RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 SPATA31A1Q5TZJ5 1347 aa9.65□□□□□ -0.87
PDGFC-201ENST00000274071 EYA2O00167 538 aa9.64□□□□□ -0.87
PDGFC-201ENST00000274071 FCHO1O14526 889 aa9.64□□□□□ -0.87
PDGFC-201ENST00000274071 TRPA1O75762 1119 aa9.64□□□□□ -0.87
PDGFC-201ENST00000274071 DDHD2O94830 711 aa9.64□□□□□ -0.87
PDGFC-201ENST00000274071 CRTAMO95727 393 aa9.64□□□□□ -0.87
PDGFC-201ENST00000274071 FAM58BPP0C7Q3 252 aa9.64□□□□□ -0.87
PDGFC-201ENST00000274071 ALAS1P13196 640 aa9.64□□□□□ -0.87
PDGFC-201ENST00000274071 ZNF23P17027 643 aa9.64□□□□□ -0.87
PDGFC-201ENST00000274071 KRT4P19013 534 aa9.64□□□□□ -0.87
PDGFC-201ENST00000274071 CLK3P49761 638 aaKnown RBP9.64□□□□□ -0.87
PDGFC-201ENST00000274071 CDONQ4KMG0 1287 aa9.64□□□□□ -0.87
PDGFC-201ENST00000274071 BTBD8Q5XKL5 378 aa9.64□□□□□ -0.87
PDGFC-201ENST00000274071 CLVS1Q8IUQ0 354 aaPredicted RBP9.64□□□□□ -0.87
PDGFC-201ENST00000274071 GIPC2Q8TF65 315 aa9.64□□□□□ -0.87
PDGFC-201ENST00000274071 ALG3Q92685 438 aa9.64□□□□□ -0.87
PDGFC-201ENST00000274071 CCDC138Q96M89 665 aa9.64□□□□□ -0.87
PDGFC-201ENST00000274071 POP1Q99575 1024 aaKnown RBP9.64□□□□□ -0.87
PDGFC-201ENST00000274071 CDCA7Q9BWT1 371 aaPredicted RBP9.64□□□□□ -0.87
PDGFC-201ENST00000274071 NMUR2Q9GZQ4 415 aa9.64□□□□□ -0.87
PDGFC-201ENST00000274071 KLHL25Q9H0H3 589 aa9.64□□□□□ -0.87
PDGFC-201ENST00000274071 MARCH7Q9H992 704 aa9.64□□□□□ -0.87
PDGFC-201ENST00000274071 DDX56Q9NY93 547 aaKnown RBP9.64□□□□□ -0.87
PDGFC-201ENST00000274071 EBF1Q9UH73 591 aa9.64□□□□□ -0.87
PDGFC-201ENST00000274071 HERC5Q9UII4 1024 aaKnown RBP9.64□□□□□ -0.87
PDGFC-201ENST00000274071 SCINQ9Y6U3 715 aa9.64□□□□□ -0.87
PDGFC-201ENST00000274071 ZSCAN5BA6NJL1 495 aa9.64□□□□□ -0.87
PDGFC-201ENST00000274071 J3QRK9 145 aa9.64□□□□□ -0.87
PDGFC-201ENST00000274071 CASQ2O14958 399 aaPredicted RBP9.64□□□□□ -0.87
PDGFC-201ENST00000274071 THAP12O43422 761 aa9.64□□□□□ -0.87
PDGFC-201ENST00000274071 ESRRBO95718 433 aa9.64□□□□□ -0.87
PDGFC-201ENST00000274071 PCCAP05165 728 aaPredicted RBP9.64□□□□□ -0.87
PDGFC-201ENST00000274071 ENO1P06733 434 aaKnown RBP9.64□□□□□ -0.87
PDGFC-201ENST00000274071 GYS1P13807 737 aa9.64□□□□□ -0.87
PDGFC-201ENST00000274071 ALDH3B2P48448 385 aa9.64□□□□□ -0.87
PDGFC-201ENST00000274071 SLC18A1P54219 525 aa9.64□□□□□ -0.87
PDGFC-201ENST00000274071 NPEPPSP55786 919 aa9.64□□□□□ -0.87
PDGFC-201ENST00000274071 RALGDSQ12967 914 aa9.64□□□□□ -0.87
PDGFC-201ENST00000274071 CALCOCO2Q13137 446 aa9.64□□□□□ -0.87
PDGFC-201ENST00000274071 ZYXQ15942 572 aaKnown RBP9.64□□□□□ -0.87
PDGFC-201ENST00000274071 BOLA3Q53S33 107 aa9.64□□□□□ -0.87
PDGFC-201ENST00000274071 KYAT3Q6YP21 454 aaKnown RBP9.64□□□□□ -0.87
PDGFC-201ENST00000274071 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.64□□□□□ -0.87
PDGFC-201ENST00000274071 C4orf33Q8N1A6 199 aa9.64□□□□□ -0.87
PDGFC-201ENST00000274071 TRIML2Q8N7C3 387 aa9.64□□□□□ -0.87
PDGFC-201ENST00000274071 Q8N9G6 341 aaPredicted RBP9.64□□□□□ -0.87
PDGFC-201ENST00000274071 HSPH1Q92598 858 aa9.64□□□□□ -0.87
PDGFC-201ENST00000274071 FBXL8Q96CD0 374 aa9.64□□□□□ -0.87
PDGFC-201ENST00000274071 THAP11Q96EK4 314 aa9.64□□□□□ -0.87
PDGFC-201ENST00000274071 TMEM120AQ9BXJ8 343 aa9.64□□□□□ -0.87
PDGFC-201ENST00000274071 CCDC177Q9NQR7 707 aaPredicted RBP9.64□□□□□ -0.87
PDGFC-201ENST00000274071 GNPTGQ9UJJ9 305 aa9.64□□□□□ -0.87
PDGFC-201ENST00000274071 PADI4Q9UM07 663 aa9.64□□□□□ -0.87
PDGFC-201ENST00000274071 ERGIC3Q9Y282 383 aa9.64□□□□□ -0.87
PDGFC-201ENST00000274071 MTO1Q9Y2Z2 717 aaKnown RBP9.64□□□□□ -0.87
PDGFC-201ENST00000274071 DTNAQ9Y4J8 743 aa9.64□□□□□ -0.87
PDGFC-201ENST00000274071 A0A0A6YYK5 440 aaPredicted RBP9.63□□□□□ -0.87
PDGFC-201ENST00000274071 CLOCKO15516 846 aa9.63□□□□□ -0.87
PDGFC-201ENST00000274071 CA4P22748 312 aa9.63□□□□□ -0.87
PDGFC-201ENST00000274071 PRDX6P30041 224 aa9.63□□□□□ -0.87
PDGFC-201ENST00000274071 IFNA8P32881 189 aa9.63□□□□□ -0.87
PDGFC-201ENST00000274071 S100A5P33763 92 aa9.63□□□□□ -0.87
PDGFC-201ENST00000274071 KCNJ1P48048 391 aa9.63□□□□□ -0.87
PDGFC-201ENST00000274071 KDSRQ06136 332 aa9.63□□□□□ -0.87
PDGFC-201ENST00000274071 NPY5RQ15761 445 aa9.63□□□□□ -0.87
PDGFC-201ENST00000274071 LSMEM1Q8N8F7 131 aa9.63□□□□□ -0.87
PDGFC-201ENST00000274071 ZBTB38Q8NAP3 1195 aaPredicted RBP9.63□□□□□ -0.87
PDGFC-201ENST00000274071 TBC1D15Q8TC07 691 aa9.63□□□□□ -0.87
PDGFC-201ENST00000274071 BRSK1Q8TDC3 778 aa9.63□□□□□ -0.87
PDGFC-201ENST00000274071 RPGRQ92834 1020 aaKnown RBP9.63□□□□□ -0.87
PDGFC-201ENST00000274071 ATP2A3Q93084 1043 aa9.63□□□□□ -0.87
PDGFC-201ENST00000274071 DCUN1D1Q96GG9 259 aa9.63□□□□□ -0.87
PDGFC-201ENST00000274071 TRIM9Q9C026 710 aa9.63□□□□□ -0.87
PDGFC-201ENST00000274071 Q9H521 79 aa9.63□□□□□ -0.87
PDGFC-201ENST00000274071 AP4B1Q9Y6B7 739 aa9.63□□□□□ -0.87
PDGFC-201ENST00000274071 FLT1P17948 1338 aa9.63□□□□□ -0.87
PDGFC-201ENST00000274071 PLCH1Q4KWH8 1693 aa9.63□□□□□ -0.87
PDGFC-201ENST00000274071 PHLPP1O60346 1717 aa9.63□□□□□ -0.87
PDGFC-201ENST00000274071 CAPN14A8MX76 684 aa9.63□□□□□ -0.87
PDGFC-201ENST00000274071 POTECB2RU33 542 aa9.63□□□□□ -0.87
PDGFC-201ENST00000274071 B4GALT4O60513 344 aa9.63□□□□□ -0.87
PDGFC-201ENST00000274071 H2AFZP0C0S5 128 aa9.63□□□□□ -0.87
PDGFC-201ENST00000274071 POLR2MP0CAP2 368 aa9.63□□□□□ -0.87
PDGFC-201ENST00000274071 BMXP51813 675 aa9.63□□□□□ -0.87
PDGFC-201ENST00000274071 PEX3P56589 373 aa9.63□□□□□ -0.87
PDGFC-201ENST00000274071 CTBSQ01459 385 aa9.63□□□□□ -0.87
PDGFC-201ENST00000274071 KRT76Q01546 638 aa9.63□□□□□ -0.87
PDGFC-201ENST00000274071 CCNIQ14094 377 aa9.63□□□□□ -0.87
PDGFC-201ENST00000274071 EFHC1Q5JVL4 640 aa9.63□□□□□ -0.87
PDGFC-201ENST00000274071 OGFRL1Q5TC84 451 aaPredicted RBP9.63□□□□□ -0.87
PDGFC-201ENST00000274071 ARL6IP4Q66PJ3 421 aaKnown RBP9.63□□□□□ -0.87
PDGFC-201ENST00000274071 H2AFVQ71UI9 128 aa9.63□□□□□ -0.87
PDGFC-201ENST00000274071 CYP2U1Q7Z449 544 aa9.63□□□□□ -0.87
PDGFC-201ENST00000274071 CCDC105Q8IYK2 499 aa9.63□□□□□ -0.87
PDGFC-201ENST00000274071 SYNE4Q8N205 404 aa9.63□□□□□ -0.87
PDGFC-201ENST00000274071 FANCBQ8NB91 859 aa9.63□□□□□ -0.87
PDGFC-201ENST00000274071 TSPAN14Q8NG11 270 aa9.63□□□□□ -0.87
PDGFC-201ENST00000274071 OXNAD1Q96HP4 312 aaPredicted RBP9.63□□□□□ -0.87
PDGFC-201ENST00000274071 CEP63Q96MT8 703 aa9.63□□□□□ -0.87
PDGFC-201ENST00000274071 OLFM1Q99784 485 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms