RNA–Protein interactions for RNA: ENST00000282268.7

XRCC4-201, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRCC4, Length 1,696 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-201ENST00000282268 ARHGEF37A1IGU5 675 aa12.04□□□□□ -0.48
XRCC4-201ENST00000282268 GRID2IPA4D2P6 1211 aa12.04□□□□□ -0.48
XRCC4-201ENST00000282268 BTNL10A8MVZ5 291 aa12.04□□□□□ -0.48
XRCC4-201ENST00000282268 URI1O94763 535 aaPredicted RBP12.04□□□□□ -0.48
XRCC4-201ENST00000282268 ERBB2P04626 1255 aa12.04□□□□□ -0.48
XRCC4-201ENST00000282268 CYP1A2P05177 515 aa12.04□□□□□ -0.48
XRCC4-201ENST00000282268 PCSK1P29120 753 aa12.04□□□□□ -0.48
XRCC4-201ENST00000282268 GPD2P43304 727 aa12.04□□□□□ -0.48
XRCC4-201ENST00000282268 PDE4CQ08493 712 aa12.04□□□□□ -0.48
XRCC4-201ENST00000282268 MESDQ14696 234 aa12.04□□□□□ -0.48
XRCC4-201ENST00000282268 PTPN20Q4JDL3 420 aa12.04□□□□□ -0.48
XRCC4-201ENST00000282268 ARHGAP17Q68EM7 881 aa12.04□□□□□ -0.48
XRCC4-201ENST00000282268 FUT10Q6P4F1 479 aa12.04□□□□□ -0.48
XRCC4-201ENST00000282268 DAAM2Q86T65 1068 aa12.04□□□□□ -0.48
XRCC4-201ENST00000282268 PHF13Q86YI8 300 aaPredicted RBP12.04□□□□□ -0.48
XRCC4-201ENST00000282268 RNF10Q8N5U6 811 aaKnown RBP12.04□□□□□ -0.48
XRCC4-201ENST00000282268 OR10T2Q8NGX3 314 aa12.04□□□□□ -0.48
XRCC4-201ENST00000282268 TPCN2Q8NHX9 752 aa12.04□□□□□ -0.48
XRCC4-201ENST00000282268 ZNF564Q8TBZ8 553 aaPredicted RBP12.04□□□□□ -0.48
XRCC4-201ENST00000282268 TRIM11Q96F44 468 aa12.04□□□□□ -0.48
XRCC4-201ENST00000282268 CPXM1Q96SM3 734 aa12.04□□□□□ -0.48
XRCC4-201ENST00000282268 B3GNT5Q9BYG0 378 aa12.04□□□□□ -0.48
XRCC4-201ENST00000282268 LHX5Q9H2C1 402 aa12.04□□□□□ -0.48
XRCC4-201ENST00000282268 CDH9Q9ULB4 789 aa12.04□□□□□ -0.48
XRCC4-201ENST00000282268 MRPL42Q9Y6G3 142 aaKnown RBP12.04□□□□□ -0.48
XRCC4-201ENST00000282268 ALPK3Q96L96 1907 aa12.04□□□□□ -0.48
XRCC4-201ENST00000282268 CTAGE9A4FU28 777 aa12.03□□□□□ -0.48
XRCC4-201ENST00000282268 TMEM189-UBE2V1I3L0A0 370 aa12.03□□□□□ -0.48
XRCC4-201ENST00000282268 SF3B1O75533 1304 aaKnown RBP eCLIP12.03□□□□□ -0.484e-6■■■■■ 139.6
XRCC4-201ENST00000282268 CYP11A1P05108 521 aa12.03□□□□□ -0.48
XRCC4-201ENST00000282268 CALB1P05937 261 aa12.03□□□□□ -0.48
XRCC4-201ENST00000282268 FAM163BP0C2L3 166 aa12.03□□□□□ -0.48
XRCC4-201ENST00000282268 TYMPP19971 482 aa12.03□□□□□ -0.48
XRCC4-201ENST00000282268 MMP8P22894 467 aa12.03□□□□□ -0.48
XRCC4-201ENST00000282268 PAX3P23760 479 aa12.03□□□□□ -0.48
XRCC4-201ENST00000282268 TTC3P53804 2025 aa12.03□□□□□ -0.48
XRCC4-201ENST00000282268 TSPY1Q01534 308 aa12.03□□□□□ -0.48
XRCC4-201ENST00000282268 C1QBPQ07021 282 aaKnown RBP12.03□□□□□ -0.48
XRCC4-201ENST00000282268 PTP4A2Q12974 167 aa12.03□□□□□ -0.48
XRCC4-201ENST00000282268 PDCLQ13371 301 aa12.03□□□□□ -0.48
XRCC4-201ENST00000282268 STILQ15468 1287 aa12.03□□□□□ -0.48
XRCC4-201ENST00000282268 IFI16Q16666 785 aaKnown RBP12.03□□□□□ -0.48
XRCC4-201ENST00000282268 CTXN3Q4LDR2 81 aa12.03□□□□□ -0.48
XRCC4-201ENST00000282268 VARS2Q5ST30 1063 aaKnown RBP12.03□□□□□ -0.48
XRCC4-201ENST00000282268 RHOT2Q8IXI1 618 aa12.03□□□□□ -0.48
XRCC4-201ENST00000282268 MYLPFQ96A32 169 aa12.03□□□□□ -0.48
XRCC4-201ENST00000282268 ZNF689Q96CS4 500 aaPredicted RBP12.03□□□□□ -0.48
XRCC4-201ENST00000282268 PSMB7Q99436 277 aa12.03□□□□□ -0.48
XRCC4-201ENST00000282268 NAPGQ99747 312 aaPredicted RBP12.03□□□□□ -0.48
XRCC4-201ENST00000282268 ZNF518BQ9C0D4 1074 aa12.03□□□□□ -0.48
XRCC4-201ENST00000282268 TMLHEQ9NVH6 421 aa12.03□□□□□ -0.48
XRCC4-201ENST00000282268 PACSIN2Q9UNF0 486 aaPredicted RBP12.03□□□□□ -0.48
XRCC4-201ENST00000282268 A0A0A6YYK5 440 aaPredicted RBP12.03□□□□□ -0.48
XRCC4-201ENST00000282268 C2CD2LO14523 706 aa12.03□□□□□ -0.48
XRCC4-201ENST00000282268 BUB1BO60566 1050 aaPredicted RBP12.03□□□□□ -0.48
XRCC4-201ENST00000282268 AP1G2O75843 785 aa12.03□□□□□ -0.48
XRCC4-201ENST00000282268 CSPG5O95196 566 aa12.03□□□□□ -0.48
XRCC4-201ENST00000282268 ATP1A1P05023 1023 aaKnown RBP12.03□□□□□ -0.48
XRCC4-201ENST00000282268 MYBL1P10243 752 aa12.03□□□□□ -0.48
XRCC4-201ENST00000282268 LCP1P13796 627 aa12.03□□□□□ -0.48
XRCC4-201ENST00000282268 CDH5P33151 784 aaPredicted RBP12.03□□□□□ -0.48
XRCC4-201ENST00000282268 MAP3K7CLP57077 242 aa12.03□□□□□ -0.48
XRCC4-201ENST00000282268 SLC39A12Q504Y0 691 aa12.03□□□□□ -0.48
XRCC4-201ENST00000282268 INTS6LQ5JSJ4 861 aaKnown RBP12.03□□□□□ -0.48
XRCC4-201ENST00000282268 OR6B2Q6IFH4 312 aa12.03□□□□□ -0.48
XRCC4-201ENST00000282268 PMF1Q6P1K2 205 aa12.03□□□□□ -0.48
XRCC4-201ENST00000282268 DNAJC24Q6P3W2 148 aa12.03□□□□□ -0.48
XRCC4-201ENST00000282268 PSRC1Q6PGN9 363 aaPredicted RBP12.03□□□□□ -0.48
XRCC4-201ENST00000282268 KCNT2Q6UVM3 1135 aa12.03□□□□□ -0.48
XRCC4-201ENST00000282268 LRRTM3Q86VH5 581 aa12.03□□□□□ -0.48
XRCC4-201ENST00000282268 FUKQ8N0W3 1084 aa12.03□□□□□ -0.48
XRCC4-201ENST00000282268 ANKRD52Q8NB46 1076 aa12.03□□□□□ -0.48
XRCC4-201ENST00000282268 MSANTD4Q8NCY6 345 aa12.03□□□□□ -0.48
XRCC4-201ENST00000282268 TRIM58Q8NG06 486 aa12.03□□□□□ -0.48
XRCC4-201ENST00000282268 C18orf8Q96DM3 657 aa12.03□□□□□ -0.48
XRCC4-201ENST00000282268 PCED1BQ96HM7 432 aa12.03□□□□□ -0.48
XRCC4-201ENST00000282268 ZNF558Q96NG5 402 aa12.03□□□□□ -0.48
XRCC4-201ENST00000282268 ACBD6Q9BR61 282 aa12.03□□□□□ -0.48
XRCC4-201ENST00000282268 TRIM7Q9C029 511 aa12.03□□□□□ -0.48
XRCC4-201ENST00000282268 MIS12Q9H081 205 aa12.03□□□□□ -0.48
XRCC4-201ENST00000282268 KRT82Q9NSB4 513 aa12.03□□□□□ -0.48
XRCC4-201ENST00000282268 ANAPC7Q9UJX3 599 aa12.03□□□□□ -0.48
XRCC4-201ENST00000282268 SLC4A7Q9Y6M7 1214 aa12.03□□□□□ -0.48
XRCC4-201ENST00000282268 ATP8B3O60423 1300 aa12.02□□□□□ -0.49
XRCC4-201ENST00000282268 E5RJQ4 531 aa12.02□□□□□ -0.49
XRCC4-201ENST00000282268 BEST1O76090 585 aa12.02□□□□□ -0.49
XRCC4-201ENST00000282268 TUBB4AP04350 444 aa12.02□□□□□ -0.49
XRCC4-201ENST00000282268 FAM200BP0CF97 657 aa12.02□□□□□ -0.49
XRCC4-201ENST00000282268 CA8P35219 290 aa12.02□□□□□ -0.49
XRCC4-201ENST00000282268 BCAT1P54687 386 aa12.02□□□□□ -0.49
XRCC4-201ENST00000282268 RNASE9P60153 205 aaKnown RBP12.02□□□□□ -0.49
XRCC4-201ENST00000282268 BST2Q10589 180 aaKnown RBP12.02□□□□□ -0.49
XRCC4-201ENST00000282268 MAMLD1Q13495 774 aa12.02□□□□□ -0.49
XRCC4-201ENST00000282268 RTP2Q5QGT7 225 aa12.02□□□□□ -0.49
XRCC4-201ENST00000282268 PPP1R2P3Q6NXS1 205 aa12.02□□□□□ -0.49
XRCC4-201ENST00000282268 PRSS55Q6UWB4 352 aaPredicted RBP12.02□□□□□ -0.49
XRCC4-201ENST00000282268 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.02□□□□□ -0.49
XRCC4-201ENST00000282268 PAQR9Q6ZVX9 377 aa12.02□□□□□ -0.49
XRCC4-201ENST00000282268 FAM35AQ86V20 835 aa12.02□□□□□ -0.49
XRCC4-201ENST00000282268 CPNE8Q86YQ8 564 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms