4 312 aa12.33□□□□□ -0.44
UBASH3B-201ENST00000284273 CST8O60676 142 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms