RNA–Protein interactions for RNA: ENST00000275080.11

CD164-201, Transcript of CD164 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD164, Length 2,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD164-201ENST00000275080 ZACNQ401N2 412 aa9.59□□□□□ -0.87
CD164-201ENST00000275080 NBPF12Q5TAG4 269 aaPredicted RBP9.59□□□□□ -0.87
CD164-201ENST00000275080 RNF220Q5VTB9 566 aa9.59□□□□□ -0.87
CD164-201ENST00000275080 FYB2Q5VWT5 728 aa9.59□□□□□ -0.87
CD164-201ENST00000275080 RSBN1LQ6PCB5 846 aaPredicted RBP9.59□□□□□ -0.87
CD164-201ENST00000275080 DARS2Q6PI48 645 aaKnown RBP9.59□□□□□ -0.87
CD164-201ENST00000275080 MCF2L2Q86YR7 1114 aa9.59□□□□□ -0.87
CD164-201ENST00000275080 TMEM192Q8IY95 271 aa9.59□□□□□ -0.87
CD164-201ENST00000275080 ZCCHC9Q8N567 271 aaKnown RBP9.59□□□□□ -0.87
CD164-201ENST00000275080 PDCD7Q8N8D1 485 aaKnown RBP9.59□□□□□ -0.87
CD164-201ENST00000275080 WDR60Q8WVS4 1066 aa9.59□□□□□ -0.87
CD164-201ENST00000275080 SLC7A6OSQ96CW6 309 aaPredicted RBP9.59□□□□□ -0.87
CD164-201ENST00000275080 INO80BQ9C086 356 aaPredicted RBP9.59□□□□□ -0.87
CD164-201ENST00000275080 SMYD3Q9H7B4 428 aa9.59□□□□□ -0.87
CD164-201ENST00000275080 CISHQ9NSE2 258 aa9.59□□□□□ -0.87
CD164-201ENST00000275080 SCN9AQ15858 1988 aa9.59□□□□□ -0.87
CD164-201ENST00000275080 UBE4BO95155 1302 aa9.58□□□□□ -0.88
CD164-201ENST00000275080 CCDC78A2IDD5 438 aa9.58□□□□□ -0.88
CD164-201ENST00000275080 MEI4A8MW99 385 aa9.58□□□□□ -0.88
CD164-201ENST00000275080 CAPN9O14815 690 aa9.58□□□□□ -0.88
CD164-201ENST00000275080 EDF1O60869 148 aaKnown RBP9.58□□□□□ -0.88
CD164-201ENST00000275080 NPM3O75607 178 aaKnown RBP9.58□□□□□ -0.88
CD164-201ENST00000275080 STAM2O75886 525 aa9.58□□□□□ -0.88
CD164-201ENST00000275080 TMEM63AO94886 807 aa9.58□□□□□ -0.88
CD164-201ENST00000275080 APRTP07741 180 aa9.58□□□□□ -0.88
CD164-201ENST00000275080 RBP3P10745 1247 aa9.58□□□□□ -0.88
CD164-201ENST00000275080 MYL2P10916 166 aa9.58□□□□□ -0.88
CD164-201ENST00000275080 RFC5P40937 340 aa9.58□□□□□ -0.88
CD164-201ENST00000275080 ELK3P41970 407 aa9.58□□□□□ -0.88
CD164-201ENST00000275080 ALDH18A1P54886 795 aaKnown RBP9.58□□□□□ -0.88
CD164-201ENST00000275080 PSMC1P62191 440 aaKnown RBP9.58□□□□□ -0.88
CD164-201ENST00000275080 PPP2R5DQ14738 602 aa9.58□□□□□ -0.88
CD164-201ENST00000275080 NFIL3Q16649 462 aa9.58□□□□□ -0.88
CD164-201ENST00000275080 C15orf59Q2T9L4 293 aaPredicted RBP9.58□□□□□ -0.88
CD164-201ENST00000275080 MROH9Q5TGP6 573 aa9.58□□□□□ -0.88
CD164-201ENST00000275080 CASC4Q6P4E1 433 aa9.58□□□□□ -0.88
CD164-201ENST00000275080 TMEM154Q6P9G4 183 aa9.58□□□□□ -0.88
CD164-201ENST00000275080 CRELD2Q6UXH1 353 aaPredicted RBP9.58□□□□□ -0.88
CD164-201ENST00000275080 ASRGL1Q7L266 308 aa9.58□□□□□ -0.88
CD164-201ENST00000275080 PRPF39Q86UA1 669 aaKnown RBP9.58□□□□□ -0.88
CD164-201ENST00000275080 SPATA18Q8TC71 538 aa9.58□□□□□ -0.88
CD164-201ENST00000275080 C7orf43Q8WVR3 580 aa9.58□□□□□ -0.88
CD164-201ENST00000275080 SLC7A3Q8WY07 619 aa9.58□□□□□ -0.88
CD164-201ENST00000275080 MFSD14AQ96MC6 490 aa9.58□□□□□ -0.88
CD164-201ENST00000275080 FAM161BQ96MY7 647 aa9.58□□□□□ -0.88
CD164-201ENST00000275080 MMP19Q99542 508 aa9.58□□□□□ -0.88
CD164-201ENST00000275080 MIPEPQ99797 713 aa9.58□□□□□ -0.88
CD164-201ENST00000275080 TMEM109Q9BVC6 243 aa9.58□□□□□ -0.88
CD164-201ENST00000275080 WASF2Q9Y6W5 498 aa9.58□□□□□ -0.88
CD164-201ENST00000275080 CLUHO75153 1309 aa9.58□□□□□ -0.88
CD164-201ENST00000275080 E5RJQ4 531 aa9.58□□□□□ -0.88
CD164-201ENST00000275080 B4GALT5O43286 388 aa9.58□□□□□ -0.88
CD164-201ENST00000275080 PEX11AO75192 247 aa9.58□□□□□ -0.88
CD164-201ENST00000275080 C4BPAP04003 597 aaKnown RBP9.58□□□□□ -0.88
CD164-201ENST00000275080 KRT3P12035 628 aa9.58□□□□□ -0.88
CD164-201ENST00000275080 PTGER2P43116 358 aa9.58□□□□□ -0.88
CD164-201ENST00000275080 GCNT1Q02742 428 aa9.58□□□□□ -0.88
CD164-201ENST00000275080 CENPCQ03188 943 aa9.58□□□□□ -0.88
CD164-201ENST00000275080 THOC5Q13769 683 aaKnown RBP9.58□□□□□ -0.88
CD164-201ENST00000275080 SPDYCQ5MJ68 293 aa9.58□□□□□ -0.88
CD164-201ENST00000275080 DENND1BQ6P3S1 775 aa9.58□□□□□ -0.88
CD164-201ENST00000275080 CLNKQ7Z7G1 428 aa9.58□□□□□ -0.88
CD164-201ENST00000275080 UNC5BQ8IZJ1 945 aa9.58□□□□□ -0.88
CD164-201ENST00000275080 POU5F2Q8N7G0 328 aa9.58□□□□□ -0.88
CD164-201ENST00000275080 C12orf50Q8NA57 414 aaPredicted RBP9.58□□□□□ -0.88
CD164-201ENST00000275080 RNF149Q8NC42 400 aa9.58□□□□□ -0.88
CD164-201ENST00000275080 ARMC2Q8NEN0 867 aa9.58□□□□□ -0.88
CD164-201ENST00000275080 SPDYE1Q8NFV5 336 aaPredicted RBP9.58□□□□□ -0.88
CD164-201ENST00000275080 MORC4Q8TE76 937 aa9.58□□□□□ -0.88
CD164-201ENST00000275080 ATP6V0A1Q93050 837 aa9.58□□□□□ -0.88
CD164-201ENST00000275080 MOCOSQ96EN8 888 aa9.58□□□□□ -0.88
CD164-201ENST00000275080 SERAC1Q96JX3 654 aa9.58□□□□□ -0.88
CD164-201ENST00000275080 RAB3IPQ96QF0 476 aaPredicted RBP9.58□□□□□ -0.88
CD164-201ENST00000275080 CCDC134Q9H6E4 229 aa9.58□□□□□ -0.88
CD164-201ENST00000275080 MANSC1Q9H8J5 431 aa9.58□□□□□ -0.88
CD164-201ENST00000275080 PPARGC1AQ9UBK2 798 aaKnown RBP9.58□□□□□ -0.88
CD164-201ENST00000275080 HMGXB4Q9UGU5 601 aa9.58□□□□□ -0.88
CD164-201ENST00000275080 EXTL3O43909 919 aa9.57□□□□□ -0.88
CD164-201ENST00000275080 USP1O94782 785 aa9.57□□□□□ -0.88
CD164-201ENST00000275080 INHBAP08476 426 aa9.57□□□□□ -0.88
CD164-201ENST00000275080 TROVE2P10155 538 aaKnown RBP eCLIP9.57□□□□□ -0.88
CD164-201ENST00000275080 ESRRAP11474 423 aaPredicted RBP9.57□□□□□ -0.88
CD164-201ENST00000275080 RPL22P35268 128 aaKnown RBP9.57□□□□□ -0.88
CD164-201ENST00000275080 SLC1A1P43005 524 aa9.57□□□□□ -0.88
CD164-201ENST00000275080 ARFIP2P53365 341 aa9.57□□□□□ -0.88
CD164-201ENST00000275080 KRT76Q01546 638 aa9.57□□□□□ -0.88
CD164-201ENST00000275080 TRAF1Q13077 416 aa9.57□□□□□ -0.88
CD164-201ENST00000275080 PTK7Q13308 1070 aa9.57□□□□□ -0.88
CD164-201ENST00000275080 TFDP3Q5H9I0 405 aa9.57□□□□□ -0.88
CD164-201ENST00000275080 CDHR3Q6ZTQ4 885 aa9.57□□□□□ -0.88
CD164-201ENST00000275080 ARID3BQ8IVW6 561 aaPredicted RBP9.57□□□□□ -0.88
CD164-201ENST00000275080 MAIP1Q8WWC4 291 aa9.57□□□□□ -0.88
CD164-201ENST00000275080 CPT1BQ92523 772 aa9.57□□□□□ -0.88
CD164-201ENST00000275080 PIWIL1Q96J94 861 aaKnown RBP9.57□□□□□ -0.88
CD164-201ENST00000275080 TSSK1BQ9BXA7 367 aa9.57□□□□□ -0.88
CD164-201ENST00000275080 RNPEPL1Q9HAU8 725 aa9.57□□□□□ -0.88
CD164-201ENST00000275080 CYP4F11Q9HBI6 524 aa9.57□□□□□ -0.88
CD164-201ENST00000275080 NGRNQ9NPE2 291 aaKnown RBP9.57□□□□□ -0.88
CD164-201ENST00000275080 RAB6BQ9NRW1 208 aa9.57□□□□□ -0.88
CD164-201ENST00000275080 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms