RNA–Protein interactions for RNA: ENST00000267260.4

SRRM4-201, Transcript of serine/arginine repetitive matrix 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRRM4, Length 8,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4-201ENST00000267260 TM9SF1O15321 606 aa12.56□□□□□ -0.4
SRRM4-201ENST00000267260 GDF11O95390 407 aa12.56□□□□□ -0.4
SRRM4-201ENST00000267260 HOXD10P28358 340 aa12.56□□□□□ -0.4
SRRM4-201ENST00000267260 SNRPFP62306 86 aaKnown RBP12.56□□□□□ -0.4
SRRM4-201ENST00000267260 SNX30Q5VWJ9 437 aa12.56□□□□□ -0.4
SRRM4-201ENST00000267260 SUGP1Q8IWZ8 645 aaKnown RBP12.56□□□□□ -0.4
SRRM4-201ENST00000267260 ZCCHC18P0CG32 403 aa12.55□□□□□ -0.4
SRRM4-201ENST00000267260 ATP6V1C1P21283 382 aa12.55□□□□□ -0.4
SRRM4-201ENST00000267260 HNMTP50135 292 aa12.55□□□□□ -0.4
SRRM4-201ENST00000267260 SMAD5Q99717 465 aaKnown RBP12.55□□□□□ -0.4
SRRM4-201ENST00000267260 APBB2Q92870 758 aa12.55□□□□□ -0.4
SRRM4-201ENST00000267260 EFCAB1Q9HAE3 211 aa12.55□□□□□ -0.4
SRRM4-201ENST00000267260 CLRN2A0PK11 232 aa12.55□□□□□ -0.4
SRRM4-201ENST00000267260 VWA5AO00534 786 aa12.55□□□□□ -0.4
SRRM4-201ENST00000267260 DARSP14868 501 aaKnown RBP12.55□□□□□ -0.4
SRRM4-201ENST00000267260 NQO1P15559 274 aaKnown RBP12.55□□□□□ -0.4
SRRM4-201ENST00000267260 ADARP55265 1226 aaKnown RBP12.55□□□□□ -0.4
SRRM4-201ENST00000267260 GEMIN4P57678 1058 aaKnown RBP12.55□□□□□ -0.4
SRRM4-201ENST00000267260 SFSWAPQ12872 951 aaKnown RBP12.55□□□□□ -0.4
SRRM4-201ENST00000267260 GSTA3Q16772 222 aa12.55□□□□□ -0.4
SRRM4-201ENST00000267260 EEPD1Q7L9B9 569 aa12.55□□□□□ -0.4
SRRM4-201ENST00000267260 OOSP2Q86WS3 158 aa12.55□□□□□ -0.4
SRRM4-201ENST00000267260 ZNF333Q96JL9 665 aa12.55□□□□□ -0.4
SRRM4-201ENST00000267260 APEX2Q9UBZ4 518 aa12.55□□□□□ -0.4
SRRM4-201ENST00000267260 SH3GLB1Q9Y371 365 aa12.55□□□□□ -0.4
SRRM4-201ENST00000267260 CDC25AP30304 524 aa12.55□□□□□ -0.4
SRRM4-201ENST00000267260 LONRF1Q17RB8 773 aa12.55□□□□□ -0.4
SRRM4-201ENST00000267260 PRMT9Q6P2P2 845 aa12.55□□□□□ -0.4
SRRM4-201ENST00000267260 SLC35G2Q8TBE7 412 aa12.55□□□□□ -0.4
SRRM4-201ENST00000267260 NSUN6Q8TEA1 469 aaKnown RBP12.55□□□□□ -0.4
SRRM4-201ENST00000267260 PPP1R14BQ96C90 147 aa12.55□□□□□ -0.4
SRRM4-201ENST00000267260 RSAD1Q9HA92 442 aa12.55□□□□□ -0.4
SRRM4-201ENST00000267260 MAN1C1Q9NR34 630 aa12.55□□□□□ -0.4
SRRM4-201ENST00000267260 ARHGEF5Q12774 1597 aa12.55□□□□□ -0.4
SRRM4-201ENST00000267260 P4HBP07237 508 aaKnown RBP12.55□□□□□ -0.4
SRRM4-201ENST00000267260 CNTFP26441 200 aa12.55□□□□□ -0.4
SRRM4-201ENST00000267260 TWF1Q12792 350 aa12.55□□□□□ -0.4
SRRM4-201ENST00000267260 ZCCHC8Q6NZY4 707 aaKnown RBP12.55□□□□□ -0.4
SRRM4-201ENST00000267260 IZUMO1Q8IYV9 350 aa12.55□□□□□ -0.4
SRRM4-201ENST00000267260 TBX22Q9Y458 520 aa12.55□□□□□ -0.4
SRRM4-201ENST00000267260 TMEM120BA0PK00 339 aa12.55□□□□□ -0.4
SRRM4-201ENST00000267260 TNFAIP8O95379 198 aa12.55□□□□□ -0.4
SRRM4-201ENST00000267260 CENPCQ03188 943 aa12.55□□□□□ -0.4
SRRM4-201ENST00000267260 ILF2Q12905 390 aaKnown RBP12.55□□□□□ -0.4
SRRM4-201ENST00000267260 CCDC24Q8N4L8 307 aa12.55□□□□□ -0.4
SRRM4-201ENST00000267260 RDM1Q8NG50 284 aa12.55□□□□□ -0.4
SRRM4-201ENST00000267260 LRRIQ1Q96JM4 1722 aa12.55□□□□□ -0.4
SRRM4-201ENST00000267260 IL18RAPO95256 599 aa12.55□□□□□ -0.4
SRRM4-201ENST00000267260 ATP1A1P05023 1023 aaKnown RBP12.55□□□□□ -0.4
SRRM4-201ENST00000267260 MZT2BQ6NZ67 158 aa12.55□□□□□ -0.4
SRRM4-201ENST00000267260 ZNF677Q86XU0 584 aa12.55□□□□□ -0.4
SRRM4-201ENST00000267260 RERGLQ9H628 205 aa12.55□□□□□ -0.4
SRRM4-201ENST00000267260 KLHL11Q9NVR0 708 aa12.55□□□□□ -0.4
SRRM4-201ENST00000267260 ANKARQ7Z5J8 1434 aa12.55□□□□□ -0.4
SRRM4-201ENST00000267260 THRAP10827 490 aa12.54□□□□□ -0.4
SRRM4-201ENST00000267260 PSMC5P62195 406 aa12.54□□□□□ -0.4
SRRM4-201ENST00000267260 RASGRP2Q7LDG7 609 aa12.54□□□□□ -0.4
SRRM4-201ENST00000267260 BAIAP3O94812 1187 aa12.54□□□□□ -0.4
SRRM4-201ENST00000267260 FAM58BPP0C7Q3 252 aa12.54□□□□□ -0.4
SRRM4-201ENST00000267260 CSNK2BP67870 215 aa12.54□□□□□ -0.4
SRRM4-201ENST00000267260 ALFQ53S48 1182 aa12.54□□□□□ -0.4
SRRM4-201ENST00000267260 CDC73Q6P1J9 531 aa12.54□□□□□ -0.4
SRRM4-201ENST00000267260 SIX5Q8N196 739 aa12.54□□□□□ -0.4
SRRM4-201ENST00000267260 CACTIN-AS1Q8N1I8 211 aa12.54□□□□□ -0.4
SRRM4-201ENST00000267260 C10orf53Q8N6V4 93 aa12.54□□□□□ -0.4
SRRM4-201ENST00000267260 VCPKMTQ9H867 229 aa12.54□□□□□ -0.4
SRRM4-201ENST00000267260 ZNF624Q9P2J8 865 aaPredicted RBP12.54□□□□□ -0.4
SRRM4-201ENST00000267260 GTF2A1LQ9UNN4 478 aa12.54□□□□□ -0.4
SRRM4-201ENST00000267260 SLCO1B7G3V0H7 640 aa12.54□□□□□ -0.4
SRRM4-201ENST00000267260 ADORA2BP29275 332 aa12.54□□□□□ -0.4
SRRM4-201ENST00000267260 JADE3Q92613 823 aa12.54□□□□□ -0.4
SRRM4-201ENST00000267260 LXNQ9BS40 222 aa12.54□□□□□ -0.4
SRRM4-201ENST00000267260 TMEM79Q9BSE2 394 aa12.54□□□□□ -0.4
SRRM4-201ENST00000267260 THUMPD3Q9BV44 507 aaKnown RBP12.54□□□□□ -0.4
SRRM4-201ENST00000267260 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.54□□□□□ -0.4
SRRM4-201ENST00000267260 ERVV-1B6SEH8 477 aa12.54□□□□□ -0.4
SRRM4-201ENST00000267260 NCK2O43639 380 aa12.54□□□□□ -0.4
SRRM4-201ENST00000267260 AHCYL1O43865 530 aa12.54□□□□□ -0.4
SRRM4-201ENST00000267260 CPB1P15086 417 aa12.54□□□□□ -0.4
SRRM4-201ENST00000267260 E2F7Q96AV8 911 aa12.54□□□□□ -0.4
SRRM4-201ENST00000267260 LBHD1Q9BQE6 289 aaPredicted RBP12.54□□□□□ -0.4
SRRM4-201ENST00000267260 CD4P01730 458 aa12.54□□□□□ -0.4
SRRM4-201ENST00000267260 ALOX15P16050 662 aaPredicted RBP12.54□□□□□ -0.4
SRRM4-201ENST00000267260 FDFT1P37268 417 aa12.54□□□□□ -0.4
SRRM4-201ENST00000267260 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.54□□□□□ -0.4
SRRM4-201ENST00000267260 STARD13Q9Y3M8 1113 aa12.54□□□□□ -0.4
SRRM4-201ENST00000267260 DGKIO75912 1065 aa12.54□□□□□ -0.4
SRRM4-201ENST00000267260 PGM3O95394 542 aa12.54□□□□□ -0.4
SRRM4-201ENST00000267260 CALB2P22676 271 aa12.54□□□□□ -0.4
SRRM4-201ENST00000267260 CLEC16AQ2KHT3 1053 aa12.54□□□□□ -0.4
SRRM4-201ENST00000267260 FBXO42Q6P3S6 717 aa12.54□□□□□ -0.4
SRRM4-201ENST00000267260 HS6ST3Q8IZP7 471 aa12.54□□□□□ -0.4
SRRM4-201ENST00000267260 SLC38A7Q9NVC3 462 aa12.54□□□□□ -0.4
SRRM4-201ENST00000267260 BARHL2Q9NY43 387 aa12.54□□□□□ -0.4
SRRM4-201ENST00000267260 COMMD9Q9P000 198 aa12.54□□□□□ -0.4
SRRM4-201ENST00000267260 H3BMM5 538 aa12.53□□□□□ -0.4
SRRM4-201ENST00000267260 PCNX4Q63HM2 1172 aa12.53□□□□□ -0.4
SRRM4-201ENST00000267260 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.53□□□□□ -0.4
SRRM4-201ENST00000267260 RTKN2Q8IZC4 609 aa12.53□□□□□ -0.4
SRRM4-201ENST00000267260 VPS33AQ96AX1 596 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms