RNA–Protein interactions for RNA: ENST00000283254.11

SCN3A-201, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN3A, Length 9,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-201ENST00000283254 TMEM8AQ9HCN3 771 aa4.23□□□□□ -1.73
SCN3A-201ENST00000283254 SPASTQ9UBP0 616 aa4.23□□□□□ -1.73
SCN3A-201ENST00000283254 TUBE1Q9UJT0 475 aa4.23□□□□□ -1.73
SCN3A-201ENST00000283254 ZNF229Q9UJW7 825 aa4.23□□□□□ -1.73
SCN3A-201ENST00000283254 GTF3C4Q9UKN8 822 aa4.23□□□□□ -1.73
SCN3A-201ENST00000283254 ARL2BPQ9Y2Y0 163 aa4.23□□□□□ -1.73
SCN3A-201ENST00000283254 AAR2Q9Y312 384 aaKnown RBP4.23□□□□□ -1.73
SCN3A-201ENST00000283254 LSM8O95777 96 aaKnown RBP4.23□□□□□ -1.73
SCN3A-201ENST00000283254 ECDO95905 644 aaPredicted RBP4.23□□□□□ -1.73
SCN3A-201ENST00000283254 KRT6AP02538 564 aa4.23□□□□□ -1.73
SCN3A-201ENST00000283254 TFRCP02786 760 aaKnown RBP4.23□□□□□ -1.73
SCN3A-201ENST00000283254 KRT6BP04259 564 aa4.23□□□□□ -1.73
SCN3A-201ENST00000283254 ZNF24P17028 368 aa4.23□□□□□ -1.73
SCN3A-201ENST00000283254 KRT6CP48668 564 aa4.23□□□□□ -1.73
SCN3A-201ENST00000283254 NCAPHQ15003 741 aa4.23□□□□□ -1.73
SCN3A-201ENST00000283254 ICE2Q659A1 982 aa4.23□□□□□ -1.73
SCN3A-201ENST00000283254 NEK5Q6P3R8 708 aa4.23□□□□□ -1.73
SCN3A-201ENST00000283254 RGS9BPQ6ZS82 235 aa4.23□□□□□ -1.73
SCN3A-201ENST00000283254 ADCK1Q86TW2 530 aa4.23□□□□□ -1.73
SCN3A-201ENST00000283254 MICU2Q8IYU8 434 aa4.23□□□□□ -1.73
SCN3A-201ENST00000283254 CYP4Z2PQ8N1L4 340 aa4.23□□□□□ -1.73
SCN3A-201ENST00000283254 SPATA18Q8TC71 538 aa4.23□□□□□ -1.73
SCN3A-201ENST00000283254 MFSD1Q9H3U5 465 aa4.23□□□□□ -1.73
SCN3A-201ENST00000283254 VCPKMTQ9H867 229 aa4.23□□□□□ -1.73
SCN3A-201ENST00000283254 MTMR4Q9NYA4 1195 aa4.23□□□□□ -1.73
SCN3A-201ENST00000283254 TLR7Q9NYK1 1049 aaKnown RBP4.23□□□□□ -1.73
SCN3A-201ENST00000283254 UXTQ9UBK9 157 aaPredicted RBP4.23□□□□□ -1.73
SCN3A-201ENST00000283254 UBA2Q9UBT2 640 aaPredicted RBP4.23□□□□□ -1.73
SCN3A-201ENST00000283254 ADAM30Q9UKF2 790 aa4.23□□□□□ -1.73
SCN3A-201ENST00000283254 AP4S1Q9Y587 144 aa4.23□□□□□ -1.73
SCN3A-201ENST00000283254 TMEM114B3SHH9 223 aa4.22□□□□□ -1.73
SCN3A-201ENST00000283254 H0Y3Z8 333 aa4.22□□□□□ -1.73
SCN3A-201ENST00000283254 SNRPAP09012 282 aaKnown RBP4.22□□□□□ -1.73
SCN3A-201ENST00000283254 HSPA9P38646 679 aaKnown RBP4.22□□□□□ -1.73
SCN3A-201ENST00000283254 RESTQ13127 1097 aa4.22□□□□□ -1.73
SCN3A-201ENST00000283254 STX3Q13277 289 aa4.22□□□□□ -1.73
SCN3A-201ENST00000283254 SGCGQ13326 291 aa4.22□□□□□ -1.73
SCN3A-201ENST00000283254 MGAT5BQ3V5L5 792 aa4.22□□□□□ -1.73
SCN3A-201ENST00000283254 COBLL1Q53SF7 1204 aa4.22□□□□□ -1.73
SCN3A-201ENST00000283254 TCEAL5Q5H9L2 206 aa4.22□□□□□ -1.73
SCN3A-201ENST00000283254 AGAP9Q5VTM2 703 aa4.22□□□□□ -1.73
SCN3A-201ENST00000283254 FGD2Q7Z6J4 655 aa4.22□□□□□ -1.73
SCN3A-201ENST00000283254 RPAINQ86UA6 219 aa4.22□□□□□ -1.73
SCN3A-201ENST00000283254 TERB1Q8NA31 727 aa4.22□□□□□ -1.73
SCN3A-201ENST00000283254 MYLK2Q9H1R3 596 aa4.22□□□□□ -1.73
SCN3A-201ENST00000283254 ELOVL6Q9H5J4 265 aa4.22□□□□□ -1.73
SCN3A-201ENST00000283254 ANTXR1Q9H6X2 564 aa4.22□□□□□ -1.73
SCN3A-201ENST00000283254 RGS18Q9NS28 235 aa4.22□□□□□ -1.73
SCN3A-201ENST00000283254 ABI2Q9NYB9 513 aaPredicted RBP4.22□□□□□ -1.73
SCN3A-201ENST00000283254 SEPT3Q9UH03 358 aa4.22□□□□□ -1.73
SCN3A-201ENST00000283254 MAPRE3Q9UPY8 281 aa4.22□□□□□ -1.73
SCN3A-201ENST00000283254 TET3O43151 1660 aa4.22□□□□□ -1.73
SCN3A-201ENST00000283254 NEDD4P46934 1319 aa4.22□□□□□ -1.73
SCN3A-201ENST00000283254 A0A087WZ62 844 aa4.22□□□□□ -1.73
SCN3A-201ENST00000283254 CYP27B1O15528 508 aa4.22□□□□□ -1.73
SCN3A-201ENST00000283254 MYBL2P10244 700 aa4.22□□□□□ -1.73
SCN3A-201ENST00000283254 HIRAP54198 1017 aaPredicted RBP4.22□□□□□ -1.73
SCN3A-201ENST00000283254 BCAT1P54687 386 aa4.22□□□□□ -1.73
SCN3A-201ENST00000283254 POLE2P56282 527 aa4.22□□□□□ -1.73
SCN3A-201ENST00000283254 YWHAZP63104 245 aaKnown RBP4.22□□□□□ -1.73
SCN3A-201ENST00000283254 PPARDQ03181 441 aa4.22□□□□□ -1.73
SCN3A-201ENST00000283254 LRRC6Q86X45 466 aa4.22□□□□□ -1.73
SCN3A-201ENST00000283254 NUP93Q8N1F7 819 aa4.22□□□□□ -1.73
SCN3A-201ENST00000283254 FBXO32Q969P5 355 aa4.22□□□□□ -1.73
SCN3A-201ENST00000283254 HPDLQ96IR7 371 aa4.22□□□□□ -1.73
SCN3A-201ENST00000283254 RPRD1AQ96P16 312 aaPredicted RBP4.22□□□□□ -1.73
SCN3A-201ENST00000283254 AGPAT1Q99943 283 aa4.22□□□□□ -1.73
SCN3A-201ENST00000283254 DCTN4Q9UJW0 460 aa4.22□□□□□ -1.73
SCN3A-201ENST00000283254 MBL2P11226 248 aaPredicted RBP4.22□□□□□ -1.73
SCN3A-201ENST00000283254 GPD1P21695 349 aa4.22□□□□□ -1.73
SCN3A-201ENST00000283254 GPC1P35052 558 aa4.22□□□□□ -1.73
SCN3A-201ENST00000283254 SOAT1P35610 550 aa4.22□□□□□ -1.73
SCN3A-201ENST00000283254 MAGOHP61326 146 aaKnown RBP4.22□□□□□ -1.73
SCN3A-201ENST00000283254 MAD2L1Q13257 205 aaPredicted RBP4.22□□□□□ -1.73
SCN3A-201ENST00000283254 C1DQ13901 141 aaKnown RBP4.22□□□□□ -1.73
SCN3A-201ENST00000283254 NFIXQ14938 502 aa4.22□□□□□ -1.73
SCN3A-201ENST00000283254 LMBRD2Q68DH5 695 aaPredicted RBP4.22□□□□□ -1.73
SCN3A-201ENST00000283254 MOXD1Q6UVY6 613 aa4.22□□□□□ -1.73
SCN3A-201ENST00000283254 METTL3Q86U44 580 aaKnown RBP4.22□□□□□ -1.73
SCN3A-201ENST00000283254 UNC45BQ8IWX7 931 aa4.22□□□□□ -1.73
SCN3A-201ENST00000283254 TMEM159Q96B96 161 aa4.22□□□□□ -1.73
SCN3A-201ENST00000283254 VMP1Q96GC9 406 aa4.22□□□□□ -1.73
SCN3A-201ENST00000283254 PARD6BQ9BYG5 372 aa4.22□□□□□ -1.73
SCN3A-201ENST00000283254 GOLPH3Q9H4A6 298 aa4.22□□□□□ -1.73
SCN3A-201ENST00000283254 FBXO44Q9H4M3 255 aa4.22□□□□□ -1.73
SCN3A-201ENST00000283254 TASP1Q9H6P5 420 aa4.22□□□□□ -1.73
SCN3A-201ENST00000283254 GBA2Q9HCG7 927 aaPredicted RBP4.22□□□□□ -1.73
SCN3A-201ENST00000283254 EXOSC4Q9NPD3 245 aaKnown RBP4.22□□□□□ -1.73
SCN3A-201ENST00000283254 FBXL21Q9UKT6 434 aa4.22□□□□□ -1.73
SCN3A-201ENST00000283254 STARD13Q9Y3M8 1113 aa4.22□□□□□ -1.73
SCN3A-201ENST00000283254 CEP250Q9BV73 2442 aa4.22□□□□□ -1.73
SCN3A-201ENST00000283254 CNTNAP4Q9C0A0 1308 aa4.22□□□□□ -1.73
SCN3A-201ENST00000283254 GNG14A0A1W2PPG7 69 aa4.22□□□□□ -1.73
SCN3A-201ENST00000283254 STX11O75558 287 aa4.22□□□□□ -1.73
SCN3A-201ENST00000283254 CABYRO75952 493 aa4.22□□□□□ -1.73
SCN3A-201ENST00000283254 TKTP29401 623 aaKnown RBP4.22□□□□□ -1.73
SCN3A-201ENST00000283254 GTF2H1P32780 548 aa4.22□□□□□ -1.73
SCN3A-201ENST00000283254 THPOP40225 353 aa4.22□□□□□ -1.73
SCN3A-201ENST00000283254 PEX5P50542 639 aa4.22□□□□□ -1.73
SCN3A-201ENST00000283254 ITGA1P56199 1179 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms