RNA–Protein interactions for RNA: ENST00000277575.5

USP6NL-201, Transcript of USP6 N-terminal like, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP6NL, Length 4,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-201ENST00000277575 ACKR2O00590 384 aa11.76□□□□□ -0.53
USP6NL-201ENST00000277575 TMCC1O94876 653 aa11.76□□□□□ -0.53
USP6NL-201ENST00000277575 KCNA2P16389 499 aa11.76□□□□□ -0.53
USP6NL-201ENST00000277575 ATICP31939 592 aa11.76□□□□□ -0.53
USP6NL-201ENST00000277575 PTK7Q13308 1070 aa11.76□□□□□ -0.53
USP6NL-201ENST00000277575 USP50Q70EL3 339 aaPredicted RBP11.76□□□□□ -0.53
USP6NL-201ENST00000277575 TMEM176AQ96HP8 235 aa11.76□□□□□ -0.53
USP6NL-201ENST00000277575 FRMD8Q9BZ67 464 aaPredicted RBP11.76□□□□□ -0.53
USP6NL-201ENST00000277575 IFT172Q9UG01 1749 aa11.76□□□□□ -0.53
USP6NL-201ENST00000277575 FAM47DPA6NHR8 397 aa11.76□□□□□ -0.53
USP6NL-201ENST00000277575 ASMTLO95671 621 aa11.76□□□□□ -0.53
USP6NL-201ENST00000277575 SNRPAP09012 282 aaKnown RBP11.76□□□□□ -0.53
USP6NL-201ENST00000277575 PDAP1Q13442 181 aaKnown RBP11.76□□□□□ -0.53
USP6NL-201ENST00000277575 EFTUD2Q15029 972 aaKnown RBP eCLIP11.76□□□□□ -0.53
USP6NL-201ENST00000277575 CRY2Q49AN0 593 aa11.76□□□□□ -0.53
USP6NL-201ENST00000277575 FAXCQ5TGI0 409 aa11.76□□□□□ -0.53
USP6NL-201ENST00000277575 EMC1Q8N766 993 aa11.76□□□□□ -0.53
USP6NL-201ENST00000277575 ZIM3Q96PE6 472 aa11.76□□□□□ -0.53
USP6NL-201ENST00000277575 CNPY3Q9BT09 278 aa11.76□□□□□ -0.53
USP6NL-201ENST00000277575 CYP4F11Q9HBI6 524 aa11.76□□□□□ -0.53
USP6NL-201ENST00000277575 AAASQ9NRG9 546 aa11.76□□□□□ -0.53
USP6NL-201ENST00000277575 CPSF2Q9P2I0 782 aaKnown RBP11.76□□□□□ -0.53
USP6NL-201ENST00000277575 PCDHB8Q9UN66 801 aa11.76□□□□□ -0.53
USP6NL-201ENST00000277575 MYO1CO00159 1063 aa11.76□□□□□ -0.53
USP6NL-201ENST00000277575 IRF6O14896 467 aa11.76□□□□□ -0.53
USP6NL-201ENST00000277575 ZNF263O14978 683 aa11.76□□□□□ -0.53
USP6NL-201ENST00000277575 HOXA2O43364 376 aa11.76□□□□□ -0.53
USP6NL-201ENST00000277575 PMPCBO75439 489 aa11.76□□□□□ -0.53
USP6NL-201ENST00000277575 MCF2P10911 925 aa11.76□□□□□ -0.53
USP6NL-201ENST00000277575 CHN1P15882 459 aa11.76□□□□□ -0.53
USP6NL-201ENST00000277575 ETFBP38117 255 aa11.76□□□□□ -0.53
USP6NL-201ENST00000277575 RAP1GAPP47736 663 aa11.76□□□□□ -0.53
USP6NL-201ENST00000277575 ESRRGP62508 458 aa11.76□□□□□ -0.53
USP6NL-201ENST00000277575 CAPRIN1Q14444 709 aaKnown RBP11.76□□□□□ -0.53
USP6NL-201ENST00000277575 TAF2Q6P1X5 1199 aa11.76□□□□□ -0.53
USP6NL-201ENST00000277575 SPATA21Q7Z572 469 aa11.76□□□□□ -0.53
USP6NL-201ENST00000277575 FAM172AQ8WUF8 416 aa11.76□□□□□ -0.53
USP6NL-201ENST00000277575 TSPAN17Q96FV3 270 aa11.76□□□□□ -0.53
USP6NL-201ENST00000277575 ROPN1BQ9BZX4 212 aaPredicted RBP11.76□□□□□ -0.53
USP6NL-201ENST00000277575 TRIM15Q9C019 465 aa11.76□□□□□ -0.53
USP6NL-201ENST00000277575 FHDC1Q9C0D6 1143 aaPredicted RBP11.76□□□□□ -0.53
USP6NL-201ENST00000277575 L2HGDHQ9H9P8 463 aa11.76□□□□□ -0.53
USP6NL-201ENST00000277575 ROPN1Q9HAT0 212 aaPredicted RBP11.76□□□□□ -0.53
USP6NL-201ENST00000277575 XAB2Q9HCS7 855 aaKnown RBP11.76□□□□□ -0.53
USP6NL-201ENST00000277575 SNTG2Q9NY99 539 aa11.76□□□□□ -0.53
USP6NL-201ENST00000277575 ADA2Q9NZK5 511 aa11.76□□□□□ -0.53
USP6NL-201ENST00000277575 AP5Z1O43299 807 aa11.75□□□□□ -0.53
USP6NL-201ENST00000277575 PRLRP16471 622 aa11.75□□□□□ -0.53
USP6NL-201ENST00000277575 EEF1B2P24534 225 aaKnown RBP11.75□□□□□ -0.53
USP6NL-201ENST00000277575 AKT1P31749 480 aa11.75□□□□□ -0.53
USP6NL-201ENST00000277575 FAM131BQ86XD5 332 aa11.75□□□□□ -0.53
USP6NL-201ENST00000277575 ATP6V0D2Q8N8Y2 350 aa11.75□□□□□ -0.53
USP6NL-201ENST00000277575 CALML6Q8TD86 181 aa11.75□□□□□ -0.53
USP6NL-201ENST00000277575 TFB1MQ8WVM0 346 aaKnown RBP11.75□□□□□ -0.53
USP6NL-201ENST00000277575 SEPT8Q92599 483 aa11.75□□□□□ -0.53
USP6NL-201ENST00000277575 CCDC124Q96CT7 223 aaKnown RBP11.75□□□□□ -0.53
USP6NL-201ENST00000277575 PRMT1Q99873 361 aaKnown RBP11.75□□□□□ -0.53
USP6NL-201ENST00000277575 PCMTD2Q9NV79 361 aa11.75□□□□□ -0.53
USP6NL-201ENST00000277575 MEIS2O14770 477 aa11.75□□□□□ -0.53
USP6NL-201ENST00000277575 PROSCO94903 275 aa11.75□□□□□ -0.53
USP6NL-201ENST00000277575 LSM8O95777 96 aaKnown RBP11.75□□□□□ -0.53
USP6NL-201ENST00000277575 HIST1H2AGP0C0S8 130 aaPredicted RBP11.75□□□□□ -0.53
USP6NL-201ENST00000277575 AKR1A1P14550 325 aa11.75□□□□□ -0.53
USP6NL-201ENST00000277575 HIST1H2ADP20671 130 aa11.75□□□□□ -0.53
USP6NL-201ENST00000277575 STX3Q13277 289 aa11.75□□□□□ -0.53
USP6NL-201ENST00000277575 NFE2Q16621 373 aaPredicted RBP11.75□□□□□ -0.53
USP6NL-201ENST00000277575 TLK2Q86UE8 772 aa11.75□□□□□ -0.53
USP6NL-201ENST00000277575 ABRAQ8N0Z2 381 aa11.75□□□□□ -0.53
USP6NL-201ENST00000277575 LRRC43Q8N309 656 aa11.75□□□□□ -0.53
USP6NL-201ENST00000277575 HASPINQ8TF76 798 aa11.75□□□□□ -0.53
USP6NL-201ENST00000277575 ZNF606Q8WXB4 792 aa11.75□□□□□ -0.53
USP6NL-201ENST00000277575 BHMTQ93088 406 aa11.75□□□□□ -0.53
USP6NL-201ENST00000277575 FBXO32Q969P5 355 aa11.75□□□□□ -0.53
USP6NL-201ENST00000277575 HIST1H2AHQ96KK5 128 aa11.75□□□□□ -0.53
USP6NL-201ENST00000277575 HIST1H2AJQ99878 128 aa11.75□□□□□ -0.53
USP6NL-201ENST00000277575 H2AFJQ9BTM1 129 aa11.75□□□□□ -0.53
USP6NL-201ENST00000277575 ASB7Q9H672 318 aa11.75□□□□□ -0.53
USP6NL-201ENST00000277575 MGEA5O60502 916 aa11.75□□□□□ -0.53
USP6NL-201ENST00000277575 GCKP35557 465 aa11.75□□□□□ -0.53
USP6NL-201ENST00000277575 SLC11A2P49281 568 aa11.75□□□□□ -0.53
USP6NL-201ENST00000277575 PHEXP78562 749 aa11.75□□□□□ -0.53
USP6NL-201ENST00000277575 E2F4Q16254 413 aa11.75□□□□□ -0.53
USP6NL-201ENST00000277575 CTXN3Q4LDR2 81 aa11.75□□□□□ -0.53
USP6NL-201ENST00000277575 TFDP3Q5H9I0 405 aa11.75□□□□□ -0.53
USP6NL-201ENST00000277575 TMCO4Q5TGY1 634 aa11.75□□□□□ -0.53
USP6NL-201ENST00000277575 CATSPERGQ6ZRH7 1159 aa11.75□□□□□ -0.53
USP6NL-201ENST00000277575 MTG1Q9BT17 334 aaPredicted RBP11.75□□□□□ -0.53
USP6NL-201ENST00000277575 E2F6O75461 281 aa11.74□□□□□ -0.53
USP6NL-201ENST00000277575 IFNA8P32881 189 aa11.74□□□□□ -0.53
USP6NL-201ENST00000277575 ADCYAP1R1P41586 468 aa11.74□□□□□ -0.53
USP6NL-201ENST00000277575 LHX1P48742 406 aa11.74□□□□□ -0.53
USP6NL-201ENST00000277575 CTCFP49711 727 aaPredicted RBP11.74□□□□□ -0.53
USP6NL-201ENST00000277575 SH3BGRP55822 239 aaPredicted RBP11.74□□□□□ -0.53
USP6NL-201ENST00000277575 ZC3H15Q8WU90 426 aaKnown RBP11.74□□□□□ -0.53
USP6NL-201ENST00000277575 RXFP2Q8WXD0 754 aa11.74□□□□□ -0.53
USP6NL-201ENST00000277575 FAM161BQ96MY7 647 aa11.74□□□□□ -0.53
USP6NL-201ENST00000277575 TASP1Q9H6P5 420 aa11.74□□□□□ -0.53
USP6NL-201ENST00000277575 LRG1P02750 347 aa11.74□□□□□ -0.53
USP6NL-201ENST00000277575 KRT4P19013 534 aa11.74□□□□□ -0.53
USP6NL-201ENST00000277575 KCNA1Q09470 495 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms