RNA–Protein interactions for RNA: ENST00000266679.8

CPSF6-201, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 1 (best) BASIC

Gene CPSF6, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-201ENST00000266679 SDCBP2Q9H190 292 aa13.59□□□□□ -0.23
CPSF6-201ENST00000266679 SMARCAD1Q9H4L7 1026 aa13.59□□□□□ -0.23
CPSF6-201ENST00000266679 CCDC134Q9H6E4 229 aa13.59□□□□□ -0.23
CPSF6-201ENST00000266679 SMYD3Q9H7B4 428 aa13.59□□□□□ -0.23
CPSF6-201ENST00000266679 DDX56Q9NY93 547 aaKnown RBP13.59□□□□□ -0.23
CPSF6-201ENST00000266679 SIX4Q9UIU6 781 aa13.59□□□□□ -0.23
CPSF6-201ENST00000266679 DNAJC25-GNG10A0A024R161 153 aa13.59□□□□□ -0.23
CPSF6-201ENST00000266679 BTBD19C9JJ37 291 aa13.59□□□□□ -0.23
CPSF6-201ENST00000266679 HBP1O60381 514 aa13.59□□□□□ -0.23
CPSF6-201ENST00000266679 EIF4BP23588 611 aaKnown RBP13.59□□□□□ -0.23
CPSF6-201ENST00000266679 CDKN2BP42772 138 aa13.59□□□□□ -0.23
CPSF6-201ENST00000266679 MAGEA4P43358 317 aa13.59□□□□□ -0.23
CPSF6-201ENST00000266679 DYNLT1P63172 113 aa13.59□□□□□ -0.23
CPSF6-201ENST00000266679 GPS1Q13098 491 aa13.59□□□□□ -0.23
CPSF6-201ENST00000266679 PPIL2Q13356 520 aa13.59□□□□□ -0.23
CPSF6-201ENST00000266679 TFDP3Q5H9I0 405 aa13.59□□□□□ -0.23
CPSF6-201ENST00000266679 ZNF667Q5HYK9 610 aa13.59□□□□□ -0.23
CPSF6-201ENST00000266679 ELAC2Q9BQ52 826 aaKnown RBP13.59□□□□□ -0.23
CPSF6-201ENST00000266679 HMGXB4Q9UGU5 601 aa13.59□□□□□ -0.23
CPSF6-201ENST00000266679 KIAA0100Q14667 2235 aaKnown RBP13.58□□□□□ -0.23
CPSF6-201ENST00000266679 ASAP2O43150 1006 aa13.58□□□□□ -0.24
CPSF6-201ENST00000266679 IL18RAPO95256 599 aa13.58□□□□□ -0.24
CPSF6-201ENST00000266679 C22orf31O95567 290 aa13.58□□□□□ -0.24
CPSF6-201ENST00000266679 IQCF3P0C7M6 154 aa13.58□□□□□ -0.24
CPSF6-201ENST00000266679 RFC1P35251 1148 aaPredicted RBP13.58□□□□□ -0.24
CPSF6-201ENST00000266679 VCPP55072 806 aaKnown RBP13.58□□□□□ -0.24
CPSF6-201ENST00000266679 COPS2P61201 443 aa13.58□□□□□ -0.24
CPSF6-201ENST00000266679 PSMC1P62191 440 aaKnown RBP13.58□□□□□ -0.24
CPSF6-201ENST00000266679 MLLT1Q03111 559 aaPredicted RBP13.58□□□□□ -0.24
CPSF6-201ENST00000266679 TMED2Q15363 201 aa13.58□□□□□ -0.24
CPSF6-201ENST00000266679 WDR72Q3MJ13 1102 aa13.58□□□□□ -0.24
CPSF6-201ENST00000266679 HP1BP3Q5SSJ5 553 aaPredicted RBP13.58□□□□□ -0.24
CPSF6-201ENST00000266679 GJC2Q5T442 439 aaPredicted RBP13.58□□□□□ -0.24
CPSF6-201ENST00000266679 NIPA2Q8N8Q9 360 aa13.58□□□□□ -0.24
CPSF6-201ENST00000266679 C1orf127Q8N9H9 656 aa13.58□□□□□ -0.24
CPSF6-201ENST00000266679 CCHCR1Q8TD31 782 aa13.58□□□□□ -0.24
CPSF6-201ENST00000266679 NSRP1Q9H0G5 558 aaKnown RBP13.58□□□□□ -0.24
CPSF6-201ENST00000266679 RNPEPQ9H4A4 650 aa13.58□□□□□ -0.24
CPSF6-201ENST00000266679 ACTR5Q9H9F9 607 aaPredicted RBP13.58□□□□□ -0.24
CPSF6-201ENST00000266679 METTL5Q9NRN9 209 aaKnown RBP13.58□□□□□ -0.24
CPSF6-201ENST00000266679 SAMD15Q9P1V8 674 aa13.58□□□□□ -0.24
CPSF6-201ENST00000266679 STRIP2Q9ULQ0 834 aa13.58□□□□□ -0.24
CPSF6-201ENST00000266679 TNFSF13BQ9Y275 285 aa13.58□□□□□ -0.24
CPSF6-201ENST00000266679 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.58□□□□□ -0.24
CPSF6-201ENST00000266679 PLXNA1Q9UIW2 1896 aa13.58□□□□□ -0.24
CPSF6-201ENST00000266679 LACTBL1A8MY62 500 aa13.58□□□□□ -0.24
CPSF6-201ENST00000266679 SGK1O00141 431 aa13.58□□□□□ -0.24
CPSF6-201ENST00000266679 CXCL11O14625 94 aa13.58□□□□□ -0.24
CPSF6-201ENST00000266679 MED7O43513 233 aa13.58□□□□□ -0.24
CPSF6-201ENST00000266679 ITGB3P05106 788 aa13.58□□□□□ -0.24
CPSF6-201ENST00000266679 KRT3P12035 628 aa13.58□□□□□ -0.24
CPSF6-201ENST00000266679 BRAFP15056 766 aa13.58□□□□□ -0.24
CPSF6-201ENST00000266679 POLR2BP30876 1174 aaKnown RBP13.58□□□□□ -0.24
CPSF6-201ENST00000266679 PTPN7P35236 360 aa13.58□□□□□ -0.24
CPSF6-201ENST00000266679 RAD23BP54727 409 aa13.58□□□□□ -0.24
CPSF6-201ENST00000266679 ADCY1Q08828 1119 aa13.58□□□□□ -0.24
CPSF6-201ENST00000266679 JADE1Q6IE81 842 aa13.58□□□□□ -0.24
CPSF6-201ENST00000266679 DRICH1Q6PGQ1 229 aaPredicted RBP13.58□□□□□ -0.24
CPSF6-201ENST00000266679 EMC1Q8N766 993 aa13.58□□□□□ -0.24
CPSF6-201ENST00000266679 GDAP1Q8TB36 358 aa13.58□□□□□ -0.24
CPSF6-201ENST00000266679 CPB2Q96IY4 423 aa13.58□□□□□ -0.24
CPSF6-201ENST00000266679 TWNKQ96RR1 684 aa13.58□□□□□ -0.24
CPSF6-201ENST00000266679 TMEM121Q9BTD3 319 aa13.58□□□□□ -0.24
CPSF6-201ENST00000266679 SYNCQ9H7C4 482 aa13.58□□□□□ -0.24
CPSF6-201ENST00000266679 LGALS13Q9UHV8 139 aa13.58□□□□□ -0.24
CPSF6-201ENST00000266679 DNM1LO00429 736 aa13.57□□□□□ -0.24
CPSF6-201ENST00000266679 TCEA3O75764 348 aa13.57□□□□□ -0.24
CPSF6-201ENST00000266679 IFNB1P01574 187 aa13.57□□□□□ -0.24
CPSF6-201ENST00000266679 ERBB2P04626 1255 aa13.57□□□□□ -0.24
CPSF6-201ENST00000266679 STAG3L1P0CL83 205 aa13.57□□□□□ -0.24
CPSF6-201ENST00000266679 PECAM1P16284 738 aaPredicted RBP13.57□□□□□ -0.24
CPSF6-201ENST00000266679 OSBPP22059 807 aa13.57□□□□□ -0.24
CPSF6-201ENST00000266679 PLCB3Q01970 1234 aa13.57□□□□□ -0.24
CPSF6-201ENST00000266679 SLC25A11Q02978 314 aaKnown RBP13.57□□□□□ -0.24
CPSF6-201ENST00000266679 SNAPC2Q13487 334 aa13.57□□□□□ -0.24
CPSF6-201ENST00000266679 MOGSQ13724 837 aa13.57□□□□□ -0.24
CPSF6-201ENST00000266679 TTLL4Q14679 1199 aa13.57□□□□□ -0.24
CPSF6-201ENST00000266679 STAT4Q14765 748 aa13.57□□□□□ -0.24
CPSF6-201ENST00000266679 FASTKD3Q14CZ7 662 aaKnown RBP13.57□□□□□ -0.24
CPSF6-201ENST00000266679 OASLQ15646 514 aaKnown RBP13.57□□□□□ -0.24
CPSF6-201ENST00000266679 KCNT1Q5JUK3 1230 aa13.57□□□□□ -0.24
CPSF6-201ENST00000266679 FBXO46Q6PJ61 603 aaPredicted RBP13.57□□□□□ -0.24
CPSF6-201ENST00000266679 CAPN12Q6ZSI9 719 aa13.57□□□□□ -0.24
CPSF6-201ENST00000266679 SRRM1Q8IYB3 904 aaKnown RBP13.57□□□□□ -0.24
CPSF6-201ENST00000266679 ANKS4BQ8N8V4 417 aa13.57□□□□□ -0.24
CPSF6-201ENST00000266679 CPXM1Q96SM3 734 aa13.57□□□□□ -0.24
CPSF6-201ENST00000266679 CCDC77Q9BR77 488 aa13.57□□□□□ -0.24
CPSF6-201ENST00000266679 BCO2Q9BYV7 579 aa13.57□□□□□ -0.24
CPSF6-201ENST00000266679 ARHGAP39Q9C0H5 1083 aa13.57□□□□□ -0.24
CPSF6-201ENST00000266679 C10orf88Q9H8K7 445 aa13.57□□□□□ -0.24
CPSF6-201ENST00000266679 TPX2Q9ULW0 747 aaKnown RBP13.57□□□□□ -0.24
CPSF6-201ENST00000266679 NAALADL1Q9UQQ1 740 aa13.57□□□□□ -0.24
CPSF6-201ENST00000266679 C3orf70A6NLC5 250 aaPredicted RBP13.56□□□□□ -0.24
CPSF6-201ENST00000266679 SIGLEC16A6NMB1 481 aa13.56□□□□□ -0.24
CPSF6-201ENST00000266679 TCP11X1B4DZS4 312 aa13.56□□□□□ -0.24
CPSF6-201ENST00000266679 GH1P01241 217 aa13.56□□□□□ -0.24
CPSF6-201ENST00000266679 IL1R2P27930 398 aa13.56□□□□□ -0.24
CPSF6-201ENST00000266679 PHKA2P46019 1235 aa13.56□□□□□ -0.24
CPSF6-201ENST00000266679 SLC26A2P50443 739 aa13.56□□□□□ -0.24
CPSF6-201ENST00000266679 SP3Q02447 781 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms