RNA–Protein interactions for RNA: ENST00000273960.7

HERC6-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 1 (best) BASIC

Gene HERC6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-202ENST00000273960 RAG1P15918 1043 aa13.43□□□□□ -0.26
HERC6-202ENST00000273960 RXRBP28702 533 aa13.43□□□□□ -0.26
HERC6-202ENST00000273960 YWHAGP61981 247 aaKnown RBP eCLIP13.43□□□□□ -0.26
HERC6-202ENST00000273960 PDK1Q15118 436 aa13.43□□□□□ -0.26
HERC6-202ENST00000273960 FBXL19Q6PCT2 694 aa13.43□□□□□ -0.26
HERC6-202ENST00000273960 DEFB132Q7Z7B7 95 aa13.43□□□□□ -0.26
HERC6-202ENST00000273960 PARVGQ9HBI0 331 aa13.43□□□□□ -0.26
HERC6-202ENST00000273960 PAIP2BQ9ULR5 123 aaKnown RBP13.43□□□□□ -0.26
HERC6-202ENST00000273960 PNMA6FA0A0J9YX94 578 aa13.43□□□□□ -0.26
HERC6-202ENST00000273960 TTLL13PA6NNM8 815 aa13.43□□□□□ -0.26
HERC6-202ENST00000273960 H3BSA7 217 aa13.43□□□□□ -0.26
HERC6-202ENST00000273960 CFBP00751 764 aa13.43□□□□□ -0.26
HERC6-202ENST00000273960 IL1R1P14778 569 aa13.43□□□□□ -0.26
HERC6-202ENST00000273960 ANXA13P27216 316 aa13.43□□□□□ -0.26
HERC6-202ENST00000273960 FOLH1Q04609 750 aa13.43□□□□□ -0.26
HERC6-202ENST00000273960 BMPR2Q13873 1038 aa13.43□□□□□ -0.26
HERC6-202ENST00000273960 CRY2Q49AN0 593 aa13.43□□□□□ -0.26
HERC6-202ENST00000273960 MSS51Q4VC12 460 aa13.43□□□□□ -0.26
HERC6-202ENST00000273960 C1orf228Q6PIY5 440 aa13.43□□□□□ -0.26
HERC6-202ENST00000273960 LRRN4Q8WUT4 740 aa13.43□□□□□ -0.26
HERC6-202ENST00000273960 TTC25Q96NG3 672 aa13.43□□□□□ -0.26
HERC6-202ENST00000273960 HAPLN3Q96S86 360 aa13.43□□□□□ -0.26
HERC6-202ENST00000273960 SENP7Q9BQF6 1050 aa13.43□□□□□ -0.26
HERC6-202ENST00000273960 XPOTO43592 962 aaKnown RBP13.43□□□□□ -0.26
HERC6-202ENST00000273960 MXI1P50539 228 aa13.43□□□□□ -0.26
HERC6-202ENST00000273960 MSLNQ13421 630 aaPredicted RBP13.43□□□□□ -0.26
HERC6-202ENST00000273960 NLRX1Q86UT6 975 aa13.43□□□□□ -0.26
HERC6-202ENST00000273960 RNF169Q8NCN4 708 aa13.43□□□□□ -0.26
HERC6-202ENST00000273960 ETNPPLQ8TBG4 499 aa13.43□□□□□ -0.26
HERC6-202ENST00000273960 KREMEN1Q96MU8 473 aa13.43□□□□□ -0.26
HERC6-202ENST00000273960 P2RX7Q99572 595 aaKnown RBP13.43□□□□□ -0.26
HERC6-202ENST00000273960 DCUN1D5Q9BTE7 237 aa13.43□□□□□ -0.26
HERC6-202ENST00000273960 STK32BQ9NY57 414 aa13.43□□□□□ -0.26
HERC6-202ENST00000273960 BTBD7Q9P203 1132 aa13.43□□□□□ -0.26
HERC6-202ENST00000273960 LZTS1Q9Y250 596 aa13.43□□□□□ -0.26
HERC6-202ENST00000273960 ATP2A1O14983 1001 aa13.42□□□□□ -0.26
HERC6-202ENST00000273960 SLC16A3O15427 465 aaKnown RBP13.42□□□□□ -0.26
HERC6-202ENST00000273960 PRPF4O43172 522 aaKnown RBP eCLIP13.42□□□□□ -0.26
HERC6-202ENST00000273960 TOM1L1O75674 476 aa13.42□□□□□ -0.26
HERC6-202ENST00000273960 PROCP04070 461 aa13.42□□□□□ -0.26
HERC6-202ENST00000273960 VAMP7P51809 220 aa13.42□□□□□ -0.26
HERC6-202ENST00000273960 CYLC2Q14093 348 aaPredicted RBP13.42□□□□□ -0.26
HERC6-202ENST00000273960 HIC1Q14526 733 aa13.42□□□□□ -0.26
HERC6-202ENST00000273960 ANKRD22Q5VYY1 191 aa13.42□□□□□ -0.26
HERC6-202ENST00000273960 RNF111Q6ZNA4 994 aa13.42□□□□□ -0.26
HERC6-202ENST00000273960 DHDDSQ86SQ9 333 aa13.42□□□□□ -0.26
HERC6-202ENST00000273960 TMPRSS6Q8IU80 811 aa13.42□□□□□ -0.26
HERC6-202ENST00000273960 ICA1LQ8NDH6 482 aa13.42□□□□□ -0.26
HERC6-202ENST00000273960 POMGNT1Q8WZA1 660 aa13.42□□□□□ -0.26
HERC6-202ENST00000273960 RIOX1Q9H6W3 641 aa13.42□□□□□ -0.26
HERC6-202ENST00000273960 CYLDQ9NQC7 956 aa13.42□□□□□ -0.26
HERC6-202ENST00000273960 ARHGEF4Q9NR80 690 aa13.42□□□□□ -0.26
HERC6-202ENST00000273960 MTO1Q9Y2Z2 717 aaKnown RBP13.42□□□□□ -0.26
HERC6-202ENST00000273960 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.42□□□□□ -0.26
HERC6-202ENST00000273960 I3L4J1 428 aa13.42□□□□□ -0.26
HERC6-202ENST00000273960 FDX1P10109 184 aa13.42□□□□□ -0.26
HERC6-202ENST00000273960 CDK4P11802 303 aa13.42□□□□□ -0.26
HERC6-202ENST00000273960 CYP11B1P15538 503 aa13.42□□□□□ -0.26
HERC6-202ENST00000273960 NCF2P19878 526 aaPredicted RBP13.42□□□□□ -0.26
HERC6-202ENST00000273960 EIF4BP23588 611 aaKnown RBP13.42□□□□□ -0.26
HERC6-202ENST00000273960 STT3AP46977 705 aa13.42□□□□□ -0.26
HERC6-202ENST00000273960 BASP1P80723 227 aaKnown RBP13.42□□□□□ -0.26
HERC6-202ENST00000273960 PPIDQ08752 370 aaKnown RBP13.42□□□□□ -0.26
HERC6-202ENST00000273960 FAAP100Q0VG06 881 aa13.42□□□□□ -0.26
HERC6-202ENST00000273960 CHI3L2Q15782 390 aa13.42□□□□□ -0.26
HERC6-202ENST00000273960 QRICH1Q2TAL8 776 aa13.42□□□□□ -0.26
HERC6-202ENST00000273960 B3GNT6Q6ZMB0 384 aa13.42□□□□□ -0.26
HERC6-202ENST00000273960 HPS6Q86YV9 775 aa13.42□□□□□ -0.26
HERC6-202ENST00000273960 CCDC97Q96F63 343 aaPredicted RBP13.42□□□□□ -0.26
HERC6-202ENST00000273960 CFAP36Q96G28 342 aa13.42□□□□□ -0.26
HERC6-202ENST00000273960 SERAC1Q96JX3 654 aa13.42□□□□□ -0.26
HERC6-202ENST00000273960 HOMER2Q9NSB8 354 aa13.42□□□□□ -0.26
HERC6-202ENST00000273960 TMEM150BA6NC51 233 aa13.41□□□□□ -0.26
HERC6-202ENST00000273960 DLDP09622 509 aaKnown RBP13.41□□□□□ -0.26
HERC6-202ENST00000273960 PABPC4LP0CB38 370 aaKnown RBP13.41□□□□□ -0.26
HERC6-202ENST00000273960 UQCRBP14927 111 aa13.41□□□□□ -0.26
HERC6-202ENST00000273960 GEMIN4P57678 1058 aaKnown RBP13.41□□□□□ -0.26
HERC6-202ENST00000273960 C16orf72Q14CZ0 275 aa13.41□□□□□ -0.26
HERC6-202ENST00000273960 CENPUQ71F23 418 aa13.41□□□□□ -0.26
HERC6-202ENST00000273960 POLNQ7Z5Q5 900 aa13.41□□□□□ -0.26
HERC6-202ENST00000273960 CPXCR1Q8N123 301 aa13.41□□□□□ -0.26
HERC6-202ENST00000273960 ZCCHC9Q8N567 271 aaKnown RBP13.41□□□□□ -0.26
HERC6-202ENST00000273960 FBXO36Q8NEA4 188 aa13.41□□□□□ -0.26
HERC6-202ENST00000273960 ZFP28Q8NHY6 868 aa13.41□□□□□ -0.26
HERC6-202ENST00000273960 SKA1Q96BD8 255 aa13.41□□□□□ -0.26
HERC6-202ENST00000273960 CATSPER2Q96P56 530 aa13.41□□□□□ -0.26
HERC6-202ENST00000273960 INPP5FQ9Y2H2 1132 aa13.41□□□□□ -0.26
HERC6-202ENST00000273960 LTBP4Q8N2S1 1624 aa13.41□□□□□ -0.26
HERC6-202ENST00000273960 VILLO15195 856 aa13.41□□□□□ -0.26
HERC6-202ENST00000273960 GLRA2P23416 452 aa13.41□□□□□ -0.26
HERC6-202ENST00000273960 CHN2P52757 468 aa13.41□□□□□ -0.26
HERC6-202ENST00000273960 GPX6P59796 221 aa13.41□□□□□ -0.26
HERC6-202ENST00000273960 EML3Q32P44 896 aa13.41□□□□□ -0.26
HERC6-202ENST00000273960 ACAD11Q709F0 780 aa13.41□□□□□ -0.26
HERC6-202ENST00000273960 AMIGO2Q86SJ2 522 aa13.41□□□□□ -0.26
HERC6-202ENST00000273960 SEMA4DQ92854 862 aa13.41□□□□□ -0.26
HERC6-202ENST00000273960 IFT122Q9HBG6 1241 aa13.41□□□□□ -0.26
HERC6-202ENST00000273960 USP29Q9HBJ7 922 aa13.41□□□□□ -0.26
HERC6-202ENST00000273960 XPNPEP1Q9NQW7 623 aa13.41□□□□□ -0.26
HERC6-202ENST00000273960 ACTL7BQ9Y614 415 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms